printf ' ' | fink --no-use-binary-dist --yes --build-as-nobody rebuild bioperl-pm5124 2>&1 The package 'bioperl-pm5124' will be built without being installed. Reading build dependency for bioperl-pm5124-1.6.901-2... Reading dependency for bioperl-pm5124-1.6.901-2... Reading build conflict for bioperl-pm5124-1.6.901-2... fink needs help picking an alternative to satisfy a virtual dependency. The candidates: (1) soap-lite-ssl-pm5124: Simple Object Access Protocol (SOAP) modules (2) soap-lite-pm5124: Simple Object Access Protocol (SOAP) modules Pick one: [2] (assuming default) The package 'perl5124-core' will be installed. Reading dependency for perl5124-core-5.12.4-103... Reading runtime dependency for perl5124-core-5.12.4-103... The package 'cpan-pm5124' will be installed. Reading dependency for cpan-pm5124-2.05-1... Reading runtime dependency for cpan-pm5124-2.05-1... The package 'module-build-pm5124' will be installed. Reading dependency for module-build-pm5124-0.42.06-1... Reading runtime dependency for module-build-pm5124-0.42.06-1... The package 'test-harness-pm5124' will be installed. Reading dependency for test-harness-pm5124-3.30-1... Reading runtime dependency for test-harness-pm5124-3.30-1... The package 'array-compare-pm5124' will be installed. Reading dependency for array-compare-pm5124-2.02-1... Reading runtime dependency for array-compare-pm5124-2.02-1... The package 'clone-pm5124' will be installed. Reading dependency for clone-pm5124-0.36-1... Reading runtime dependency for clone-pm5124-0.36-1... The package 'data-stag-pm5124' will be installed. Reading dependency for data-stag-pm5124-0.14-1... Reading runtime dependency for data-stag-pm5124-0.14-1... The package 'extutils-manifest-pm' will be installed. Reading dependency for extutils-manifest-pm-1.63-1... Reading runtime dependency for extutils-manifest-pm-1.63-1... The package 'gd-pm5124' will be installed. Reading dependency for gd-pm5124-2.50-1... Reading runtime dependency for gd-pm5124-2.50-1... The package 'gd-svg-pm5124' will be installed. Reading dependency for gd-svg-pm5124-0.33-1... Reading runtime dependency for gd-svg-pm5124-0.33-1... The package 'graph-pm' will be installed. Reading dependency for graph-pm-0.96-1... Reading runtime dependency for graph-pm-0.96-1... The package 'html-parser-pm5124' will be installed. Reading dependency for html-parser-pm5124-3.71-1... Reading runtime dependency for html-parser-pm5124-3.71-1... The package 'io-string-pm' will be installed. Reading dependency for io-string-pm-1.08-1... Reading runtime dependency for io-string-pm-1.08-1... The package 'io-stringy-pm' will be installed. Reading dependency for io-stringy-pm-2.110-1022... Reading runtime dependency for io-stringy-pm-2.110-1022... The package 'libwww-pm5124' will be installed. Reading dependency for libwww-pm5124-6.07-1... Reading runtime dependency for libwww-pm5124-6.07-1... The package 'libxml-pm5124' will be installed. Reading dependency for libxml-pm5124-0.08-2... Reading runtime dependency for libxml-pm5124-0.08-2... The package 'set-scalar-pm' will be installed. Reading dependency for set-scalar-pm-1.27-1... Reading runtime dependency for set-scalar-pm-1.27-1... The package 'soap-lite-pm5124' will be installed. Reading dependency for soap-lite-pm5124-0.712-6... Reading runtime dependency for soap-lite-pm5124-0.712-6... The package 'spreadsheet-parseexcel-pm5124' will be installed. Reading dependency for spreadsheet-parseexcel-pm5124-0.59-1... Reading runtime dependency for spreadsheet-parseexcel-pm5124-0.59-1... The package 'spreadsheet-writeexcel-pm' will be installed. Reading dependency for spreadsheet-writeexcel-pm-2.40-1... Reading runtime dependency for spreadsheet-writeexcel-pm-2.40-1... The package 'svg-pm' will be installed. Reading dependency for svg-pm-2.59-2... Reading runtime dependency for svg-pm-2.59-2... The package 'text-shellwords-pm' will be installed. Reading dependency for text-shellwords-pm-1.08-1... Reading runtime dependency for text-shellwords-pm-1.08-1... The package 'uri-pm5124' will be installed. Reading dependency for uri-pm5124-1.64-1... Reading runtime dependency for uri-pm5124-1.64-1... The package 'xml-dom-pm5124' will be installed. Reading dependency for xml-dom-pm5124-1.44-2... Reading runtime dependency for xml-dom-pm5124-1.44-2... The package 'xml-node-pm5124' will be installed. Reading dependency for xml-node-pm5124-0.11-104... Reading runtime dependency for xml-node-pm5124-0.11-104... The package 'xml-parser-pm5124' will be installed. Reading dependency for xml-parser-pm5124-2.41-2... Reading runtime dependency for xml-parser-pm5124-2.41-2... The package 'xml-sax-pm5124' will be installed. Reading dependency for xml-sax-pm5124-0.99-3... Reading runtime dependency for xml-sax-pm5124-0.99-3... The package 'xml-sax-writer-pm5124' will be installed. Reading dependency for xml-sax-writer-pm5124-0.54-1... Reading runtime dependency for xml-sax-writer-pm5124-0.54-1... The package 'xml-twig-pm5124' will be installed. Reading dependency for xml-twig-pm5124-3.48-1... Reading runtime dependency for xml-twig-pm5124-3.48-1... The package 'xml-writer-pm' will be installed. Reading dependency for xml-writer-pm-0.624-1... Reading runtime dependency for xml-writer-pm-0.624-1... The package 'compress-bzip2-pm5124' will be installed. Reading dependency for compress-bzip2-pm5124-2.16-1... Reading runtime dependency for compress-bzip2-pm5124-2.16-1... The package 'cpan-meta-pm5124' will be installed. Reading dependency for cpan-meta-pm5124-2.141520-1... Reading runtime dependency for cpan-meta-pm5124-2.141520-1... The package 'cpan-meta-requirements-pm5124' will be installed. Reading dependency for cpan-meta-requirements-pm5124-2.125-1... Reading runtime dependency for cpan-meta-requirements-pm5124-2.125-1... The package 'cpan-meta-yaml-pm' will be installed. Reading dependency for cpan-meta-yaml-pm-0.012-1... Reading runtime dependency for cpan-meta-yaml-pm-0.012-1... The package 'file-homedir-pm5124' will be installed. Reading dependency for file-homedir-pm5124-1.00-1... Reading runtime dependency for file-homedir-pm5124-1.00-1... The package 'json-pp-pm' will be installed. Reading dependency for json-pp-pm-2.27.203-2... Reading runtime dependency for json-pp-pm-2.27.203-2... The package 'module-signature-pm5124' will be installed. Reading dependency for module-signature-pm5124-0.73-1... Reading runtime dependency for module-signature-pm5124-0.73-1... The package 'parse-cpan-meta-pm' will be installed. Reading dependency for parse-cpan-meta-pm-1.44.14-1... Reading runtime dependency for parse-cpan-meta-pm-1.44.14-1... The package 'text-glob-pm' will be installed. Reading dependency for text-glob-pm-0.09-1... Reading runtime dependency for text-glob-pm-0.09-1... The package 'extutils-cbuilder-pm' will be installed. Reading dependency for extutils-cbuilder-pm-0.27.03-2... Reading runtime dependency for extutils-cbuilder-pm-0.27.03-2... The package 'extutils-install-pm' will be installed. Reading dependency for extutils-install-pm-1.54-1... Reading runtime dependency for extutils-install-pm-1.54-1... The package 'extutils-parsexs-pm' will