printf '

' | fink --no-use-binary-dist --yes  --build-as-nobody rebuild cran-care-r31 2>&1
The package 'cran-care-r31' will be built without being installed.
Reading build dependency for cran-care-r31-1.1.4-1...
Reading dependency for cran-care-r31-1.1.4-1...
Reading build conflict for cran-care-r31-1.1.4-1...
The package 'r-base31-dev' will be installed.
Reading dependency for r-base31-dev-3.1.1-2...
Reading runtime dependency for r-base31-dev-3.1.1-2...
The package 'r-base31' will be installed.
Reading dependency for r-base31-3.1.1-2...
Reading runtime dependency for r-base31-3.1.1-2...
The package 'cran-corpcor-r31' will be installed.
Reading dependency for cran-corpcor-r31-1.6.6-1...
Reading runtime dependency for cran-corpcor-r31-1.6.6-1...
The package 'r-base31-shlibs' will be installed.
Reading dependency for r-base31-shlibs-3.1.1-2...
Reading runtime dependency for r-base31-shlibs-3.1.1-2...
The package 'flag-sort' will be installed.
Reading dependency for flag-sort-0.5-1...
Reading runtime dependency for flag-sort-0.5-1...
The package 'cairo-shlibs' will be installed.
Reading dependency for cairo-shlibs-1.12.14-1...
Reading runtime dependency for cairo-shlibs-1.12.14-1...
The package 'gcc49-shlibs' will be installed.
Reading dependency for gcc49-shlibs-4.9.1-1000...
Reading runtime dependency for gcc49-shlibs-4.9.1-1000...
The package 'glib2-shlibs' will be installed.
Reading dependency for glib2-shlibs-2.22.4-8...
Reading runtime dependency for glib2-shlibs-2.22.4-8...
The package 'libicu48-shlibs' will be installed.
Reading dependency for libicu48-shlibs-4.8.1.1-2...
Reading runtime dependency for libicu48-shlibs-4.8.1.1-2...
The package 'liblzma5-shlibs' will be installed.
Reading dependency for liblzma5-shlibs-5.0.5-2...
Reading runtime dependency for liblzma5-shlibs-5.0.5-2...
The package 'libpng16-shlibs' will be installed.
Reading dependency for libpng16-shlibs-1.6.12-1...
Reading runtime dependency for libpng16-shlibs-1.6.12-1...
The package 'libtiff5-shlibs' will be installed.
Reading dependency for libtiff5-shlibs-4.0.3-5...
Reading runtime dependency for libtiff5-shlibs-4.0.3-5...
The package 'pango1-xft2-ft219-shlibs' will be installed.
Reading dependency for pango1-xft2-ft219-shlibs-1.24.5-9...
Reading runtime dependency for pango1-xft2-ft219-shlibs-1.24.5-9...
The package 'libpcre1-shlibs' will be installed.
Reading dependency for libpcre1-shlibs-8.35-1...
Reading runtime dependency for libpcre1-shlibs-8.35-1...
The package 'pixman-shlibs' will be installed.
Reading dependency for pixman-shlibs-0.32.4-1...
Reading runtime dependency for pixman-shlibs-0.32.4-1...
The package 'xdg-base' will be installed.
Reading dependency for xdg-base-0.8-2...
Reading runtime dependency for xdg-base-0.8-2...
The package 'libjbig-shlibs' will be installed.
Reading dependency for libjbig-shlibs-2.0-1...
Reading runtime dependency for libjbig-shlibs-2.0-1...
The package 'libthai-shlibs' will be installed.
Reading dependency for libthai-shlibs-0.1.20-1...
Reading runtime dependency for libthai-shlibs-0.1.20-1...
The package 'libdatrie1-shlibs' will be installed.
Reading dependency for libdatrie1-shlibs-0.2.8-2...
Reading runtime dependency for libdatrie1-shlibs-0.2.8-2...
The package 'libthai' will be installed.
Reading dependency for libthai-0.1.20-1...
Reading runtime dependency for libthai-0.1.20-1...
The following package will be rebuilt:
 cran-care-r31
The following 20 additional packages will be installed:
 cairo-shlibs cran-corpcor-r31 flag-sort gcc49-shlibs glib2-shlibs
 libdatrie1-shlibs libicu48-shlibs libjbig-shlibs liblzma5-shlibs
 libpcre1-shlibs libpng16-shlibs libthai libthai-shlibs libtiff5-shlibs
 pango1-xft2-ft219-shlibs pixman-shlibs r-base31 r-base31-dev r-base31-shlibs
 xdg-base
Do you want to continue? [Y/n] (assuming default)
Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/debs/flag-sort_0.5-1_darwin-x86_64.deb
Selecting previously deselected package flag-sort.
(Reading database ... 12855 files and directories currently installed.)
Unpacking flag-sort (from .../flag-sort_0.5-1_darwin-x86_64.deb) ...
Setting up flag-sort (0.5-1) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/gcc49-shlibs_4.9.1-1000_darwin-x86_64.deb
Selecting previously deselected package gcc49-shlibs.
(Reading database ... 12856 files and directories currently installed.)
Unpacking gcc49-shlibs (from .../gcc49-shlibs_4.9.1-1000_darwin-x86_64.deb) ...
Setting up gcc49-shlibs (4.9.1-1000) ...
Clearing dependency_libs of .la files being installed

