printf ' ' | fink --no-use-binary-dist --yes --build-as-nobody rebuild cran-codetools-r215 2>&1 The package 'cran-codetools-r215' will be built without being installed. Reading build dependency for cran-codetools-r215-0.2-8-1... Reading dependency for cran-codetools-r215-0.2-8-1... Reading build conflict for cran-codetools-r215-0.2-8-1... The package 'r-base215-dev' will be installed. Reading dependency for r-base215-dev-2.15.3-112... Reading runtime dependency for r-base215-dev-2.15.3-112... The package 'r-base215' will be installed. Reading dependency for r-base215-2.15.3-112... Reading runtime dependency for r-base215-2.15.3-112... The package 'r-base215-shlibs' will be installed. Reading dependency for r-base215-shlibs-2.15.3-112... Reading runtime dependency for r-base215-shlibs-2.15.3-112... The following package will be rebuilt: cran-codetools-r215 The following 3 additional packages will be installed: r-base215 r-base215-dev r-base215-shlibs Do you want to continue? [Y/n] (assuming default) curl --connect-timeout 30 -f -L -A 'fink/0.37.0' -O http://distfiles.master.finkmirrors.net/distfiles/codetools_0.2-8.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 12392 100 12392 0 0 10934 0 0:00:01 0:00:01 --:--:-- 10937 Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/r-base215_2.15.3-112_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base215-shlibs_2.15.3-112_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base215-dev_2.15.3-112_darwin-x86_64.deb Selecting previously deselected package r-base215. (Reading database ... 7371 files and directories currently installed.) Unpacking r-base215 (from .../r-base215_2.15.3-112_darwin-x86_64.deb) ... Selecting previously deselected package r-base215-shlibs. Unpacking r-base215-shlibs (from .../r-base215-shlibs_2.15.3-112_darwin-x86_64.deb) ... Selecting previously deselected package r-base215-dev. dpkg: considering removing r-base31-dev in favour of r-base215-dev ... dpkg: yes, will remove r-base31-dev in favour of r-base215-dev. Unpacking r-base215-dev (from .../r-base215-dev_2.15.3-112_darwin-x86_64.deb) ... Setting up r-base215-shlibs (2.15.3-112) ... Setting up r-base215-dev (2.15.3-112) ... Setting up r-base215 (2.15.3-112) ... Setting runtime build-lock... dpkg-deb -b /sw/build.build/root-fink-buildlock-cran-codetools-r215-0.2-8-1 /sw/build.build dpkg-deb: building package `fink-buildlock-cran-codetools-r215-0.2-8-1' in `/sw/build.build/fink-buildlock-cran-codetools-r215-0.2-8-1_2014.07.27-09.36.20_darwin-x86_64.deb'. Installing build-lock package... /sw/bin/dpkg-lockwait -i /sw/build.build/fink-buildlock-cran-codetools-r215-0.2-8-1_2014.07.27-09.36.20_darwin-x86_64.deb Selecting previously deselected package fink-buildlock-cran-codetools-r215-0.2-8-1. (Reading database ... 9473 files and directories currently installed.) Unpacking fink-buildlock-cran-codetools-r215-0.2-8-1 (from .../fink-buildlock-cran-codetools-r215-0.2-8-1_2014.07.27-09.36.20_darwin-x86_64.deb) ... Setting up fink-buildlock-cran-codetools-r215-0.2-8-1 (2014.07.27-09.36.20) ... sudo -u fink-bld [ENV] sh -c /tmp/fink.6Muak env LANG=C LC_ALL=C /sw/bin/tar --no-same-owner --no-same-permissions -xvf /sw/src/codetools_0.2-8.tar.gz codetools/ codetools/R/ codetools/R/codetools.R codetools/man/ codetools/man/findGlobals.Rd codetools/man/checkUsage.Rd codetools/man/showTree.Rd codetools/man/codetools.Rd codetools/NAMESPACE codetools/DESCRIPTION codetools/tests/ codetools/tests/tests.R sudo -u fink-bld [ENV] sh -c /tmp/fink.lWhaB /tmp/fink.h6Lbj #!/bin/bash -ev export TMPDIR=/sw/build.build/cran-codetools-r215-0.2-8-1/codetools/tmp BIN_R=/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R pushd .. /sw/build.build/cran-codetools-r215-0.2-8-1 /sw/build.build/cran-codetools-r215-0.2-8-1/codetools if [[ 2.15 > 2.15 ]]; then $BIN_R --verbose CMD build --no-build-vignettes codetools else $BIN_R --verbose CMD build --no-vignettes codetools fi WARNING: ignoring environment value of R_HOME * checking for file 'codetools/DESCRIPTION' ... OK * preparing 'codetools': * checking DESCRIPTION meta-information ... OK * checking for LF line-endings in source and make files * checking for empty or unneeded directories * building 'codetools_0.2-8.tar.gz' /bin/rm -rf /sw/build.build/root-cran-codetools-r215-0.2-8-1 /bin/mkdir -p /sw/build.build/root-cran-codetools-r215-0.2-8-1/sw /bin/mkdir -p /sw/build.build/root-cran-codetools-r215-0.2-8-1/DEBIAN /usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-cran-codetools-r215-0.2-8-1 sudo -u fink-bld [ENV] sh -c /tmp/fink.y4njD /tmp/fink.KZtbb #!/bin/sh -ev BIN_R=/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R mkdir -p /sw/build.build/root-cran-codetools-r215-0.2-8-1/sw/lib/R/2.15/site-library pushd /sw/build.build/cran-codetools-r215-0.2-8-1/codetools/.. && $BIN_R --verbose CMD install --library=/sw/build.build/root-cran-codetools-r215-0.2-8-1/sw/lib/R/2.15/site-library codetools /sw/build.build/cran-codetools-r215-0.2-8-1 /sw/build.build/cran-codetools-r215-0.2-8-1/codetools WARNING: ignoring environment value of R_HOME * installing *source* package 'codetools' ... ** R ** preparing package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (codetools) sudo -u fink-bld [ENV] sh -c /tmp/fink.PFHXA /bin/rm -f /sw/build.build/root-cran-codetools-r215-0.2-8-1/sw/info/dir /sw/build.build/root-cran-codetools-r215-0.2-8-1/sw/info/dir.old /sw/build.build/root-cran-codetools-r215-0.2-8-1/sw/share/info/dir /sw/build.build/root-cran-codetools-r215-0.2-8-1/sw/share/info/dir.old Reverting ownership of install dir to root Writing control file... Writing md5sums file... env LANG=C LC_ALL=C dpkg-deb -b root-cran-codetools-r215-0.2-8-1 /sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods dpkg-deb: building package `cran-codetools-r215' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods/cran-codetools-r215_0.2-8-1_darwin-x86_64.deb'. Removing runtime build-lock... Removing build-lock package... /sw/bin/dpkg-lockwait -r fink-buildlock-cran-codetools-r215-0.2-8-1 (Reading database ... 9474 files and directories currently installed.) Removing fink-buildlock-cran-codetools-r215-0.2-8-1 ...