be installed. Reading dependency for extutils-parsexs-pm-3.24-1... Reading runtime dependency for extutils-parsexs-pm-3.24-1... The package 'module-metadata-pm5124' will be installed. Reading dependency for module-metadata-pm5124-1.000024-1... Reading runtime dependency for module-metadata-pm5124-1.000024-1... The package 'par-dist-pm' will be installed. Reading dependency for par-dist-pm-0.49-1... Reading runtime dependency for par-dist-pm-0.49-1... The package 'perl-ostype-pm5124' will be installed. Reading dependency for perl-ostype-pm5124-1.007-1... Reading runtime dependency for perl-ostype-pm5124-1.007-1... The package 'pod-readme-pm' will be installed. Reading dependency for pod-readme-pm-0.11-1... Reading runtime dependency for pod-readme-pm-0.11-1... The package 'software-license-pm5124' will be installed. Reading dependency for software-license-pm5124-0.103008-1... Reading runtime dependency for software-license-pm5124-0.103008-1... The package 'version-pm5124' will be installed. Reading dependency for version-pm5124-0.99.08-1... Reading runtime dependency for version-pm5124-0.99.08-1... The package 'moose-pm5124' will be installed. Reading dependency for moose-pm5124-2.1209-1... Reading runtime dependency for moose-pm5124-2.1209-1... The package 'json-pm5124' will be installed. Reading dependency for json-pm5124-2.90-1... Reading runtime dependency for json-pm5124-2.90-1... The package 'mldbm-pm' will be installed. Reading dependency for mldbm-pm-2.01-4... Reading runtime dependency for mldbm-pm-2.01-4... The package 'tk-pm5124' will be installed. Reading dependency for tk-pm5124-804.031-2... Reading runtime dependency for tk-pm5124-804.031-2... The package 'xml-libxslt-pm5124' will be installed. Reading dependency for xml-libxslt-pm5124-1.89-1... Reading runtime dependency for xml-libxslt-pm5124-1.89-1... The package 'gd3-shlibs' will be installed. Reading dependency for gd3-shlibs-2.1.0-1... Reading runtime dependency for gd3-shlibs-2.1.0-1... The package 'heap-pm' will be installed. Reading dependency for heap-pm-0.80-1... Reading runtime dependency for heap-pm-0.80-1... The package 'html-tagset-pm' will be installed. Reading dependency for html-tagset-pm-3.20-1... Reading runtime dependency for html-tagset-pm-3.20-1... The package 'authen-ntlm-pm5124' will be installed. Reading dependency for authen-ntlm-pm5124-1.09-1... Reading runtime dependency for authen-ntlm-pm5124-1.09-1... The package 'encode-locale-pm5124' will be installed. Reading dependency for encode-locale-pm5124-1.03-1... Reading runtime dependency for encode-locale-pm5124-1.03-1... The package 'encode-pm5124' will be installed. Reading dependency for encode-pm5124-2.60-1... Reading runtime dependency for encode-pm5124-2.60-1... The package 'file-listing-pm5124' will be installed. Reading dependency for file-listing-pm5124-6.04-1... Reading runtime dependency for file-listing-pm5124-6.04-1... The package 'http-cookies-pm5124' will be installed. Reading dependency for http-cookies-pm5124-6.01-1... Reading runtime dependency for http-cookies-pm5124-6.01-1... The package 'http-daemon-pm5124' will be installed. Reading dependency for http-daemon-pm5124-6.01-1... Reading runtime dependency for http-daemon-pm5124-6.01-1... The package 'http-date-pm5124' will be installed. Reading dependency for http-date-pm5124-6.02-1... Reading runtime dependency for http-date-pm5124-6.02-1... The package 'http-message-pm5124' will be installed. Reading dependency for http-message-pm5124-6.06-1... Reading runtime dependency for http-message-pm5124-6.06-1... The package 'http-negotiate-pm5124' will be installed. Reading dependency for http-negotiate-pm5124-6.01-1... Reading runtime dependency for http-negotiate-pm5124-6.01-1... The package 'lwp-mediatypes-pm5124' will be installed. Reading dependency for lwp-mediatypes-pm5124-6.02-1... Reading runtime dependency for lwp-mediatypes-pm5124-6.02-1... The package 'net-http-pm5124' will be installed. Reading dependency for net-http-pm5124-6.06-1... Reading runtime dependency for net-http-pm5124-6.06-1... The package 'www-robotrules-pm5124' will be installed. Reading dependency for www-robotrules-pm5124-6.02-1... Reading runtime dependency for www-robotrules-pm5124-6.02-1... The package 'class-inspector-pm5124' will be installed. Reading dependency for class-inspector-pm5124-1.28-1... Reading runtime dependency for class-inspector-pm5124-1.28-1... The package 'constant-pm' will be installed. Reading dependency for constant-pm-1.27-1... Reading runtime dependency for constant-pm-1.27-1... The package 'data-uuid-pm5124' will be installed. Reading dependency for data-uuid-pm5124-1.219-1... Reading runtime dependency for data-uuid-pm5124-1.219-1... The package 'dime-tools-pm5124' will be installed. Reading dependency for dime-tools-pm5124-0.03-1... Reading runtime dependency for dime-tools-pm5124-0.03-1... The package 'fcgi-pm5124' will be installed. Reading dependency for fcgi-pm5124-0.74-1... Reading runtime dependency for fcgi-pm5124-0.74-1... The package 'io-compress-pm5124' will be installed. Reading dependency for io-compress-pm5124-2.063-1... Reading runtime dependency for io-compress-pm5124-2.063-1... The package 'mime-lite-pm5124' will be installed. Reading dependency for mime-lite-pm5124-3.030-2... Reading runtime dependency for mime-lite-pm5124-3.030-2... The package 'mime-tools-pm5124' will be installed. Reading dependency for mime-tools-pm5124-5.505-1... Reading runtime dependency for mime-tools-pm5124-5.505-1... The package 'task-weaken-pm5124' will be installed. Reading dependency for task-weaken-pm5124-1.04-1... Reading runtime dependency for task-weaken-pm5124-1.04-1... The package 'crypt-rc4-pm' will be installed. Reading dependency for crypt-rc4-pm-2.02-1... Reading runtime dependency for crypt-rc4-pm-2.02-1... The package 'digest-perl-md5-pm' will be installed. Reading dependency for digest-perl-md5-pm-1.9-1... Reading runtime dependency for digest-perl-md5-pm-1.9-1... The package 'ole-storagelite-pm' will be installed. Reading dependency for ole-storagelite-pm-0.19-1... Reading runtime dependency for ole-storagelite-pm-0.19-1... The package 'unicode-map-pm5124' will be installed. Reading dependency for unicode-map-pm5124-0.112-16... Reading runtime dependency for unicode-map-pm5124-0.112-16... The package 'rec-descent-pm' will be installed. Reading dependency for rec-descent-pm-1.96.7009-1... Reading runtime dependency for rec-descent-pm-1.96.7009-1... The package 'xml-regexp-pm' will be installed. Reading dependency for xml-regexp-pm-0.04-1... Reading runtime dependency for xml-regexp-pm-0.04-1... The package 'expat1-shlibs' will be installed. Reading dependency for expat1-shlibs-2.1.0-1... Reading runtime dependency for expat1-shlibs-2.1.0-1... The package 'xml-namespacesupport-pm' will be installed. Reading dependency for xml-namespacesupport-pm-1.11-1... Reading runtime dependency for xml-namespacesupport-pm-1.11-1... The package 'xml-sax-base-pm' will be installed. Reading dependency for xml-sax-base-pm-1.08-1... Reading runtime dependency for xml-sax-base-pm-1.08-1... The package 