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libdatrie1-shlibs_0.2.8-2_darwin-x86_64.deb
Selecting previously deselected package libdatrie1-shlibs.
(Reading database ... 12901 files and directories currently installed.)
Unpacking libdatrie1-shlibs (from .../libdatrie1-shlibs_0.2.8-2_darwin-x86_64.deb) ...
Setting up libdatrie1-shlibs (0.2.8-2) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libicu48-shlibs_4.8.1.1-2_darwin-x86_64.deb
Selecting previously deselected package libicu48-shlibs.
(Reading database ... 12908 files and directories currently installed.)
Unpacking libicu48-shlibs (from .../libicu48-shlibs_4.8.1.1-2_darwin-x86_64.deb) ...
Setting up libicu48-shlibs (4.8.1.1-2) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/libjbig-shlibs_2.0-1_darwin-x86_64.deb
Selecting previously deselected package libjbig-shlibs.
(Reading database ... 12922 files and directories currently installed.)
Unpacking libjbig-shlibs (from .../libjbig-shlibs_2.0-1_darwin-x86_64.deb) ...
Setting up libjbig-shlibs (2.0-1) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/utils/liblzma5-shlibs_5.0.5-2_darwin-x86_64.deb
Selecting previously deselected package liblzma5-shlibs.
(Reading database ... 12929 files and directories currently installed.)
Unpacking liblzma5-shlibs (from .../liblzma5-shlibs_5.0.5-2_darwin-x86_64.deb) ...
Setting up liblzma5-shlibs (5.0.5-2) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libpcre1-shlibs_8.35-1_darwin-x86_64.deb
Selecting previously deselected package libpcre1-shlibs.
(Reading database ... 12940 files and directories currently installed.)
Unpacking libpcre1-shlibs (from .../libpcre1-shlibs_8.35-1_darwin-x86_64.deb) ...
Setting up libpcre1-shlibs (8.35-1) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/libpng16-shlibs_1.6.12-1_darwin-x86_64.deb
Selecting previously deselected package libpng16-shlibs.
(Reading database ... 12953 files and directories currently installed.)
Unpacking libpng16-shlibs (from .../libpng16-shlibs_1.6.12-1_darwin-x86_64.deb) ...
Setting up libpng16-shlibs (1.6.12-1) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libthai-shlibs_0.1.20-1_darwin-x86_64.deb /sw/fink/debs/libthai_0.1.20-1_darwin-x86_64.deb
Selecting previously deselected package libthai-shlibs.
(Reading database ... 12961 files and directories currently installed.)
Unpacking libthai-shlibs (from .../libthai-shlibs_0.1.20-1_darwin-x86_64.deb) ...
Selecting previously deselected package libthai.
Unpacking libthai (from .../libthai_0.1.20-1_darwin-x86_64.deb) ...
Setting up libthai (0.1.20-1) ...

