printf '

' | fink --no-use-binary-dist --yes  --build-as-nobody rebuild cran-candisc-r215 2>&1
The package 'cran-candisc-r215' will be built without being installed.
Reading build dependency for cran-candisc-r215-0.6-5-1...
Reading dependency for cran-candisc-r215-0.6-5-1...
Reading build conflict for cran-candisc-r215-0.6-5-1...
The package 'r-base215-dev' will be installed.
Reading dependency for r-base215-dev-2.15.3-112...
Reading runtime dependency for r-base215-dev-2.15.3-112...
The package 'r-base215' will be installed.
Reading dependency for r-base215-2.15.3-112...
Reading runtime dependency for r-base215-2.15.3-112...
The package 'cran-car-r215' will be installed.
Reading dependency for cran-car-r215-2.0-20-1...
Reading runtime dependency for cran-car-r215-2.0-20-1...
The package 'cran-heplots-r215' will be installed.
Reading dependency for cran-heplots-r215-1.0-11-1...
Reading runtime dependency for cran-heplots-r215-1.0-11-1...
The package 'r-base215-shlibs' will be installed.
Reading dependency for r-base215-shlibs-2.15.3-112...
Reading runtime dependency for r-base215-shlibs-2.15.3-112...
The package 'flag-sort' will be installed.
Reading dependency for flag-sort-0.5-1...
Reading runtime dependency for flag-sort-0.5-1...
The package 'cran-mass-r215' will be installed.
Reading dependency for cran-mass-r215-7.3-23-2...
Reading runtime dependency for cran-mass-r215-7.3-23-2...
The package 'cran-nnet-r215' will be installed.
Reading dependency for cran-nnet-r215-7.3-8-2...
Reading runtime dependency for cran-nnet-r215-7.3-8-2...
The package 'cairo-shlibs' will be installed.
Reading dependency for cairo-shlibs-1.12.14-1...
Reading runtime dependency for cairo-shlibs-1.12.14-1...
The package 'glib2-shlibs' will be installed.
Reading dependency for glib2-shlibs-2.22.4-8...
Reading runtime dependency for glib2-shlibs-2.22.4-8...
The package 'libicu48-shlibs' will be installed.
Reading dependency for libicu48-shlibs-4.8.1.1-2...
Reading runtime dependency for libicu48-shlibs-4.8.1.1-2...
The package 'pango1-xft2-ft219-shlibs' will be installed.
Reading dependency for pango1-xft2-ft219-shlibs-1.24.5-9...
Reading runtime dependency for pango1-xft2-ft219-shlibs-1.24.5-9...
The package 'libpcre1-shlibs' will be installed.
Reading dependency for libpcre1-shlibs-8.35-1...
Reading runtime dependency for libpcre1-shlibs-8.35-1...
The package 'tcltk' will be installed.
Reading dependency for tcltk-8.6.1-104...
Reading runtime dependency for tcltk-8.6.1-104...
The package 'pixman-shlibs' will be installed.
Reading dependency for pixman-shlibs-0.32.4-1...
Reading runtime dependency for pixman-shlibs-0.32.4-1...
The package 'xdg-base' will be installed.
Reading dependency for xdg-base-0.8-2...
Reading runtime dependency for xdg-base-0.8-2...
The package 'libthai-shlibs' will be installed.
Reading dependency for libthai-shlibs-0.1.20-1...
Reading runtime dependency for libthai-shlibs-0.1.20-1...
The package 'tcltk-shlibs' will be installed.
Reading dependency for tcltk-shlibs-8.6.1-104...
Reading runtime dependency for tcltk-shlibs-8.6.1-104...
The package 'libdatrie1-shlibs' will be installed.
Reading dependency for libdatrie1-shlibs-0.2.8-2...
Reading runtime dependency for libdatrie1-shlibs-0.2.8-2...
The package 'libthai' will be installed.
Reading dependency for libthai-0.1.20-1...
Reading runtime dependency for libthai-0.1.20-1...
The following package will be rebuilt:
 cran-candisc-r215
The following 20 additional packages will be installed:
 cairo-shlibs cran-car-r215 cran-heplots-r215 cran-mass-r215 cran-nnet-r215
 flag-sort glib2-shlibs libdatrie1-shlibs libicu48-shlibs libpcre1-shlibs
 libthai libthai-shlibs pango1-xft2-ft219-shlibs pixman-shlibs r-base215
 r-base215-dev r-base215-shlibs tcltk tcltk-shlibs xdg-base
Do you want to continue? [Y/n] (assuming default)
Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/debs/flag-sort_0.5-1_darwin-x86_64.deb
Selecting previously deselected package flag-sort.
(Reading database ... 100383 files and directories currently installed.)
Unpacking flag-sort (from .../flag-sort_0.5-1_darwin-x86_64.deb) ...
Setting up flag-sort (0.5-1) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libdatrie1-shlibs_0.2.8-2_darwin-x86_64.deb
Selecting previously deselected package libdatrie1-shlibs.
(Reading database ... 100384 files and directories currently installed.)
Unpacking libdatrie1-shlibs (from .../libdatrie1-shlibs_0.2.8-2_darwin-x86_64.deb) ...
Setting up libdatrie1-shlibs (0.2.8-2) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libicu48-shlibs_4.8.1.1-2_darwin-x86_64.deb
Selecting previously deselected package libicu48-shlibs.
(Reading database ... 100391 files and directories currently installed.)
Unpacking libicu48-shlibs (from .../libicu48-shlibs_4.8.1.1-2_darwin-x86_64.deb) ...
Setting up libicu48-shlibs (4.8.1.1-2) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libpcre1-shlibs_8.35-1_darwin-x86_64.deb
Selecting previously deselected package libpcre1-shlibs.
(Reading database ... 100405 files and directories currently installed.)
Unpacking libpcre1-shlibs (from .../libpcre1-shlibs_8.35-1_darwin-x86_64.deb) ...
Setting up libpcre1-shlibs (8.35-1) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libthai-shlibs_0.1.20-1_darwin-x86_64.deb /sw/fink/debs/libthai_0.1.20-1_darwin-x86_64.deb
Selecting previously deselected package libthai-shlibs.
(Reading database ... 100418 files and directories currently installed.)
Unpacking libthai-shlibs (from .../libthai-shlibs_0.1.20-1_darwin-x86_64.deb) ...
Selecting previously deselected package libthai.
Unpacking libthai (from .../libthai_0.1.20-1_darwin-x86_64.deb) ...
Setting up libthai (0.1.20-1) ...