'xml-filter-buffertext-pm5124' will be installed. Reading dependency for xml-filter-buffertext-pm5124-1.01-4... Reading runtime dependency for xml-filter-buffertext-pm5124-1.01-4... The package 'html-entities-numbered-pm' will be installed. Reading dependency for html-entities-numbered-pm-0.04-1... Reading runtime dependency for html-entities-numbered-pm-0.04-1... The package 'html-tree-pm5124' will be installed. Reading dependency for html-tree-pm5124-5.03-1... Reading runtime dependency for html-tree-pm5124-5.03-1... The package 'html-tidy-pm5124' will be installed. Reading dependency for html-tidy-pm5124-1.56-1... Reading runtime dependency for html-tidy-pm5124-1.56-1... The package 'scalar-list-utils-pm5124' will be installed. Reading dependency for scalar-list-utils-pm5124-1.35-1... Reading runtime dependency for scalar-list-utils-pm5124-1.35-1... The package 'text-iconv-pm5124' will be installed. Reading dependency for text-iconv-pm5124-1.7-3... Reading runtime dependency for text-iconv-pm5124-1.7-3... The package 'tie-ixhash-pm' will be installed. Reading dependency for tie-ixhash-pm-1.23-1... Reading runtime dependency for tie-ixhash-pm-1.23-1... The package 'xml-xpathengine-pm' will be installed. Reading dependency for xml-xpathengine-pm-0.14-1... Reading runtime dependency for xml-xpathengine-pm-0.14-1... The package 'exporter-pm' will be installed. Reading dependency for exporter-pm-5.68-1... Reading runtime dependency for exporter-pm-5.68-1... The package 'file-which-pm5124' will be installed. Reading dependency for file-which-pm5124-1.09-6... Reading runtime dependency for file-which-pm5124-1.09-6... The package 'mac-systemdirectory-pm5124' will be installed. Reading dependency for mac-systemdirectory-pm5124-0.06-1... Reading runtime dependency for mac-systemdirectory-pm5124-0.06-1... The package 'digest-sha1-pm5124' will be installed. Reading dependency for digest-sha1-pm5124-2.13-1... Reading runtime dependency for digest-sha1-pm5124-2.13-1... The package 'gnupg-unified' will be installed. Reading dependency for gnupg-unified-1.4.16-1... Reading runtime dependency for gnupg-unified-1.4.16-1... The package 'podlators-pm' will be installed. Reading dependency for podlators-pm-2.5.3-1... Reading runtime dependency for podlators-pm-2.5.3-1... The package 'regexp-common-pm' will be installed. Reading dependency for regexp-common-pm-2013031301-1... Reading runtime dependency for regexp-common-pm-2013031301-1... The package 'class-load-pm5124' will be installed. Reading dependency for class-load-pm5124-0.20-1... Reading runtime dependency for class-load-pm5124-0.20-1... The package 'class-load-xs-pm5124' will be installed. Reading dependency for class-load-xs-pm5124-0.06-1... Reading runtime dependency for class-load-xs-pm5124-0.06-1... The package 'data-optlist-pm5124' will be installed. Reading dependency for data-optlist-pm5124-0.109-1... Reading runtime dependency for data-optlist-pm5124-0.109-1... The package 'devel-globaldestruction-pm5124' will be installed. Reading dependency for devel-globaldestruction-pm5124-0.12-1... Reading runtime dependency for devel-globaldestruction-pm5124-0.12-1... The package 'eval-closure-pm5124' will be installed. Reading dependency for eval-closure-pm5124-0.11-1... Reading runtime dependency for eval-closure-pm5124-0.11-1... The package 'list-moreutils-pm5124' will be installed. Reading dependency for list-moreutils-pm5124-0.33-1... Reading runtime dependency for list-moreutils-pm5124-0.33-1... The package 'module-runtime-pm5124' will be installed. Reading dependency for module-runtime-pm5124-0.014-1... Reading runtime dependency for module-runtime-pm5124-0.014-1... The package 'mro-compat-pm5124' will be installed. Reading dependency for mro-compat-pm5124-0.12-1... Reading runtime dependency for mro-compat-pm5124-0.12-1... The package 'package-deprecationmanager-pm5124' will be installed. Reading dependency for package-deprecationmanager-pm5124-0.13-1... Reading runtime dependency for package-deprecationmanager-pm5124-0.13-1... The package 'package-stash-pm5124' will be installed. Reading dependency for package-stash-pm5124-0.36-1... Reading runtime dependency for package-stash-pm5124-0.36-1... The package 'package-stash-xs-pm5124' will be installed. Reading dependency for package-stash-xs-pm5124-0.28-1... Reading runtime dependency for package-stash-xs-pm5124-0.28-1... The package 'params-util-pm5124' will be installed. Reading dependency for params-util-pm5124-1.07-1... Reading runtime dependency for params-util-pm5124-1.07-1... The package 'sub-exporter-pm5124' will be installed. Reading dependency for sub-exporter-pm5124-0.987-1... Reading runtime dependency for sub-exporter-pm5124-0.987-1... The package 'sub-name-pm5124' will be installed. Reading dependency for sub-name-pm5124-0.05-1... Reading runtime dependency for sub-name-pm5124-0.05-1... The package 'try-tiny-pm' will be installed. Reading dependency for try-tiny-pm-0.22-1... Reading runtime dependency for try-tiny-pm-0.22-1... The package 'json-xs-pm5124' will be installed. Reading dependency for json-xs-pm5124-3.01-1... Reading runtime dependency for json-xs-pm5124-3.01-1... The package 'freezethaw-pm' will be installed. Reading dependency for freezethaw-pm-0.5001-1... Reading runtime dependency for freezethaw-pm-0.5001-1... The package 'fontconfig2-shlibs' will be installed. Reading dependency for fontconfig2-shlibs-2.10.2-1... Reading runtime dependency for fontconfig2-shlibs-2.10.2-1... The package 'libjpeg9-shlibs' will be installed. Reading dependency for libjpeg9-shlibs-9a-1... Reading runtime dependency for libjpeg9-shlibs-9a-1... The package 'libpng16-shlibs' will be installed. Reading dependency for libpng16-shlibs-1.6.12-1... Reading runtime dependency for libpng16-shlibs-1.6.12-1... The package 'xft2-shlibs' will be installed. Reading dependency for xft2-shlibs-2.2.0-3... Reading runtime dependency for xft2-shlibs-2.2.0-3... The package 'libxml2-shlibs' will be installed. Reading dependency for libxml2-shlibs-2.9.1-3... Reading runtime dependency for libxml2-shlibs-2.9.1-3... The package 'libxslt-shlibs' will be installed. Reading dependency for libxslt-shlibs-1.1.28-2... Reading runtime dependency for libxslt-shlibs-1.1.28-2... The package 'xml-libxml-pm5124' will be installed. Reading dependency for xml-libxml-pm5124-2.0111-1... Reading runtime dependency for xml-libxml-pm5124-2.0111-1... The package 'freetype219-shlibs' will be installed. Reading dependency for freetype219-shlibs-2.4.12-1... Reading runtime dependency for freetype219-shlibs-2.4.12-1... The package 'libtiff5-shlibs' will be installed. Reading dependency for libtiff5-shlibs-4.0.3-5... Reading runtime dependency for libtiff5-shlibs-4.0.3-5... The package 'digest-hmac-pm' will be installed. Reading dependency for digest-hmac-pm-1.03-1... Reading runtime dependency for digest-hmac-pm-1.03-1... The package 'time-date-pm' will be installed. Reading dependency for time-date-pm-1.16-1... Reading runtime dependency for time-date-pm-1.16-1... The package 'io-html-pm5124' will be installed. Reading dependency for io-html-pm5124-1.001-1... Reading