Setting up libthai-shlibs (0.1.20-1) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/debs/libtiff5-shlibs_4.0.3-5_darwin-x86_64.deb
Selecting previously deselected package libtiff5-shlibs.
(Reading database ... 12976 files and directories currently installed.)
Unpacking libtiff5-shlibs (from .../libtiff5-shlibs_4.0.3-5_darwin-x86_64.deb) ...
Setting up libtiff5-shlibs (4.0.3-5) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/pixman-shlibs_0.32.4-1_darwin-x86_64.deb
Selecting previously deselected package pixman-shlibs.
(Reading database ... 12981 files and directories currently installed.)
Unpacking pixman-shlibs (from .../pixman-shlibs_0.32.4-1_darwin-x86_64.deb) ...
Setting up pixman-shlibs (0.32.4-1) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/debs/xdg-base_0.8-2_darwin-x86_64.deb
Selecting previously deselected package xdg-base.
(Reading database ... 12985 files and directories currently installed.)
Unpacking xdg-base (from .../xdg-base_0.8-2_darwin-x86_64.deb) ...
Setting up xdg-base (0.8-2) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/cairo-shlibs_1.12.14-1_darwin-x86_64.deb
Selecting previously deselected package cairo-shlibs.
(Reading database ... 12987 files and directories currently installed.)
Unpacking cairo-shlibs (from .../cairo-shlibs_1.12.14-1_darwin-x86_64.deb) ...
Setting up cairo-shlibs (1.12.14-1) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/debs/glib2-shlibs_2.22.4-8_darwin-x86_64.deb
Selecting previously deselected package glib2-shlibs.
(Reading database ... 13006 files and directories currently installed.)
Unpacking glib2-shlibs (from .../glib2-shlibs_2.22.4-8_darwin-x86_64.deb) ...
Setting up glib2-shlibs (2.22.4-8) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/gnome/pango1-xft2-ft219-shlibs_1.24.5-9_darwin-x86_64.deb
Selecting previously deselected package pango1-xft2-ft219-shlibs.
(Reading database ... 13233 files and directories currently installed.)
Unpacking pango1-xft2-ft219-shlibs (from .../pango1-xft2-ft219-shlibs_1.24.5-9_darwin-x86_64.deb) ...
Setting up pango1-xft2-ft219-shlibs (1.24.5-9) ...
Clearing dependency_libs of .la files being installed

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/debs/r-base31_3.1.1-2_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base31-shlibs_3.1.1-2_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base31-dev_3.1.1-2_darwin-x86_64.deb
Selecting previously deselected package r-base31.
(Reading database ... 13277 files and directories currently installed.)
Unpacking r-base31 (from .../r-base31_3.1.1-2_darwin-x86_64.deb) ...
Selecting previously deselected package r-base31-shlibs.
Unpacking r-base31-shlibs (from .../r-base31-shlibs_3.1.1-2_darwin-x86_64.deb) ...
Selecting previously deselected package r-base31-dev.
Unpacking r-base31-dev (from .../r-base31-dev_3.1.1-2_darwin-x86_64.deb) ...
Setting up r-base31-shlibs (3.1.1-2) ...

Setting up r-base31-dev (3.1.1-2) ...

Setting up r-base31 (3.1.1-2) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/debs/cran-corpcor-r31_1.6.6-1_darwin-x86_64.deb
Selecting previously deselected package cran-corpcor-r31.
(Reading database ... 15244 files and directories currently installed.)
Unpacking cran-corpcor-r31 (from .../cran-corpcor-r31_1.6.6-1_darwin-x86_64.deb) ...
Setting up cran-corpcor-r31 (1.6.6-1) ...

Setting runtime build-lock...
dpkg-deb -b /sw/build.build/root-fink-buildlock-cran-care-r31-1.1.4-1 /sw/build.build
dpkg-deb: building package `fink-buildlock-cran-care-r31-1.1.4-1' in `/sw/build.build/fink-buildlock-cran-care-r31-1.1.4-1_2014.08.07-06.30.41_darwin-x86_64.deb'.
Installing build-lock package...
/sw/bin/dpkg-lockwait -i /sw/build.build/fink-buildlock-cran-care-r31-1.1.4-1_2014.08.07-06.30.41_darwin-x86_64.deb
Selecting previously deselected package fink-buildlock-cran-care-r31-1.1.4-1.
(Reading database ... 15271 files and directories currently installed.)
Unpacking fink-buildlock-cran-care-r31-1.1.4-1 (from .../fink-buildlock-cran-care-r31-1.1.4-1_2014.08.07-06.30.41_darwin-x86_64.deb) ...
Setting up fink-buildlock-cran-care-r31-1.1.4-1 (2014.08.07-06.30.41) ...