Setting up libthai-shlibs (0.1.20-1) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/pixman-shlibs_0.32.4-1_darwin-x86_64.deb
Selecting previously deselected package pixman-shlibs.
(Reading database ... 100433 files and directories currently installed.)
Unpacking pixman-shlibs (from .../pixman-shlibs_0.32.4-1_darwin-x86_64.deb) ...
Setting up pixman-shlibs (0.32.4-1) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/debs/tcltk_8.6.1-104_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/tcltk-shlibs_8.6.1-104_darwin-x86_64.deb
Selecting previously deselected package tcltk.
(Reading database ... 100437 files and directories currently installed.)
Unpacking tcltk (from .../tcltk_8.6.1-104_darwin-x86_64.deb) ...
Selecting previously deselected package tcltk-shlibs.
Unpacking tcltk-shlibs (from .../tcltk-shlibs_8.6.1-104_darwin-x86_64.deb) ...
Setting up tcltk-shlibs (8.6.1-104) ...

Setting up tcltk (8.6.1-104) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/debs/xdg-base_0.8-2_darwin-x86_64.deb
Selecting previously deselected package xdg-base.
(Reading database ... 100912 files and directories currently installed.)
Unpacking xdg-base (from .../xdg-base_0.8-2_darwin-x86_64.deb) ...
Setting up xdg-base (0.8-2) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/cairo-shlibs_1.12.14-1_darwin-x86_64.deb
Selecting previously deselected package cairo-shlibs.
(Reading database ... 100914 files and directories currently installed.)
Unpacking cairo-shlibs (from .../cairo-shlibs_1.12.14-1_darwin-x86_64.deb) ...
Setting up cairo-shlibs (1.12.14-1) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/debs/glib2-shlibs_2.22.4-8_darwin-x86_64.deb
Selecting previously deselected package glib2-shlibs.
(Reading database ... 100933 files and directories currently installed.)
Unpacking glib2-shlibs (from .../glib2-shlibs_2.22.4-8_darwin-x86_64.deb) ...
Setting up glib2-shlibs (2.22.4-8) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/gnome/pango1-xft2-ft219-shlibs_1.24.5-9_darwin-x86_64.deb
Selecting previously deselected package pango1-xft2-ft219-shlibs.
(Reading database ... 101160 files and directories currently installed.)
Unpacking pango1-xft2-ft219-shlibs (from .../pango1-xft2-ft219-shlibs_1.24.5-9_darwin-x86_64.deb) ...
Setting up pango1-xft2-ft219-shlibs (1.24.5-9) ...
Clearing dependency_libs of .la files being installed