runtime dependency for io-html-pm5124-1.001-1... The package 'io-socket-ssl-pm5124' will be installed. Reading dependency for io-socket-ssl-pm5124-1.997-1... Reading runtime dependency for io-socket-ssl-pm5124-1.997-1... The package 'compress-raw-bzip2-pm5124' will be installed. Reading dependency for compress-raw-bzip2-pm5124-2.063-1... Reading runtime dependency for compress-raw-bzip2-pm5124-2.063-1... The package 'compress-raw-zlib-pm5124' will be installed. Reading dependency for compress-raw-zlib-pm5124-2.063-1... Reading runtime dependency for compress-raw-zlib-pm5124-2.063-1... The package 'email-date-format-pm' will be installed. Reading dependency for email-date-format-pm-1.004-1... Reading runtime dependency for email-date-format-pm-1.004-1... The package 'mailtools-pm5124' will be installed. Reading dependency for mailtools-pm5124-2.13-1... Reading runtime dependency for mailtools-pm5124-2.13-1... The package 'mime-types-pm' will be installed. Reading dependency for mime-types-pm-2.04-2... Reading runtime dependency for mime-types-pm-2.04-2... The package 'unicode-string-pm5124' will be installed. Reading dependency for unicode-string-pm5124-2.09-11... Reading runtime dependency for unicode-string-pm5124-2.09-11... The package 'text-balanced-pm' will be installed. Reading dependency for text-balanced-pm-2.02-2... Reading runtime dependency for text-balanced-pm-2.02-2... The package 'libtidyp-shlibs' will be installed. Reading dependency for libtidyp-shlibs-1.04-1... Reading runtime dependency for libtidyp-shlibs-1.04-1... The package 'libcurl4-shlibs' will be installed. Reading dependency for libcurl4-shlibs-7.37.1-1+10.8... Reading runtime dependency for libcurl4-shlibs-7.37.1-1+10.8... The package 'libusb-shlibs' will be installed. Reading dependency for libusb-shlibs-0.1.12-1015... Reading runtime dependency for libusb-shlibs-0.1.12-1015... The package 'openldap24-shlibs' will be installed. Reading dependency for openldap24-shlibs-2.4.35-1... Reading runtime dependency for openldap24-shlibs-2.4.35-1... The package 'readline6-shlibs' will be installed. Reading dependency for readline6-shlibs-6.3.6-1... Reading runtime dependency for readline6-shlibs-6.3.6-1... The package 'module-implementation-pm5124' will be installed. Reading dependency for module-implementation-pm5124-0.06-1... Reading runtime dependency for module-implementation-pm5124-0.06-1... The package 'sub-install-pm5124' will be installed. Reading dependency for sub-install-pm5124-0.927-1... Reading runtime dependency for sub-install-pm5124-0.927-1... The package 'devel-globaldestruction-xs-pm5124' will be installed. Reading dependency for devel-globaldestruction-xs-pm5124-0.01-1... Reading runtime dependency for devel-globaldestruction-xs-pm5124-0.01-1... The package 'sub-exporter-progressive-pm5124' will be installed. Reading dependency for sub-exporter-progressive-pm5124-0.001011-1... Reading runtime dependency for sub-exporter-progressive-pm5124-0.001011-1... The package 'params-classify-pm5124' will be installed. Reading dependency for params-classify-pm5124-0.013-4... Reading runtime dependency for params-classify-pm5124-0.013-4... The package 'class-c3-pm5124' will be installed. Reading dependency for class-c3-pm5124-0.25-1... Reading runtime dependency for class-c3-pm5124-0.25-1... The package 'dist-checkconflicts-pm5124' will be installed. Reading dependency for dist-checkconflicts-pm5124-0.09-1... Reading runtime dependency for dist-checkconflicts-pm5124-0.09-1... The package 'package-generator-pm' will be installed. Reading dependency for package-generator-pm-1.106-1... Reading runtime dependency for package-generator-pm-1.106-1... The package 'common-sense-pm' will be installed. Reading dependency for common-sense-pm-3.72-1... Reading runtime dependency for common-sense-pm-3.72-1... The package 'types-serialiser-pm' will be installed. Reading dependency for types-serialiser-pm-0.03-1... Reading runtime dependency for types-serialiser-pm-0.03-1... The package 'fontconfig-config' will be installed. Reading dependency for fontconfig-config-2.10.2-1... Reading runtime dependency for fontconfig-config-2.10.2-1... The package 'liblzma5-shlibs' will be installed. Reading dependency for liblzma5-shlibs-5.0.5-2... Reading runtime dependency for liblzma5-shlibs-5.0.5-2... The package 'libjbig-shlibs' will be installed. Reading dependency for libjbig-shlibs-2.0-1... Reading runtime dependency for libjbig-shlibs-2.0-1... The package 'net-ssleay-pm5124' will be installed. Reading dependency for net-ssleay-pm5124-1.65-1... Reading runtime dependency for net-ssleay-pm5124-1.65-1... The package 'net-idn-encode-pm5124' will be installed. Reading dependency for net-idn-encode-pm5124-2.004-1... Reading runtime dependency for net-idn-encode-pm5124-2.004-1... The package 'mozilla-ca-pm' will be installed. Reading dependency for mozilla-ca-pm-20130114-1... Reading runtime dependency for mozilla-ca-pm-20130114-1... The package 'librtmp-shlibs' will be installed. Reading dependency for librtmp-shlibs-2.3-4... Reading runtime dependency for librtmp-shlibs-2.3-4... The package 'libssh2.1-shlibs' will be installed. Reading dependency for libssh2.1-shlibs-1.4.3-1... Reading runtime dependency for libssh2.1-shlibs-1.4.3-1... The package 'cyrus-sasl2-shlibs' will be installed. Reading dependency for cyrus-sasl2-shlibs-2.1.25-2... Reading runtime dependency for cyrus-sasl2-shlibs-2.1.25-2... The package 'db53-aes-shlibs' will be installed. Reading dependency for db53-aes-shlibs-5.3.21-2... Reading runtime dependency for db53-aes-shlibs-5.3.21-2... The package 'openssl100-shlibs' will be installed. Reading dependency for openssl100-shlibs-1.0.1h-1... Reading runtime dependency for openssl100-shlibs-1.0.1h-1... The package 'algorithm-c3-pm5124' will be installed. Reading dependency for algorithm-c3-pm5124-0.08-3... Reading runtime dependency for algorithm-c3-pm5124-0.08-3... The package 'unicode-normalize-pm5124' will be installed. Reading dependency for unicode-normalize-pm5124-1.18-1... Reading runtime dependency for unicode-normalize-pm5124-1.18-1... The following package will be rebuilt: bioperl-pm5124 The following 166 additional packages will be installed: algorithm-c3-pm5124 array-compare-pm5124 authen-ntlm-pm5124 class-c3-pm5124 class-inspector-pm5124 class-load-pm5124 class-load-xs-pm5124 clone-pm5124 common-sense-pm compress-bzip2-pm5124 compress-raw-bzip2-pm5124 compress-raw-zlib-pm5124 constant-pm cpan-meta-pm5124 cpan-meta-requirements-pm5124 cpan-meta-yaml-pm cpan-pm5124 crypt-rc4-pm cyrus-sasl2-shlibs data-optlist-pm5124 data-stag-pm5124 data-uuid-pm5124 db53-aes-shlibs devel-globaldestruction-pm5124 devel-globaldestruction-xs-pm5124 digest-hmac-pm digest-perl-md5-pm digest-sha1-pm5124 dime-tools-pm5124 dist-checkconflicts-pm5124 email-date-format-pm encode-locale-pm5124 encode-pm5124 eval-closure-pm5124 expat1-shlibs exporter-pm extutils-cbuilder-pm extutils-install-pm extutils-manifest-pm extutils-parsexs-pm fcgi-pm5124 file-homedir-pm5124 file-listing-pm5124 file-which-pm5124 fontconfig-config fontconfig2-shlibs freetype219-shlibs freezethaw-pm gd-pm5124 