printf ' ' | fink --no-use-binary-dist --yes --build-as-nobody rebuild cran-chemometricswithrdata-r30 2>&1 The package 'cran-chemometricswithrdata-r30' will be built without being installed. Reading build dependency for cran-chemometricswithrdata-r30-0.1.3-1... Reading dependency for cran-chemometricswithrdata-r30-0.1.3-1... Reading build conflict for cran-chemometricswithrdata-r30-0.1.3-1... The package 'r-base30-dev' will be installed. Reading dependency for r-base30-dev-3.0.3-8... Reading runtime dependency for r-base30-dev-3.0.3-8... The package 'r-base30' will be installed. Reading dependency for r-base30-3.0.3-8... Reading runtime dependency for r-base30-3.0.3-8... The package 'r-base30-shlibs' will be installed. Reading dependency for r-base30-shlibs-3.0.3-8... Reading runtime dependency for r-base30-shlibs-3.0.3-8... The package 'flag-sort' will be installed. Reading dependency for flag-sort-0.5-1... Reading runtime dependency for flag-sort-0.5-1... The package 'libicu48-shlibs' will be installed. Reading dependency for libicu48-shlibs-4.8.1.1-2... Reading runtime dependency for libicu48-shlibs-4.8.1.1-2... The package 'libpcre1-shlibs' will be installed. Reading dependency for libpcre1-shlibs-8.35-1... Reading runtime dependency for libpcre1-shlibs-8.35-1... The package 'readline6-shlibs' will be installed. Reading dependency for readline6-shlibs-6.3.6-1... Reading runtime dependency for readline6-shlibs-6.3.6-1... The package 'tcltk' will be installed. Reading dependency for tcltk-8.6.1-104... Reading runtime dependency for tcltk-8.6.1-104... The package 'tcltk-shlibs' will be installed. Reading dependency for tcltk-shlibs-8.6.1-104... Reading runtime dependency for tcltk-shlibs-8.6.1-104... The following package will be rebuilt: cran-chemometricswithrdata-r30 The following 9 additional packages will be installed: flag-sort libicu48-shlibs libpcre1-shlibs r-base30 r-base30-dev r-base30-shlibs readline6-shlibs tcltk tcltk-shlibs Do you want to continue? [Y/n] (assuming default) curl --connect-timeout 30 -f -L -A 'fink/0.37.0' -O http://distfiles.master.finkmirrors.net/distfiles/ChemometricsWithRData_0.1.3.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 59.6M 0 41746 0 0 81147 0 0:12:50 --:--:-- 0:12:50 81060 0 59.6M 0 99666 0 0 55487 0 0:18:47 0:00:01 0:18:46 55462 0 59.6M 0 415k 0 0 164k 0 0:06:10 0:00:02 0:06:08 164k 1 59.6M 1 1162k 0 0 331k 0 0:03:04 0:00:03 0:03:01 331k 2 59.6M 2 1471k 0 0 319k 0 0:03:10 0:00:04 0:03:06 319k 3 59.6M 3 2105k 0 0 380k 0 0:02:40 0:00:05 0:02:35 411k 4 59.6M 4 2557k 0 0 392k 0 0:02:35 0:00:06 0:02:29 522k 5 59.6M 5 3230k 0 0 430k 0 0:02:21 0:00:07 0:02:14 564k 6 59.6M 6 3771k 0 0 435k 0 0:02:20 0:00:08 0:02:12 505k 7 59.6M 7 4367k 0 0 459k 0 0:02:12 0:00:09 0:02:03 590k 7 59.6M 7 4704k 0 0 447k 0 0:02:16 0:00:10 0:02:06 522k 8 59.6M 8 5264k 0 0 457k 0 0:02:13 0:00:11 0:02:02 541k 9 59.6M 9 5837k 0 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All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/flag-sort_0.5-1_darwin-x86_64.deb Selecting previously deselected package flag-sort. (Reading database ... 54747 files and directories currently installed.) Unpacking flag-sort (from .../flag-sort_0.5-1_darwin-x86_64.deb) ... Setting up flag-sort (0.5-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libicu48-shlibs_4.8.1.1-2_darwin-x86_64.deb Selecting previously deselected package libicu48-shlibs. (Reading database ... 