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/debs/r-base215_2.15.3-112_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base215-shlibs_2.15.3-112_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base215-dev_2.15.3-112_darwin-x86_64.deb
Selecting previously deselected package r-base215.
(Reading database ... 101204 files and directories currently installed.)
Unpacking r-base215 (from .../r-base215_2.15.3-112_darwin-x86_64.deb) ...
Selecting previously deselected package r-base215-shlibs.
Unpacking r-base215-shlibs (from .../r-base215-shlibs_2.15.3-112_darwin-x86_64.deb) ...
Selecting previously deselected package r-base215-dev.
Unpacking r-base215-dev (from .../r-base215-dev_2.15.3-112_darwin-x86_64.deb) ...
Setting up r-base215-shlibs (2.15.3-112) ...

Setting up r-base215-dev (2.15.3-112) ...

Setting up r-base215 (2.15.3-112) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/debs/cran-mass-r215_7.3-23-2_darwin-x86_64.deb
Selecting previously deselected package cran-mass-r215.
(Reading database ... 103357 files and directories currently installed.)
Unpacking cran-mass-r215 (from .../cran-mass-r215_7.3-23-2_darwin-x86_64.deb) ...
Setting up cran-mass-r215 (7.3-23-2) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/debs/cran-nnet-r215_7.3-8-2_darwin-x86_64.deb
Selecting previously deselected package cran-nnet-r215.
(Reading database ... 103423 files and directories currently installed.)
Unpacking cran-nnet-r215 (from .../cran-nnet-r215_7.3-8-2_darwin-x86_64.deb) ...
Setting up cran-nnet-r215 (7.3-8-2) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/debs/cran-car-r215_2.0-20-1_darwin-x86_64.deb
Selecting previously deselected package cran-car-r215.
(Reading database ... 103466 files and directories currently installed.)
Unpacking cran-car-r215 (from .../cran-car-r215_2.0-20-1_darwin-x86_64.deb) ...
Setting up cran-car-r215 (2.0-20-1) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/debs/cran-heplots-r215_1.0-11-1_darwin-x86_64.deb
Selecting previously deselected package cran-heplots-r215.
(Reading database ... 103502 files and directories currently installed.)
Unpacking cran-heplots-r215 (from .../cran-heplots-r215_1.0-11-1_darwin-x86_64.deb) ...
Setting up cran-heplots-r215 (1.0-11-1) ...

Setting runtime build-lock...
dpkg-deb -b /sw/build.build/root-fink-buildlock-cran-candisc-r215-0.6-5-1 /sw/build.build
dpkg-deb: building package `fink-buildlock-cran-candisc-r215-0.6-5-1' in `/sw/build.build/fink-buildlock-cran-candisc-r215-0.6-5-1_2014.08.06-18.23.27_darwin-x86_64.deb'.
Installing build-lock package...
/sw/bin/dpkg-lockwait -i /sw/build.build/fink-buildlock-cran-candisc-r215-0.6-5-1_2014.08.06-18.23.27_darwin-x86_64.deb
Selecting previously deselected package fink-buildlock-cran-candisc-r215-0.6-5-1.
(Reading database ... 103547 files and directories currently installed.)
Unpacking fink-buildlock-cran-candisc-r215-0.6-5-1 (from .../fink-buildlock-cran-candisc-r215-0.6-5-1_2014.08.06-18.23.27_darwin-x86_64.deb) ...
Setting up fink-buildlock-cran-candisc-r215-0.6-5-1 (2014.08.06-18.23.27) ...