gd-svg-pm5124 gd3-shlibs gnupg-unified graph-pm heap-pm html-entities-numbered-pm html-parser-pm5124 html-tagset-pm html-tidy-pm5124 html-tree-pm5124 http-cookies-pm5124 http-daemon-pm5124 http-date-pm5124 http-message-pm5124 http-negotiate-pm5124 io-compress-pm5124 io-html-pm5124 io-socket-ssl-pm5124 io-string-pm io-stringy-pm json-pm5124 json-pp-pm json-xs-pm5124 libcurl4-shlibs libjbig-shlibs libjpeg9-shlibs liblzma5-shlibs libpng16-shlibs librtmp-shlibs libssh2.1-shlibs libtidyp-shlibs libtiff5-shlibs libusb-shlibs libwww-pm5124 libxml-pm5124 libxml2-shlibs libxslt-shlibs list-moreutils-pm5124 lwp-mediatypes-pm5124 mac-systemdirectory-pm5124 mailtools-pm5124 mime-lite-pm5124 mime-tools-pm5124 mime-types-pm mldbm-pm module-build-pm5124 module-implementation-pm5124 module-metadata-pm5124 module-runtime-pm5124 module-signature-pm5124 moose-pm5124 mozilla-ca-pm mro-compat-pm5124 net-http-pm5124 net-idn-encode-pm5124 net-ssleay-pm5124 ole-storagelite-pm openldap24-shlibs openssl100-shlibs package-deprecationmanager-pm5124 package-generator-pm package-stash-pm5124 package-stash-xs-pm5124 par-dist-pm params-classify-pm5124 params-util-pm5124 parse-cpan-meta-pm perl-ostype-pm5124 perl5124-core pod-readme-pm podlators-pm readline6-shlibs rec-descent-pm regexp-common-pm scalar-list-utils-pm5124 set-scalar-pm soap-lite-pm5124 software-license-pm5124 spreadsheet-parseexcel-pm5124 spreadsheet-writeexcel-pm sub-exporter-pm5124 sub-exporter-progressive-pm5124 sub-install-pm5124 sub-name-pm5124 svg-pm task-weaken-pm5124 test-harness-pm5124 text-balanced-pm text-glob-pm text-iconv-pm5124 text-shellwords-pm tie-ixhash-pm time-date-pm tk-pm5124 try-tiny-pm types-serialiser-pm unicode-map-pm5124 unicode-normalize-pm5124 unicode-string-pm5124 uri-pm5124 version-pm5124 www-robotrules-pm5124 xft2-shlibs xml-dom-pm5124 xml-filter-buffertext-pm5124 xml-libxml-pm5124 xml-libxslt-pm5124 xml-namespacesupport-pm xml-node-pm5124 xml-parser-pm5124 xml-regexp-pm xml-sax-base-pm xml-sax-pm5124 xml-sax-writer-pm5124 xml-twig-pm5124 xml-writer-pm xml-xpathengine-pm Do you want to continue? [Y/n] (assuming default) curl --connect-timeout 30 -f -L -A 'fink/0.37.0' -O http://distfiles.master.finkmirrors.net/distfiles/BioPerl-1.6.901.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 11.7M 0 1203 0 0 820 0 4:09:41 0:00:01 4:09:40 821 1 11.7M 1 235k 0 0 136k 0 0:01:27 0:00:01 0:01:26 136k 4 11.7M 4 501k 0 0 182k 0 0:01:05 0:00:02 0:01:03 182k 5 11.7M 5 630k 0 0 168k 0 0:01:11 0:00:03 0:01:08 168k 6 11.7M 6 801k 0 0 169k 0 0:01:10 0:00:04 0:01:06 169k 8 11.7M 8 1047k 0 0 180k 0 0:01:06 0:00:05 0:01:01 240k 9 11.7M 9 1166k 0 0 173k 0 0:01:09 0:00:06 0:01:03 185k 12 11.7M 12 1449k 0 0 187k 0 0:01:04 0:00:07 0:00:57 189k 13 11.7M 13 1617k 0 0 185k 0 0:01:04 0:00:08 0:00:56 197k 15 11.7M 15 1835k 0 0 188k 0 0:01:03 0:00:09 0:00:54 207k 18 11.7M 18 2187k 0 0 189k 0 0:01:03 0:00:11 0:00:52 198k 18 11.7M 18 2187k 0 0 174k 0 0:01:08 0:00:12 0:00:56 175k 18 11.7M 18 2188k 0 0 166k 0 0:01:11 0:00:13 0:00:58 137k 20 11.7M 20 2409k 0 0 166k 0 0:01:12 0:00:14 0:00:58 137k 20 11.7M 20 2409k 0 0 155k 0 0:01:17 0:00:15 0:01:02 99k 20 11.7M 20 2409k 0 0 146k 0 0:01:22 0:00:16 0:01:06 46056 20 11.7M 20 2410k 0 0 143k 0 0:01:23 0:00:16 0:01:07 54150 20 11.7M 20 2422k 0 0 135k 0 0:01:28 0:00:17 0:01:11 49775 20 11.7M 20 2422k 0 0 128k 0 0:01:33 0:00:18 0:01:15 2947 20 11.7M 20 2422k 0 0 121k 0 0:01:38 0:00:19 0:01:19 2947 21 11.7M 21 2628k 0 0 123k 0 0:01:37 0:00:21 0:01:16 46914 22 11.7M 22 2653k 0 0 121k 0 0:01:38 0:00:21 0:01:17 49971 22 11.7M 22 2707k 0 0 119k 0 0:01:40 0:00:22 0:01:18 60772 23 11.7M 23 2785k 0 0 117k 0 0:01:42 0:00:23 0:01:19 76967 23 11.7M 23 2851k 0 0 115k 0 0:01:44 0:00:24 0:01:20 91212 24 11.7M 24 2991k 0 0 116k 0 0:01:43 0:00:25 0:01:18 82422 25 11.7M 25 3089k 0 0 114k 0 0:01:44 0:00:26 0:01:18 86987 26 11.7M 26 3144k 0 0 113k 0 0:01:45 0:00:27 0:01:18 89165 27 11.7M 27 3328k 0 0 115k 0 0:01:43 0:00:28 0:01:15 108k 30 11.7M 30 3666k 0 0 123k 0 0:01:37 0:00:29 0:01:08 161k 31 11.7M 31 3805k 0 0 123k 0 0:01:36 0:00:30 0:01:06 165k 43 11.7M 43 5258k 0 0 161k 0 0:01:14 0:00:32 0:00:42 376k 43 11.7M 43 5274k 0 0 160k 0 0:01:14 0:00:32 0:00:42 418k 53 11.7M 53 6474k 0 0 191k 0 0:01:02 0:00:33 0:00:29 631k 57 11.7M 57 6920k 0 0 199k 0 0:01:00 0:00:34 0:00:26 651k 66 11.7M 66 7955k 0 0 222k 0 0:00:53 0:00:35 0:00:18 830k 67 11.7M 67 8151k 0 0 221k 0 0:00:54 0:00:36 0:00:18 706k 74 11.7M 74 8912k 0 0 236k 0 0:00:50 0:00:37 0:00:13 743k 76 11.7M 76 9235k 0 0 238k 0 0:00:50 0:00:38 0:00:12 551k 84 11.7M 84 9.9M 0 0 256k 0 0:00:46 0:00:39 0:00:07 660k 89 11.7M 89 10.4M 0 0 262k 0 0:00:45 0:00:40 0:00:05 545k 93 11.7M 93 10.9M 0 0 267k 0 0:00:44 0:00:41 0:00:03 590k 97 11.7M 97 11.4M 0 0 274k 0 0:00:43 0:00:42 0:00:01 566k 100 11.7M 100 11.7M 0 0 280k 0 0:00:42 0:00:42 --:--:-- 673k Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/common-sense-pm_3.72-1_darwin-x86_64.deb Selecting previously deselected package common-sense-pm. (Reading database ... 4296 files and directories currently installed.) Unpacking common-sense-pm (from .../common-sense-pm_3.72-1_darwin-x86_64.deb) ... Setting up common-sense-pm (3.72-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/constant-pm_1.27-1_darwin-x86_64.deb Selecting previously deselected package constant-pm. (Reading database ... 4310 files and directories currently installed.) Unpacking constant-pm (from .../constant-pm_1.27-1_darwin-x86_64.deb) ... Setting up constant-pm (1.27-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/crypt-rc4-pm_2.02-1_darwin-x86_64.deb Selecting previously deselected package crypt-rc4-pm. (Reading database ... 4318 files and directories currently installed.) 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(Reading database ... 12415 files and directories currently installed.) Unpacking array-compare-pm5124 (from .../array-compare-pm5124_2.02-1_darwin-x86_64.deb) ... Setting up array-compare-pm5124 (2.02-1) ... Setting runtime build-lock... dpkg-deb -b /sw/build.build/root-fink-buildlock-bioperl-pm5124-1.6.901-2 /sw/build.build dpkg-deb: building package `fink-buildlock-bioperl-pm5124-1.6.901-2' in `/sw/build.build/fink-buildlock-bioperl-pm5124-1.6.901-2_2014.07.27-14.29.27_darwin-x86_64.deb'. Installing build-lock package... /sw/bin/dpkg-lockwait -i /sw/build.build/fink-buildlock-bioperl-pm5124-1.6.901-2_2014.07.27-14.29.27_darwin-x86_64.deb Selecting previously deselected package fink-buildlock-bioperl-pm5124-1.6.901-2. (Reading database ... 