54748 files and directories currently installed.) Unpacking libicu48-shlibs (from .../libicu48-shlibs_4.8.1.1-2_darwin-x86_64.deb) ... Setting up libicu48-shlibs (4.8.1.1-2) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libpcre1-shlibs_8.35-1_darwin-x86_64.deb Selecting previously deselected package libpcre1-shlibs. (Reading database ... 54762 files and directories currently installed.) Unpacking libpcre1-shlibs (from .../libpcre1-shlibs_8.35-1_darwin-x86_64.deb) ... Setting up libpcre1-shlibs (8.35-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/readline6-shlibs_6.3.6-1_darwin-x86_64.deb Selecting previously deselected package readline6-shlibs. (Reading database ... 54775 files and directories currently installed.) Unpacking readline6-shlibs (from .../readline6-shlibs_6.3.6-1_darwin-x86_64.deb) ... Setting up readline6-shlibs (6.3.6-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/tcltk_8.6.1-104_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/tcltk-shlibs_8.6.1-104_darwin-x86_64.deb Selecting previously deselected package tcltk. (Reading database ... 54786 files and directories currently installed.) Unpacking tcltk (from .../tcltk_8.6.1-104_darwin-x86_64.deb) ... Selecting previously deselected package tcltk-shlibs. Unpacking tcltk-shlibs (from .../tcltk-shlibs_8.6.1-104_darwin-x86_64.deb) ... Setting up tcltk-shlibs (8.6.1-104) ... Setting up tcltk (8.6.1-104) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/r-base30_3.0.3-8_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base30-shlibs_3.0.3-8_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base30-dev_3.0.3-8_darwin-x86_64.deb Selecting previously deselected package r-base30. (Reading database ... 55261 files and directories currently installed.) Unpacking r-base30 (from .../r-base30_3.0.3-8_darwin-x86_64.deb) ... Selecting previously deselected package r-base30-shlibs. Unpacking r-base30-shlibs (from .../r-base30-shlibs_3.0.3-8_darwin-x86_64.deb) ... Selecting previously deselected package r-base30-dev. Unpacking r-base30-dev (from .../r-base30-dev_3.0.3-8_darwin-x86_64.deb) ... Setting up r-base30-shlibs (3.0.3-8) ... Setting up r-base30-dev (3.0.3-8) ... Setting up r-base30 (3.0.3-8) ... Setting runtime build-lock... dpkg-deb -b /sw/build.build/root-fink-buildlock-cran-chemometricswithrdata-r30-0.1.3-1 /sw/build.build dpkg-deb: building package `fink-buildlock-cran-chemometricswithrdata-r30-0.1.3-1' in `/sw/build.build/fink-buildlock-cran-chemometricswithrdata-r30-0.1.3-1_2014.07.28-01.24.42_darwin-x86_64.deb'. Installing build-lock package... /sw/bin/dpkg-lockwait -i /sw/build.build/fink-buildlock-cran-chemometricswithrdata-r30-0.1.3-1_2014.07.28-01.24.42_darwin-x86_64.deb Selecting previously deselected package fink-buildlock-cran-chemometricswithrdata-r30-0.1.3-1. (Reading database ... 57241 files and directories currently installed.) Unpacking fink-buildlock-cran-chemometricswithrdata-r30-0.1.3-1 (from .../fink-buildlock-cran-chemometricswithrdata-r30-0.1.3-1_2014.07.28-01.24.42_darwin-x86_64.deb) ... Setting up fink-buildlock-cran-chemometricswithrdata-r30-0.1.3-1 (2014.07.28-01.24.42) ... sudo -u fink-bld [ENV] sh -c /tmp/fink.syu6f env LANG=C LC_ALL=C /sw/bin/tar --no-same-owner --no-same-permissions -xvf /sw/src/ChemometricsWithRData_0.1.3.tar.gz ChemometricsWithRData/ ChemometricsWithRData/MD5 ChemometricsWithRData/man/ ChemometricsWithRData/man/shootout.Rd ChemometricsWithRData/man/wines.Rd ChemometricsWithRData/man/prostate.Rd ChemometricsWithRData/man/Prostate2000Raw.Rd ChemometricsWithRData/man/bdata.Rd ChemometricsWithRData/NAMESPACE ChemometricsWithRData/data/ ChemometricsWithRData/data/datalist ChemometricsWithRData/data/bdata.RData ChemometricsWithRData/data/Prostate2000Raw.rda ChemometricsWithRData/data/wines.rda ChemometricsWithRData/data/shootout.RData ChemometricsWithRData/data/prostate.rda ChemometricsWithRData/DESCRIPTION sudo -u fink-bld [ENV] sh -c /tmp/fink.DrKXT /tmp/fink.0otuK #!