printf ' ' | fink --no-use-binary-dist --yes rebuild cran-fastica-r215 2>&1 The package 'cran-fastica-r215' will be built without being installed. Reading build dependency for cran-fastica-r215-1.1-6-1... Reading dependency for cran-fastica-r215-1.1-6-1... Reading build conflict for cran-fastica-r215-1.1-6-1... The following package will be rebuilt: cran-fastica-r215 Setting runtime build-lock... dpkg-deb -b /sw/build.build/root-fink-buildlock-cran-fastica-r215-1.1-6-1 /sw/build.build dpkg-deb: building package `fink-buildlock-cran-fastica-r215-1.1-6-1' in `/sw/build.build/fink-buildlock-cran-fastica-r215-1.1-6-1_2014.07.30-13.34.39_darwin-x86_64.deb'. Installing build-lock package... /sw/bin/dpkg-lockwait -i /sw/build.build/fink-buildlock-cran-fastica-r215-1.1-6-1_2014.07.30-13.34.39_darwin-x86_64.deb Selecting previously deselected package fink-buildlock-cran-fastica-r215-1.1-6-1. (Reading database ... 7471 files and directories currently installed.) Unpacking fink-buildlock-cran-fastica-r215-1.1-6-1 (from .../fink-buildlock-cran-fastica-r215-1.1-6-1_2014.07.30-13.34.39_darwin-x86_64.deb) ... Setting up fink-buildlock-cran-fastica-r215-1.1-6-1 (2014.07.30-13.34.39) ... sudo -u fink-bld [ENV] sh -c /tmp/fink.1pWQl env LANG=C LC_ALL=C /sw/bin/tar --no-same-owner --no-same-permissions -xvf /sw/src/fastICA_1.1-6.tar.gz fastICA/ fastICA/inst/ fastICA/inst/README fastICA/inst/HISTORY fastICA/configure fastICA/cleanup fastICA/src/ fastICA/src/lsame.unused fastICA/src/slapack.unused fastICA/src/Makevars.in fastICA/src/sblas.unused fastICA/src/ica.c fastICA/R/ fastICA/R/fastICA.R fastICA/R/zzz.r fastICA/configure.ac fastICA/DESCRIPTION fastICA/configure.win fastICA/man/ fastICA/man/ica.R.def.Rd fastICA/man/ica.R.par.Rd fastICA/man/fastICA.Rd sudo -u fink-bld [ENV] sh -c /tmp/fink.PELph /tmp/fink.GiwkO #!/bin/bash -ev export TMPDIR=/sw/build.build/cran-fastica-r215-1.1-6-1/fastICA/tmp BIN_R=/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R pushd .. /sw/build.build/cran-fastica-r215-1.1-6-1 /sw/build.build/cran-fastica-r215-1.1-6-1/fastICA $BIN_R --verbose CMD build --no-vignettes fastICA * checking for file 'fastICA/DESCRIPTION' ... OK * preparing 'fastICA': * checking DESCRIPTION meta-information ... OK * cleaning src * running 'cleanup' * checking for LF line-endings in source and make files * checking for empty or unneeded directories * creating default NAMESPACE file * building 'fastICA_1.1-6.tar.gz' /bin/rm -rf /sw/build.build/root-cran-fastica-r215-1.1-6-1 /bin/mkdir -p /sw/build.build/root-cran-fastica-r215-1.1-6-1/sw /bin/mkdir -p /sw/build.build/root-cran-fastica-r215-1.1-6-1/DEBIAN /usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-cran-fastica-r215-1.1-6-1 sudo -u fink-bld [ENV] sh -c /tmp/fink.Ga47W /tmp/fink.yjNT0 #!/bin/sh -ev BIN_R=/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R mkdir -p /sw/build.build/root-cran-fastica-r215-1.1-6-1/sw/lib/R/2.15/site-library pushd /sw/build.build/cran-fastica-r215-1.1-6-1/fastICA/.. && $BIN_R --verbose CMD install --library=/sw/build.build/root-cran-fastica-r215-1.1-6-1/sw/lib/R/2.15/site-library fastICA /sw/build.build/cran-fastica-r215-1.1-6-1 /sw/build.build/cran-fastica-r215-1.1-6-1/fastICA * installing *source* package 'fastICA' ... checking for gcc... flag-sort -r gcc -ffor-scope checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether flag-sort -r gcc -ffor-scope accepts -g... yes checking for flag-sort -r gcc -ffor-scope option to accept ANSI C... none needed checking how to run the C preprocessor... flag-sort -r gcc -ffor-scope -E checking for egrep... grep -E checking for ANSI C header files... rm: conftest.dSYM: is a directory rm: conftest.dSYM: is a directory yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking math.h usability... yes checking math.h presence... yes checking for math.h... yes checking for scopy in -framework Accelerate... no configure: WARNING: could not find scopy in your BLAS library, using our BLAS and LAPACK routines configure: creating ./config.status config.status: creating src/Makevars ** Creating default NAMESPACE file ** libs flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -I/sw/include -fPIC -g -O3 -c ica.c -o ica.o /sw/bin/gfortran-fsf-4.9 -fPIC -g -O3 -c lsame.f -o lsame.o make: /sw/bin/gfortran-fsf-4.9: No such file or directory make: *** [lsame.o] Error 1 ERROR: compilation failed for package 'fastICA' * removing '/sw/build.build/root-cran-fastica-r215-1.1-6-1/sw/lib/R/2.15/site-library/fastICA' ### execution of /tmp/fink.yjNT0 failed, exit code 1 ### execution of /tmp/fink.Ga47W failed, exit code 1 Removing runtime build-lock... Removing build-lock package... /sw/bin/dpkg-lockwait -r fink-buildlock-cran-fastica-r215-1.1-6-1 (Reading database ... 7472 files and directories currently installed.) Removing fink-buildlock-cran-fastica-r215-1.1-6-1 ... Failed: phase installing: cran-fastica-r215-1.1-6-1 failed Before reporting any errors, please run "fink selfupdate" and try again. Also try using "fink configure" to set your maximum build jobs to 1 and attempt to build the package again. If you continue to have issues, please check to see if the FAQ on Fink's website solves the problem. If not, ask on one (not both, please) of these mailing lists: The Fink Users List The Fink Beginners List , with a carbon copy to the maintainer: Jack Howarth Note that this is preferable to emailing just the maintainer directly, since most fink package maintainers do not have access to all possible hardware and software configurations. Please try to include the complete error message in your report. This generally consists of a compiler line starting with e.g. "gcc" or "g++" followed by the actual error output from the compiler. Also include the following system information: Package manager version: 0.37.0 Distribution version: selfupdate-cvs Thu Jul 24 20:26:24 2014, 10.9, x86_64 Trees: local/main stable/main Xcode.app: 5.1.1 Xcode command-line tools: 6.0.0.0.1.1405597879 Max. Fink build jobs: 8