sudo -u fink-bld [ENV] sh -c /tmp/fink.KBr0F
env LANG=C LC_ALL=C /sw/bin/tar  --no-same-owner --no-same-permissions -xvf /sw/src/candisc_0.6-5.tar.gz
candisc/
candisc/MD5
candisc/man/
candisc/man/vectors.Rd
candisc/man/redundancy.Rd
candisc/man/plot.cancor.Rd
candisc/man/heplot.candiscList.Rd
candisc/man/heplot.candisc.Rd
candisc/man/heplot.cancor.Rd
candisc/man/dataIndex.Rd
candisc/man/candiscList.Rd
candisc/man/candisc.Rd
candisc/man/candisc-package.Rd
candisc/man/cancor.Rd
candisc/man/Wolves.Rd
candisc/man/Wilks.Rd
candisc/man/HSB.Rd
candisc/man/Grass.Rd
candisc/demo/
candisc/demo/painters.R
candisc/demo/00Index
candisc/data/
candisc/data/Wolves.rda
candisc/data/HSB.rda
candisc/data/Grass.rda
candisc/R/
candisc/R/vectors3d.R
candisc/R/vectors.R
candisc/R/redundancy.R
candisc/R/plot.candisc.R
candisc/R/plot.cancor.R
candisc/R/heplot3d.cancor.R
candisc/R/heplot.candisc.R
candisc/R/heplot.cancor.R
candisc/R/dataIndex.R
candisc/R/candiscList.R
candisc/R/candisc.R
candisc/R/cancor.R
candisc/R/Wilks.cancor.R
candisc/NEWS
candisc/NAMESPACE
candisc/DESCRIPTION
sudo -u fink-bld [ENV] sh -c /tmp/fink.YSRfP
/tmp/fink.C8HoO
#!/bin/bash -ev
  export TMPDIR=/sw/build.build/cran-candisc-r215-0.6-5-1/candisc/tmp
  BIN_R=/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R
  
  pushd ..
/sw/build.build/cran-candisc-r215-0.6-5-1 /sw/build.build/cran-candisc-r215-0.6-5-1/candisc
  if [[ 2.15 > 2.15 ]]; then
    $BIN_R --verbose CMD build --no-build-vignettes candisc
  else
    $BIN_R --verbose CMD build --no-vignettes candisc
  fi
* checking for file 'candisc/DESCRIPTION' ... OK
* preparing 'candisc':
* checking DESCRIPTION meta-information ... OK
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* looking to see if a 'data/datalist' file should be added
* building 'candisc_0.6-5.tar.gz'

/bin/rm -rf /sw/build.build/root-cran-candisc-r215-0.6-5-1
/bin/mkdir -p /sw/build.build/root-cran-candisc-r215-0.6-5-1/sw
/bin/mkdir -p /sw/build.build/root-cran-candisc-r215-0.6-5-1/DEBIAN
/usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-cran-candisc-r215-0.6-5-1
sudo -u fink-bld [ENV] sh -c /tmp/fink.0OTfN
/tmp/fink.SbiTu
#!/bin/sh -ev
  BIN_R=/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R
  
  mkdir -p /sw/build.build/root-cran-candisc-r215-0.6-5-1/sw/lib/R/2.15/site-library
  pushd /sw/build.build/cran-candisc-r215-0.6-5-1/candisc/.. && $BIN_R --verbose CMD install --library=/sw/build.build/root-cran-candisc-r215-0.6-5-1/sw/lib/R/2.15/site-library candisc
/sw/build.build/cran-candisc-r215-0.6-5-1 /sw/build.build/cran-candisc-r215-0.6-5-1/candisc
* installing *source* package 'candisc' ...
** package 'candisc' successfully unpacked and MD5 sums checked
** R
** data
**  moving datasets to lazyload DB
** demo
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded

* DONE (candisc)
sudo -u fink-bld [ENV] sh -c /tmp/fink.kSUmf
/bin/rm -f /sw/build.build/root-cran-candisc-r215-0.6-5-1/sw/info/dir /sw/build.build/root-cran-candisc-r215-0.6-5-1/sw/info/dir.old /sw/build.build/root-cran-candisc-r215-0.6-5-1/sw/share/info/dir /sw/build.build/root-cran-candisc-r215-0.6-5-1/sw/share/info/dir.old
Reverting ownership of install dir to root
Writing control file...
Writing md5sums file...
env LANG=C LC_ALL=C dpkg-deb -b root-cran-candisc-r215-0.6-5-1 /sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods
dpkg-deb: building package `cran-candisc-r215' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods/cran-candisc-r215_0.6-5-1_darwin-x86_64.deb'.
Removing runtime build-lock...
Removing build-lock package...
/sw/bin/dpkg-lockwait -r fink-buildlock-cran-candisc-r215-0.6-5-1
(Reading database ... 103548 files and directories currently installed.)
Removing fink-buildlock-cran-candisc-r215-0.6-5-1 ...