/bin/bash -ev export TMPDIR=/sw/build.build/cran-chemometricswithrdata-r30-0.1.3-1/ChemometricsWithRData/tmp BIN_R=/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/bin/R pushd .. /sw/build.build/cran-chemometricswithrdata-r30-0.1.3-1 /sw/build.build/cran-chemometricswithrdata-r30-0.1.3-1/ChemometricsWithRData if [[ 3.0 > 2.15 ]]; then $BIN_R --verbose CMD build --no-build-vignettes ChemometricsWithRData else $BIN_R --verbose CMD build --no-vignettes ChemometricsWithRData fi * checking for file 'ChemometricsWithRData/DESCRIPTION' ... OK * preparing 'ChemometricsWithRData': * checking DESCRIPTION meta-information ... OK * checking for LF line-endings in source and make files * checking for empty or unneeded directories * looking to see if a 'data/datalist' file should be added * building 'ChemometricsWithRData_0.1.3.tar.gz' /bin/rm -rf /sw/build.build/root-cran-chemometricswithrdata-r30-0.1.3-1 /bin/mkdir -p /sw/build.build/root-cran-chemometricswithrdata-r30-0.1.3-1/sw /bin/mkdir -p /sw/build.build/root-cran-chemometricswithrdata-r30-0.1.3-1/DEBIAN /usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-cran-chemometricswithrdata-r30-0.1.3-1 sudo -u fink-bld [ENV] sh -c /tmp/fink.YSYuf /tmp/fink.hZ3it #!/bin/sh -ev BIN_R=/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/bin/R mkdir -p /sw/build.build/root-cran-chemometricswithrdata-r30-0.1.3-1/sw/lib/R/3.0/site-library pushd /sw/build.build/cran-chemometricswithrdata-r30-0.1.3-1/ChemometricsWithRData/.. && $BIN_R --verbose CMD install --library=/sw/build.build/root-cran-chemometricswithrdata-r30-0.1.3-1/sw/lib/R/3.0/site-library ChemometricsWithRData /sw/build.build/cran-chemometricswithrdata-r30-0.1.3-1 /sw/build.build/cran-chemometricswithrdata-r30-0.1.3-1/ChemometricsWithRData * installing *source* package 'ChemometricsWithRData' ... ** package 'ChemometricsWithRData' successfully unpacked and MD5 sums checked ** data ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (ChemometricsWithRData) sudo -u fink-bld [ENV] sh -c /tmp/fink.Veyqu /bin/rm -f /sw/build.build/root-cran-chemometricswithrdata-r30-0.1.3-1/sw/info/dir /sw/build.build/root-cran-chemometricswithrdata-r30-0.1.3-1/sw/info/dir.old /sw/build.build/root-cran-chemometricswithrdata-r30-0.1.3-1/sw/share/info/dir /sw/build.build/root-cran-chemometricswithrdata-r30-0.1.3-1/sw/share/info/dir.old Reverting ownership of install dir to root Writing control file... Writing md5sums file... env LANG=C LC_ALL=C dpkg-deb -b root-cran-chemometricswithrdata-r30-0.1.3-1 /sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods dpkg-deb: building package `cran-chemometricswithrdata-r30' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods/cran-chemometricswithrdata-r30_0.1.3-1_darwin-x86_64.deb'. Removing runtime build-lock... Removing build-lock package... /sw/bin/dpkg-lockwait -r fink-buildlock-cran-chemometricswithrdata-r30-0.1.3-1 (Reading database ... 57242 files and directories currently installed.) Removing fink-buildlock-cran-chemometricswithrdata-r30-0.1.3-1 ...