12425 files and directories currently installed.) Unpacking fink-buildlock-bioperl-pm5124-1.6.901-2 (from .../fink-buildlock-bioperl-pm5124-1.6.901-2_2014.07.27-14.29.27_darwin-x86_64.deb) ... Setting up fink-buildlock-bioperl-pm5124-1.6.901-2 (2014.07.27-14.29.27) ... sudo -u fink-bld [ENV] sh -c /tmp/fink.hfTfK env LANG=C LC_ALL=C /sw/bin/tar --no-same-owner --no-same-permissions -xvf /sw/src/BioPerl-1.6.901.tar.gz BioPerl-1.6.901 BioPerl-1.6.901/AUTHORS BioPerl-1.6.901/BioPerl.pm BioPerl-1.6.901/BUGS BioPerl-1.6.901/Build.PL BioPerl-1.6.901/Changes BioPerl-1.6.901/DEPENDENCIES BioPerl-1.6.901/DEPRECATED BioPerl-1.6.901/INSTALL BioPerl-1.6.901/INSTALL.SKIP BioPerl-1.6.901/INSTALL.WIN BioPerl-1.6.901/LICENSE BioPerl-1.6.901/MANIFEST BioPerl-1.6.901/META.json BioPerl-1.6.901/META.yml BioPerl-1.6.901/README BioPerl-1.6.901/Bio BioPerl-1.6.901/Bio/AlignIO.pm BioPerl-1.6.901/Bio/AnalysisI.pm BioPerl-1.6.901/Bio/AnalysisParserI.pm BioPerl-1.6.901/Bio/AnalysisResultI.pm BioPerl-1.6.901/Bio/AnnotatableI.pm BioPerl-1.6.901/Bio/AnnotationCollectionI.pm BioPerl-1.6.901/Bio/AnnotationI.pm BioPerl-1.6.901/Bio/Biblio.pm BioPerl-1.6.901/Bio/ClusterI.pm BioPerl-1.6.901/Bio/ClusterIO.pm BioPerl-1.6.901/Bio/DasI.pm BioPerl-1.6.901/Bio/DBLinkContainerI.pm BioPerl-1.6.901/Bio/DescribableI.pm BioPerl-1.6.901/Bio/FeatureHolderI.pm BioPerl-1.6.901/Bio/FeatureIO.pm BioPerl-1.6.901/Bio/HandlerBaseI.pm BioPerl-1.6.901/Bio/IdCollectionI.pm BioPerl-1.6.901/Bio/IdentifiableI.pm BioPerl-1.6.901/Bio/LocatableSeq.pm BioPerl-1.6.901/Bio/LocationI.pm BioPerl-1.6.901/Bio/MapIO.pm BioPerl-1.6.901/Bio/NexmlIO.pm BioPerl-1.6.901/Bio/OntologyIO.pm BioPerl-1.6.901/Bio/ParameterBaseI.pm BioPerl-1.6.901/Bio/Perl.pm BioPerl-1.6.901/Bio/PhyloNetwork.pm BioPerl-1.6.901/Bio/PrimarySeq.pm BioPerl-1.6.901/Bio/PrimarySeqI.pm BioPerl-1.6.901/Bio/PullParserI.pm BioPerl-1.6.901/Bio/Range.pm BioPerl-1.6.901/Bio/RangeI.pm BioPerl-1.6.901/Bio/SearchDist.pm BioPerl-1.6.901/Bio/SearchIO.pm BioPerl-1.6.901/Bio/Seq.pm BioPerl-1.6.901/Bio/SeqAnalysisParserI.pm BioPerl-1.6.901/Bio/SeqFeatureI.pm BioPerl-1.6.901/Bio/SeqI.pm BioPerl-1.6.901/Bio/SeqIO.pm BioPerl-1.6.901/Bio/SeqUtils.pm 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BioPerl-1.6.901/Bio/AlignIO/metafasta.pm BioPerl-1.6.901/Bio/AlignIO/msf.pm BioPerl-1.6.901/Bio/AlignIO/nexml.pm BioPerl-1.6.901/Bio/AlignIO/nexus.pm BioPerl-1.6.901/Bio/AlignIO/pfam.pm BioPerl-1.6.901/Bio/AlignIO/phylip.pm BioPerl-1.6.901/Bio/AlignIO/po.pm BioPerl-1.6.901/Bio/AlignIO/proda.pm BioPerl-1.6.901/Bio/AlignIO/prodom.pm BioPerl-1.6.901/Bio/AlignIO/psi.pm BioPerl-1.6.901/Bio/AlignIO/selex.pm BioPerl-1.6.901/Bio/AlignIO/stockholm.pm BioPerl-1.6.901/Bio/AlignIO/xmfa.pm BioPerl-1.6.901/Bio/AlignIO/Handler BioPerl-1.6.901/Bio/AlignIO/Handler/GenericAlignHandler.pm BioPerl-1.6.901/Bio/Annotation BioPerl-1.6.901/Bio/Annotation/AnnotationFactory.pm BioPerl-1.6.901/Bio/Annotation/Collection.pm BioPerl-1.6.901/Bio/Annotation/Comment.pm BioPerl-1.6.901/Bio/Annotation/DBLink.pm BioPerl-1.6.901/Bio/Annotation/OntologyTerm.pm BioPerl-1.6.901/Bio/Annotation/Reference.pm BioPerl-1.6.901/Bio/Annotation/Relation.pm BioPerl-1.6.901/Bio/Annotation/SimpleValue.pm 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BioPerl-1.6.901/t/lib/Test/Simple.pm BioPerl-1.6.901/t/lib/Test/Tutorial.pod BioPerl-1.6.901/t/lib/Test/Warn.pm BioPerl-1.6.901/t/lib/Test/Builder BioPerl-1.6.901/t/lib/Test/Builder/Module.pm BioPerl-1.6.901/t/lib/Test/Builder/Tester.pm BioPerl-1.6.901/t/lib/Test/Builder/Tester BioPerl-1.6.901/t/lib/Test/Builder/Tester/Color.pm BioPerl-1.6.901/t/lib/Test/Harness BioPerl-1.6.901/t/lib/Test/Harness/Assert.pm BioPerl-1.6.901/t/lib/Test/Harness/Iterator.pm BioPerl-1.6.901/t/lib/Test/Harness/Point.pm BioPerl-1.6.901/t/lib/Test/Harness/Results.pm BioPerl-1.6.901/t/lib/Test/Harness/Straps.pm BioPerl-1.6.901/t/lib/Test/Harness/TAP.pod BioPerl-1.6.901/t/lib/Test/Harness/Util.pm BioPerl-1.6.901/t/lib/Tree BioPerl-1.6.901/t/lib/Tree/DAG_Node.pm BioPerl-1.6.901/t/LiveSeq BioPerl-1.6.901/t/LiveSeq/Chain.t BioPerl-1.6.901/t/LiveSeq/LiveSeq.t BioPerl-1.6.901/t/LiveSeq/Mutation.t BioPerl-1.6.901/t/LiveSeq/Mutator.t BioPerl-1.6.901/t/LocalDB BioPerl-1.6.901/t/LocalDB/BioDBGFF.t BioPerl-1.6.901/t/LocalDB/DBFasta.t BioPerl-1.6.901/t/LocalDB/DBQual.t BioPerl-1.6.901/t/LocalDB/Flat.t BioPerl-1.6.901/t/LocalDB/Registry.t BioPerl-1.6.901/t/LocalDB/SeqFeature.t BioPerl-1.6.901/t/LocalDB/transfac_pro.t BioPerl-1.6.901/t/LocalDB/Index BioPerl-1.6.901/t/LocalDB/Index/Blast.t BioPerl-1.6.901/t/LocalDB/Index/BlastTable.t BioPerl-1.6.901/t/LocalDB/Index/Index.t BioPerl-1.6.901/t/Map BioPerl-1.6.901/t/Map/Cyto.t BioPerl-1.6.901/t/Map/Linkage.t BioPerl-1.6.901/t/Map/Map.t BioPerl-1.6.901/t/Map/MapIO.t BioPerl-1.6.901/t/Map/MicrosatelliteMarker.t BioPerl-1.6.901/t/Map/Physical.t BioPerl-1.6.901/t/Matrix BioPerl-1.6.901/t/Matrix/InstanceSite.t BioPerl-1.6.901/t/Matrix/Matrix.t BioPerl-1.6.901/t/Matrix/ProtMatrix.t BioPerl-1.6.901/t/Matrix/ProtPsm.t BioPerl-1.6.901/t/Matrix/SiteMatrix.t BioPerl-1.6.901/t/Matrix/IO BioPerl-1.6.901/t/Matrix/IO/masta.t BioPerl-1.6.901/t/Matrix/IO/psm.t BioPerl-1.6.901/t/Ontology BioPerl-1.6.901/t/Ontology/GOterm.t BioPerl-1.6.901/t/Ontology/GraphAdaptor.t BioPerl-1.6.901/t/Ontology/Ontology.t BioPerl-1.6.901/t/Ontology/OntologyEngine.t BioPerl-1.6.901/t/Ontology/OntologyStore.t BioPerl-1.6.901/t/Ontology/Relationship.t BioPerl-1.6.901/t/Ontology/RelationshipType.t BioPerl-1.6.901/t/Ontology/Term.t BioPerl-1.6.901/t/Ontology/IO BioPerl-1.6.901/t/Ontology/IO/go.t BioPerl-1.6.901/t/Ontology/IO/interpro.t BioPerl-1.6.901/t/Ontology/IO/obo.t BioPerl-1.6.901/t/Phenotype BioPerl-1.6.901/t/Phenotype/Correlate.t BioPerl-1.6.901/t/Phenotype/Measure.t BioPerl-1.6.901/t/Phenotype/MeSH.t BioPerl-1.6.901/t/Phenotype/MiniMIMentry.t BioPerl-1.6.901/t/Phenotype/OMIMentry.t BioPerl-1.6.901/t/Phenotype/OMIMentryAllelicVariant.t BioPerl-1.6.901/t/Phenotype/OMIMparser.t BioPerl-1.6.901/t/Phenotype/Phenotype.t BioPerl-1.6.901/t/PopGen BioPerl-1.6.901/t/PopGen/Coalescent.t BioPerl-1.6.901/t/PopGen/HtSNP.t BioPerl-1.6.901/t/PopGen/MK.t BioPerl-1.6.901/t/PopGen/PopGen.t BioPerl-1.6.901/t/PopGen/PopGenSims.t BioPerl-1.6.901/t/PopGen/TagHaplotype.t BioPerl-1.6.901/t/RemoteDB BioPerl-1.6.901/t/RemoteDB/BioFetch.t BioPerl-1.6.901/t/RemoteDB/CUTG.t BioPerl-1.6.901/t/RemoteDB/EMBL.t BioPerl-1.6.901/t/RemoteDB/EntrezGene.t BioPerl-1.6.901/t/RemoteDB/EUtilities.t BioPerl-1.6.901/t/RemoteDB/GenBank.t BioPerl-1.6.901/t/RemoteDB/GenPept.t BioPerl-1.6.901/t/RemoteDB/MeSH.t BioPerl-1.6.901/t/RemoteDB/RefSeq.t BioPerl-1.6.901/t/RemoteDB/SeqHound.t BioPerl-1.6.901/t/RemoteDB/SeqRead_fail.t BioPerl-1.6.901/t/RemoteDB/SeqVersion.t BioPerl-1.6.901/t/RemoteDB/SwissProt.t BioPerl-1.6.901/t/RemoteDB/Taxonomy.t BioPerl-1.6.901/t/RemoteDB/HIV BioPerl-1.6.901/t/RemoteDB/HIV/HIV.t BioPerl-1.6.901/t/RemoteDB/HIV/HIVAnnotProcessor.t BioPerl-1.6.901/t/RemoteDB/HIV/HIVQuery.t BioPerl-1.6.901/t/RemoteDB/HIV/HIVQueryHelper.t BioPerl-1.6.901/t/RemoteDB/Query BioPerl-1.6.901/t/RemoteDB/Query/GenBank.t BioPerl-1.6.901/t/Restriction BioPerl-1.6.901/t/Restriction/Analysis-refac.t BioPerl-1.6.901/t/Restriction/Analysis.t BioPerl-1.6.901/t/Restriction/Gel.t BioPerl-1.6.901/t/Restriction/IO.t BioPerl-1.6.901/t/Root BioPerl-1.6.901/t/Root/Exception.t BioPerl-1.6.901/t/Root/HTTPget.t BioPerl-1.6.901/t/Root/RootI.t BioPerl-1.6.901/t/Root/RootIO.t BioPerl-1.6.901/t/Root/Storable.t BioPerl-1.6.901/t/Root/Tempfile.t BioPerl-1.6.901/t/Root/Utilities.t BioPerl-1.6.901/t/SearchIO BioPerl-1.6.901/t/SearchIO/axt.t BioPerl-1.6.901/t/SearchIO/blast.t BioPerl-1.6.901/t/SearchIO/blast_pull.t BioPerl-1.6.901/t/SearchIO/blasttable.t BioPerl-1.6.901/t/SearchIO/blastxml.t BioPerl-1.6.901/t/SearchIO/CigarString.t BioPerl-1.6.901/t/SearchIO/cross_match.t