sudo -u fink-bld [ENV] sh -c /tmp/fink.4jpgN
env LANG=C LC_ALL=C /sw/bin/tar  --no-same-owner --no-same-permissions -xvf /sw/src/care_1.1.4.tar.gz
care/
care/inst/
care/inst/doc/
care/inst/doc/index.html
care/inst/doc/brain.R
care/inst/doc/diabetes.R
care/NAMESPACE
care/NEWS
care/data/
care/data/lu2004.rda
care/data/efron2004.rda
care/R/
care/R/slm.R
care/R/slm.models.R
care/R/carscore.R
care/R/predict.slm.R
care/MD5
care/DESCRIPTION
care/man/
care/man/care.package.Rd
care/man/slm.models.Rd
care/man/carscore.Rd
care/man/efron2004.Rd
care/man/slm.Rd
care/man/care-internal.Rd
care/man/lu2004.Rd
sudo -u fink-bld [ENV] sh -c /tmp/fink.1i7kL
/tmp/fink.gDuoi
#!/bin/bash -ev
  export TMPDIR=/sw/build.build/cran-care-r31-1.1.4-1/care/tmp
  BIN_R=/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/bin/R
  
  pushd ..
/sw/build.build/cran-care-r31-1.1.4-1 /sw/build.build/cran-care-r31-1.1.4-1/care
  if [[ 3.1 > 2.15 ]]; then
    $BIN_R --verbose CMD build --no-build-vignettes care
  else
    $BIN_R --verbose CMD build --no-vignettes care
  fi
* checking for file 'care/DESCRIPTION' ... OK
* preparing 'care':
* checking DESCRIPTION meta-information ... OK
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* looking to see if a 'data/datalist' file should be added
* building 'care_1.1.4.tar.gz'

/bin/rm -rf /sw/build.build/root-cran-care-r31-1.1.4-1
/bin/mkdir -p /sw/build.build/root-cran-care-r31-1.1.4-1/sw
/bin/mkdir -p /sw/build.build/root-cran-care-r31-1.1.4-1/DEBIAN
/usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-cran-care-r31-1.1.4-1
sudo -u fink-bld [ENV] sh -c /tmp/fink.LdONz
/tmp/fink.P3q3r
#!/bin/sh -ev
  BIN_R=/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/bin/R
  
  mkdir -p /sw/build.build/root-cran-care-r31-1.1.4-1/sw/lib/R/3.1/site-library
  pushd /sw/build.build/cran-care-r31-1.1.4-1/care/.. && $BIN_R --verbose CMD install --library=/sw/build.build/root-cran-care-r31-1.1.4-1/sw/lib/R/3.1/site-library care
/sw/build.build/cran-care-r31-1.1.4-1 /sw/build.build/cran-care-r31-1.1.4-1/care
* installing *source* package 'care' ...
** package 'care' successfully unpacked and MD5 sums checked
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (care)
sudo -u fink-bld [ENV] sh -c /tmp/fink.ST3CT
/bin/rm -f /sw/build.build/root-cran-care-r31-1.1.4-1/sw/info/dir /sw/build.build/root-cran-care-r31-1.1.4-1/sw/info/dir.old /sw/build.build/root-cran-care-r31-1.1.4-1/sw/share/info/dir /sw/build.build/root-cran-care-r31-1.1.4-1/sw/share/info/dir.old
Reverting ownership of install dir to root
Writing control file...
Writing md5sums file...
env LANG=C LC_ALL=C dpkg-deb -b root-cran-care-r31-1.1.4-1 /sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods
dpkg-deb: building package `cran-care-r31' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods/cran-care-r31_1.1.4-1_darwin-x86_64.deb'.
Removing runtime build-lock...
Removing build-lock package...
/sw/bin/dpkg-lockwait -r fink-buildlock-cran-care-r31-1.1.4-1
(Reading database ... 15272 files and directories currently installed.)
Removing fink-buildlock-cran-care-r31-1.1.4-1 ...