BioPerl-1.6.901/t/SearchIO/erpin.t BioPerl-1.6.901/t/SearchIO/exonerate.t BioPerl-1.6.901/t/SearchIO/fasta.t BioPerl-1.6.901/t/SearchIO/gmap_f9.t BioPerl-1.6.901/t/SearchIO/hmmer.t BioPerl-1.6.901/t/SearchIO/hmmer_pull.t BioPerl-1.6.901/t/SearchIO/infernal.t BioPerl-1.6.901/t/SearchIO/megablast.t BioPerl-1.6.901/t/SearchIO/psl.t BioPerl-1.6.901/t/SearchIO/rnamotif.t BioPerl-1.6.901/t/SearchIO/SearchIO.t BioPerl-1.6.901/t/SearchIO/sim4.t BioPerl-1.6.901/t/SearchIO/SimilarityPair.t BioPerl-1.6.901/t/SearchIO/Tiling.t BioPerl-1.6.901/t/SearchIO/waba.t BioPerl-1.6.901/t/SearchIO/wise.t BioPerl-1.6.901/t/SearchIO/Writer BioPerl-1.6.901/t/SearchIO/Writer/GbrowseGFF.t BioPerl-1.6.901/t/SearchIO/Writer/HitTableWriter.t BioPerl-1.6.901/t/SearchIO/Writer/HSPTableWriter.t BioPerl-1.6.901/t/SearchIO/Writer/HTMLWriter.t BioPerl-1.6.901/t/SearchIO/Writer/TextWriter.t BioPerl-1.6.901/t/Seq BioPerl-1.6.901/t/Seq/DBLink.t BioPerl-1.6.901/t/Seq/EncodedSeq.t BioPerl-1.6.901/t/Seq/LargeLocatableSeq.t BioPerl-1.6.901/t/Seq/LargePSeq.t BioPerl-1.6.901/t/Seq/LocatableSeq.t BioPerl-1.6.901/t/Seq/MetaSeq.t BioPerl-1.6.901/t/Seq/PrimaryQual.t BioPerl-1.6.901/t/Seq/PrimarySeq.t BioPerl-1.6.901/t/Seq/PrimedSeq.t BioPerl-1.6.901/t/Seq/Quality.t BioPerl-1.6.901/t/Seq/Seq.t BioPerl-1.6.901/t/Seq/WithQuality.t BioPerl-1.6.901/t/SeqFeature BioPerl-1.6.901/t/SeqFeature/Clone.t BioPerl-1.6.901/t/SeqFeature/FeatureIO.t BioPerl-1.6.901/t/SeqFeature/Location.t BioPerl-1.6.901/t/SeqFeature/LocationFactory.t BioPerl-1.6.901/t/SeqFeature/Primer.t BioPerl-1.6.901/t/SeqFeature/Range.t BioPerl-1.6.901/t/SeqFeature/RangeI.t BioPerl-1.6.901/t/SeqFeature/SeqAnalysisParser.t BioPerl-1.6.901/t/SeqFeature/SeqFeatAnnotated.t BioPerl-1.6.901/t/SeqFeature/SeqFeatCollection.t BioPerl-1.6.901/t/SeqFeature/SeqFeature.t BioPerl-1.6.901/t/SeqFeature/SeqFeaturePrimer.t BioPerl-1.6.901/t/SeqFeature/Unflattener.t BioPerl-1.6.901/t/SeqFeature/Unflattener2.t BioPerl-1.6.901/t/SeqIO BioPerl-1.6.901/t/SeqIO/abi.t BioPerl-1.6.901/t/SeqIO/ace.t BioPerl-1.6.901/t/SeqIO/agave.t BioPerl-1.6.901/t/SeqIO/alf.t BioPerl-1.6.901/t/SeqIO/asciitree.t BioPerl-1.6.901/t/SeqIO/bsml.t BioPerl-1.6.901/t/SeqIO/bsml_sax.t BioPerl-1.6.901/t/SeqIO/chadoxml.t BioPerl-1.6.901/t/SeqIO/chaos.t BioPerl-1.6.901/t/SeqIO/chaosxml.t BioPerl-1.6.901/t/SeqIO/ctf.t BioPerl-1.6.901/t/SeqIO/embl.t BioPerl-1.6.901/t/SeqIO/entrezgene.t BioPerl-1.6.901/t/SeqIO/excel.t BioPerl-1.6.901/t/SeqIO/exp.t BioPerl-1.6.901/t/SeqIO/fasta.t BioPerl-1.6.901/t/SeqIO/fastq.t BioPerl-1.6.901/t/SeqIO/flybase_chadoxml.t BioPerl-1.6.901/t/SeqIO/game.t BioPerl-1.6.901/t/SeqIO/gbxml.t BioPerl-1.6.901/t/SeqIO/gcg.t BioPerl-1.6.901/t/SeqIO/genbank.t BioPerl-1.6.901/t/SeqIO/Handler.t BioPerl-1.6.901/t/SeqIO/interpro.t BioPerl-1.6.901/t/SeqIO/kegg.t BioPerl-1.6.901/t/SeqIO/largefasta.t BioPerl-1.6.901/t/SeqIO/lasergene.t BioPerl-1.6.901/t/SeqIO/locuslink.t BioPerl-1.6.901/t/SeqIO/mbsout.t BioPerl-1.6.901/t/SeqIO/metafasta.t BioPerl-1.6.901/t/SeqIO/msout.t BioPerl-1.6.901/t/SeqIO/MultiFile.t BioPerl-1.6.901/t/SeqIO/Multiple_fasta.t BioPerl-1.6.901/t/SeqIO/nexml.t BioPerl-1.6.901/t/SeqIO/phd.t BioPerl-1.6.901/t/SeqIO/pir.t BioPerl-1.6.901/t/SeqIO/pln.t BioPerl-1.6.901/t/SeqIO/qual.t BioPerl-1.6.901/t/SeqIO/raw.t BioPerl-1.6.901/t/SeqIO/scf.t BioPerl-1.6.901/t/SeqIO/SeqBuilder.t BioPerl-1.6.901/t/SeqIO/SeqIO.t BioPerl-1.6.901/t/SeqIO/seqxml.t BioPerl-1.6.901/t/SeqIO/Splicedseq.t BioPerl-1.6.901/t/SeqIO/strider.t BioPerl-1.6.901/t/SeqIO/swiss.t BioPerl-1.6.901/t/SeqIO/tab.t BioPerl-1.6.901/t/SeqIO/table.t BioPerl-1.6.901/t/SeqIO/tigr.t BioPerl-1.6.901/t/SeqIO/tigrxml.t BioPerl-1.6.901/t/SeqIO/tinyseq.t BioPerl-1.6.901/t/SeqIO/ztr.t BioPerl-1.6.901/t/SeqTools BioPerl-1.6.901/t/SeqTools/Backtranslate.t BioPerl-1.6.901/t/SeqTools/CodonTable.t BioPerl-1.6.901/t/SeqTools/ECnumber.t BioPerl-1.6.901/t/SeqTools/GuessSeqFormat.t BioPerl-1.6.901/t/SeqTools/OddCodes.t BioPerl-1.6.901/t/SeqTools/SeqPattern.t BioPerl-1.6.901/t/SeqTools/SeqStats.t BioPerl-1.6.901/t/SeqTools/SeqUtils.t BioPerl-1.6.901/t/SeqTools/SeqWords.t BioPerl-1.6.901/t/Structure BioPerl-1.6.901/t/Structure/IO.t BioPerl-1.6.901/t/Structure/Structure.t BioPerl-1.6.901/t/Tools BioPerl-1.6.901/t/Tools/ePCR.t BioPerl-1.6.901/t/Tools/Est2Genome.t BioPerl-1.6.901/t/Tools/FootPrinter.t BioPerl-1.6.901/t/Tools/Geneid.t BioPerl-1.6.901/t/Tools/Genewise.t BioPerl-1.6.901/t/Tools/Genomewise.t BioPerl-1.6.901/t/Tools/Genpred.t BioPerl-1.6.901/t/Tools/GFF.t BioPerl-1.6.901/t/Tools/GuessSeqFormat.t BioPerl-1.6.901/t/Tools/Hmmer.t BioPerl-1.6.901/t/Tools/IUPAC.t BioPerl-1.6.901/t/Tools/Lucy.t BioPerl-1.6.901/t/Tools/Match.t BioPerl-1.6.901/t/Tools/pICalculator.t BioPerl-1.6.901/t/Tools/Primer3.t BioPerl-1.6.901/t/Tools/Promoterwise.t BioPerl-1.6.901/t/Tools/Pseudowise.t BioPerl-1.6.901/t/Tools/QRNA.t BioPerl-1.6.901/t/Tools/RandDistFunctions.t BioPerl-1.6.901/t/Tools/RepeatMasker.t BioPerl-1.6.901/t/Tools/rnamotif.t BioPerl-1.6.901/t/Tools/Seg.t BioPerl-1.6.901/t/Tools/Sigcleave.t BioPerl-1.6.901/t/Tools/Signalp.t BioPerl-1.6.901/t/Tools/Sim4.t BioPerl-1.6.901/t/Tools/SiRNA.t BioPerl-1.6.901/t/Tools/TandemRepeatsFinder.t BioPerl-1.6.901/t/Tools/TargetP.t BioPerl-1.6.901/t/Tools/Tmhmm.t BioPerl-1.6.901/t/Tools/tRNAscanSE.t BioPerl-1.6.901/t/Tools/Alignment BioPerl-1.6.901/t/Tools/Alignment/Consed.t BioPerl-1.6.901/t/Tools/Analysis BioPerl-1.6.901/t/Tools/Analysis/DNA BioPerl-1.6.901/t/Tools/Analysis/DNA/ESEfinder.t BioPerl-1.6.901/t/Tools/Analysis/Protein BioPerl-1.6.901/t/Tools/Analysis/Protein/Domcut.t BioPerl-1.6.901/t/Tools/Analysis/Protein/ELM.t BioPerl-1.6.901/t/Tools/Analysis/Protein/GOR4.t BioPerl-1.6.901/t/Tools/Analysis/Protein/HNN.t BioPerl-1.6.901/t/Tools/Analysis/Protein/Mitoprot.t BioPerl-1.6.901/t/Tools/Analysis/Protein/NetPhos.t BioPerl-1.6.901/t/Tools/Analysis/Protein/Scansite.t BioPerl-1.6.901/t/Tools/Analysis/Protein/Sopma.t BioPerl-1.6.901/t/Tools/EMBOSS BioPerl-1.6.901/t/Tools/EMBOSS/Palindrome.t BioPerl-1.6.901/t/Tools/EUtilities BioPerl-1.6.901/t/Tools/EUtilities/egquery.t BioPerl-1.6.901/t/Tools/EUtilities/einfo.t BioPerl-1.6.901/t/Tools/EUtilities/elink_acheck.t BioPerl-1.6.901/t/Tools/EUtilities/elink_lcheck.t BioPerl-1.6.901/t/Tools/EUtilities/elink_llinks.t BioPerl-1.6.901/t/Tools/EUtilities/elink_ncheck.t BioPerl-1.6.901/t/Tools/EUtilities/elink_neighbor.t BioPerl-1.6.901/t/Tools/EUtilities/elink_neighbor_history.t BioPerl-1.6.901/t/Tools/EUtilities/elink_scores.t BioPerl-1.6.901/t/Tools/EUtilities/epost.t BioPerl-1.6.901/t/Tools/EUtilities/esearch.t BioPerl-1.6.901/t/Tools/EUtilities/espell.t BioPerl-1.6.901/t/Tools/EUtilities/esummary.t BioPerl-1.6.901/t/Tools/EUtilities/EUtilParameters.t BioPerl-1.6.901/t/Tools/Phylo BioPerl-1.6.901/t/Tools/Phylo/Gerp.t BioPerl-1.6.901/t/Tools/Phylo/Molphy.t BioPerl-1.6.901/t/Tools/Phylo/PAML.t BioPerl-1.6.901/t/Tools/Phylo/Phylip BioPerl-1.6.901/t/Tools/Phylo/Phylip/ProtDist.t BioPerl-1.6.901/t/Tools/Run BioPerl-1.6.901/t/Tools/Run/Dummy.pm BioPerl-1.6.901/t/Tools/Run/RemoteBlast.t BioPerl-1.6.901/t/Tools/Run/RemoteBlast_rpsblast.t BioPerl-1.6.901/t/Tools/Run/StandAloneBlast.t BioPerl-1.6.901/t/Tools/Run/WBCommandExts.t BioPerl-1.6.901/t/Tools/Run/WrapperBase.t BioPerl-1.6.901/t/Tools/Run/Dummy BioPerl-1.6.901/t/Tools/Run/Dummy/Config.pm BioPerl-1.6.901/t/Tools/Signalp BioPerl-1.6.901/t/Tools/Signalp/ExtendedSignalp.t BioPerl-1.6.901/t/Tools/Spidey BioPerl-1.6.901/t/Tools/Spidey/Spidey.t BioPerl-1.6.901/t/Tree BioPerl-1.6.901/t/Tree/Compatible.t BioPerl-1.6.901/t/Tree/Node.t BioPerl-1.6.901/t/Tree/RandomTreeFactory.t BioPerl-1.6.901/t/Tree/Tree.t BioPerl-1.6.901/t/Tree/TreeIO.t BioPerl-1.6.901/t/Tree/TreeStatistics.t BioPerl-1.6.901/t/Tree/PhyloNetwork BioPerl-1.6.901/t/Tree/PhyloNetwork/Factory.t BioPerl-1.6.901/t/Tree/PhyloNetwork/GraphViz.t BioPerl-1.6.901/t/Tree/PhyloNetwork/MuVector.t BioPerl-1.6.901/t/Tree/PhyloNetwork/PhyloNetwork.t BioPerl-1.6.901/t/Tree/PhyloNetwork/RandomFactory.t BioPerl-1.6.901/t/Tree/PhyloNetwork/TreeFactory.t BioPerl-1.6.901/t/Tree/TreeIO BioPerl-1.6.901/t/Tree/TreeIO/lintree.t BioPerl-1.6.901/t/Tree/TreeIO/newick.t BioPerl-1.6.901/t/Tree/TreeIO/nexml.t BioPerl-1.6.901/t/Tree/TreeIO/nexus.t BioPerl-1.6.901/t/Tree/TreeIO/nhx.t BioPerl-1.6.901/t/Tree/TreeIO/phyloxml.t BioPerl-1.6.901/t/Tree/TreeIO/svggraph.t BioPerl-1.6.901/t/Tree/TreeIO/tabtree.t BioPerl-1.6.901/t/Variation BioPerl-1.6.901/t/Variation/AAChange.t BioPerl-1.6.901/t/Variation/AAReverseMutate.t BioPerl-1.6.901/t/Variation/Allele.t BioPerl-1.6.901/t/Variation/DNAMutation.t BioPerl-1.6.901/t/Variation/RNAChange.t BioPerl-1.6.901/t/Variation/SeqDiff.t BioPerl-1.6.901/t/Variation/SNP.t BioPerl-1.6.901/t/Variation/Variation_IO.t sudo -u fink-bld [ENV] sh -c /tmp/fink.OhIEz [ -r /sw/fink/dists/stable/main/finkinfo/libs/perlmods/bioperl-pm.patch ] sudo -u fink-bld [ENV] sh -c /tmp/fink.OagiR patch -p1 < /sw/fink/dists/stable/main/finkinfo/libs/perlmods/bioperl-pm.patch patching file Build.PL rm -f t/PodSyntax.t sudo -u fink-bld [ENV] sh -c /tmp/fink.HFeZu ARCHFLAGS="" /usr/bin/arch -x86_64 perl5.12.4 Build.PL --install_base /sw --install_path bin=/sw/bin --install_path lib=/sw/lib/perl5/5.12.4 --install_path arch=/sw/lib/perl5/5.12.4/darwin-thread-multi-2level --install_path bindoc=/sw/share/man/man1 --install_path libdoc=/sw/share/man/man3 --install_path script=/sw/bin --destdir /sw/build.build/root-bioperl-pm5124-1.6.901-2 --accept WARNING: the following files are missing in your kit: t/PodSyntax.t Please inform the author. Checking prerequisites... recommends: * XML::Simple is not installed ERRORS/WARNINGS FOUND IN PREREQUISITES. You may wish to install the versions of the modules indicated above before proceeding with this installation Run 'Build installdeps' to install missing prerequisites. ############################# WARNING ############################# Bio::ASN1::EntrezGene not found. This is an *optional* module; however, because it has a circular dependency with BioPerl we do not include it on our list of recommended modules. If you require EntrezGene functionality, you can install Bio::ASN1::EntrezGene after BioPerl has finished installing. ############################# WARNING ############################# - will install all scripts Created MYMETA.yml and MYMETA.json Creating new 'Build' script for 'BioPerl' version '1.006901' ARCHFLAGS="" ./Build Building BioPerl /bin/rm -rf /sw/build.build/root-bioperl-pm5124-1.6.901-2 /bin/mkdir -p /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw /bin/mkdir -p /sw/build.build/root-bioperl-pm5124-1.6.901-2/DEBIAN /usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-bioperl-pm5124-1.6.901-2 sudo -u fink-bld [ENV] sh -c /tmp/fink.Xy72q ./Build install Building BioPerl Reading skip patterns from 'INSTALL.SKIP'. 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Installing /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/bin/bp_seqfeature_delete.pl Installing /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/bin/bp_seqfeature_gff3.pl Installing /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/bin/bp_seqfeature_load.pl Installing /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/bin/bp_seqret.pl Installing /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/bin/bp_seqretsplit.pl Installing /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/bin/bp_split_seq.pl Installing /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/bin/bp_sreformat.pl Installing /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/bin/bp_taxid4species.pl Installing /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/bin/bp_taxonomy2tree.pl Installing /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/bin/bp_translate_seq.pl Installing /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/bin/bp_tree2pag.pl Installing /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/bin/bp_unflatten_seq.pl Writing /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/lib/perl5/5.12.4/darwin-thread-multi-2level/auto/Bio/.packlist mv /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/share/man /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/lib/perl5/5.12.4 mkdir -p /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/share/bioperl-pm5124/t cp -r models examples scripts doc /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/share/bioperl-pm5124 cp -r t/data /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/share/bioperl-pm5124/t mv /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/bin/*.pl /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/share/bioperl-pm5124/scripts/ sudo -u fink-bld [ENV] sh -c /tmp/fink.6tmnL /usr/bin/install -d -m 700 /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/share/doc/bioperl-pm5124 /bin/cp -r AUTHORS /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/share/doc/bioperl-pm5124/ /bin/cp -r Changes /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/share/doc/bioperl-pm5124/ /bin/cp -r DEPENDENCIES /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/share/doc/bioperl-pm5124/ /bin/cp -r INSTALL /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/share/doc/bioperl-pm5124/ /bin/cp -r LICENSE /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/share/doc/bioperl-pm5124/ /bin/cp -r README /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/share/doc/bioperl-pm5124/ /bin/chmod -R go=u-w /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/share/doc/bioperl-pm5124 /bin/rm -f /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/info/dir /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/info/dir.old /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/share/info/dir /sw/build.build/root-bioperl-pm5124-1.6.901-2/sw/share/info/dir.old Reverting ownership of install dir to root Writing control file... Writing md5sums file... env LANG=C LC_ALL=C dpkg-deb -b root-bioperl-pm5124-1.6.901-2 /sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/perlmods dpkg-deb: building package `bioperl-pm5124' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/perlmods/bioperl-pm5124_1.6.901-2_darwin-x86_64.deb'. Removing runtime build-lock... Removing build-lock package... /sw/bin/dpkg-lockwait -r fink-buildlock-bioperl-pm5124-1.6.901-2 (Reading database ... 12426 files and directories currently installed.) Removing fink-buildlock-bioperl-pm5124-1.6.901-2 ...