printf '

' | fink --no-use-binary-dist --yes  --build-as-nobody rebuild cran-fingerprint-r31 2>&1
The package 'cran-fingerprint-r31' will be built without being installed.
Reading build dependency for cran-fingerprint-r31-3.5.2-1...
Reading dependency for cran-fingerprint-r31-3.5.2-1...
Reading build conflict for cran-fingerprint-r31-3.5.2-1...
The package 'r-base31-dev' will be installed.
Reading dependency for r-base31-dev-3.1.1-2...
Reading runtime dependency for r-base31-dev-3.1.1-2...
The package 'libgettext8-dev' will be installed.
Reading dependency for libgettext8-dev-0.18.3.1-2...
Reading runtime dependency for libgettext8-dev-0.18.3.1-2...
The package 'r-base31' will be installed.
Reading dependency for r-base31-3.1.1-2...
Reading runtime dependency for r-base31-3.1.1-2...
The package 'r-base31-shlibs' will be installed.
Reading dependency for r-base31-shlibs-3.1.1-2...
Reading runtime dependency for r-base31-shlibs-3.1.1-2...
The package 'gettext-bin' will be installed.
Reading dependency for gettext-bin-0.18.3.1-2...
Reading runtime dependency for gettext-bin-0.18.3.1-2...
The package 'flag-sort' will be installed.
Reading dependency for flag-sort-0.5-1...
Reading runtime dependency for flag-sort-0.5-1...
The package 'cairo-shlibs' will be installed.
Reading dependency for cairo-shlibs-1.12.14-1...
Reading runtime dependency for cairo-shlibs-1.12.14-1...
The package 'gcc49-shlibs' will be installed.
Reading dependency for gcc49-shlibs-4.9.1-1000...
Reading runtime dependency for gcc49-shlibs-4.9.1-1000...
The package 'glib2-shlibs' will be installed.
Reading dependency for glib2-shlibs-2.22.4-8...
Reading runtime dependency for glib2-shlibs-2.22.4-8...
The package 'libicu48-shlibs' will be installed.
Reading dependency for libicu48-shlibs-4.8.1.1-2...
Reading runtime dependency for libicu48-shlibs-4.8.1.1-2...
The package 'libjpeg9-shlibs' will be installed.
Reading dependency for libjpeg9-shlibs-9a-1...
Reading runtime dependency for libjpeg9-shlibs-9a-1...
The package 'liblzma5-shlibs' will be installed.
Reading dependency for liblzma5-shlibs-5.0.5-2...
Reading runtime dependency for liblzma5-shlibs-5.0.5-2...
The package 'libpng16-shlibs' will be installed.
Reading dependency for libpng16-shlibs-1.6.12-1...
Reading runtime dependency for libpng16-shlibs-1.6.12-1...
The package 'libtiff5-shlibs' will be installed.
Reading dependency for libtiff5-shlibs-4.0.3-5...
Reading runtime dependency for libtiff5-shlibs-4.0.3-5...
The package 'pango1-xft2-ft219-shlibs' will be installed.
Reading dependency for pango1-xft2-ft219-shlibs-1.24.5-9...
Reading runtime dependency for pango1-xft2-ft219-shlibs-1.24.5-9...
The package 'libpcre1-shlibs' will be installed.
Reading dependency for libpcre1-shlibs-8.35-1...
Reading runtime dependency for libpcre1-shlibs-8.35-1...
The package 'readline6-shlibs' will be installed.
Reading dependency for readline6-shlibs-6.3.6-1...
Reading runtime dependency for readline6-shlibs-6.3.6-1...
The package 'tcltk' will be installed.
Reading dependency for tcltk-8.6.1-104...
Reading runtime dependency for tcltk-8.6.1-104...
The package 'fontconfig2-shlibs' will be installed.
Reading dependency for fontconfig2-shlibs-2.10.2-1...
Reading runtime dependency for fontconfig2-shlibs-2.10.2-1...
The package 'freetype219-shlibs' will be installed.
Reading dependency for freetype219-shlibs-2.4.12-1...
Reading runtime dependency for freetype219-shlibs-2.4.12-1...
The package 'pixman-shlibs' will be installed.
Reading dependency for pixman-shlibs-0.32.4-1...
Reading runtime dependency for pixman-shlibs-0.32.4-1...
The package 'xdg-base' will be installed.
Reading dependency for xdg-base-0.8-2...
Reading runtime dependency for xdg-base-0.8-2...
The package 'libjbig-shlibs' will be installed.
Reading dependency for libjbig-shlibs-2.0-1...
Reading runtime dependency for libjbig-shlibs-2.0-1...
The package 'libthai-shlibs' will be installed.
Reading dependency for libthai-shlibs-0.1.20-1...
Reading runtime dependency for libthai-shlibs-0.1.20-1...
The package 'xft2-shlibs' will be installed.
Reading dependency for xft2-shlibs-2.2.0-3...
Reading runtime dependency for xft2-shlibs-2.2.0-3...
The package 'tcltk-shlibs' will be installed.
Reading dependency for tcltk-shlibs-8.6.1-104...
Reading runtime dependency for tcltk-shlibs-8.6.1-104...
The package 'fontconfig-config' will be installed.
Reading dependency for fontconfig-config-2.10.2-1...
Reading runtime dependency for fontconfig-config-2.10.2-1...
The package 'expat1-shlibs' will be installed.
Reading dependency for expat1-shlibs-2.1.0-1...
Reading runtime dependency for expat1-shlibs-2.1.0-1...
The package 'libdatrie1-shlibs' will be installed.
Reading dependency for libdatrie1-shlibs-0.2.8-2...
Reading runtime dependency for libdatrie1-shlibs-0.2.8-2...
The package 'libthai' will be installed.
Reading dependency for libthai-0.1.20-1...
Reading runtime dependency for libthai-0.1.20-1...
The following package will be rebuilt:
 cran-fingerprint-r31
The following 30 additional packages will be installed:
 cairo-shlibs expat1-shlibs flag-sort fontconfig-config fontconfig2-shlibs
 freetype219-shlibs gcc49-shlibs gettext-bin glib2-shlibs libdatrie1-shlibs
 libgettext8-dev libicu48-shlibs libjbig-shlibs libjpeg9-shlibs
 liblzma5-shlibs libpcre1-shlibs libpng16-shlibs libthai libthai-shlibs
 libtiff5-shlibs pango1-xft2-ft219-shlibs pixman-shlibs r-base31 r-base31-dev
 r-base31-shlibs readline6-shlibs tcltk tcltk-shlibs xdg-base xft2-shlibs
Do you want to continue? [Y/n] (assuming default)
Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/base/expat1-shlibs_2.1.0-1_darwin-x86_64.deb
Selecting previously deselected package expat1-shlibs.
(Reading database ... 4296 files and directories currently installed.)
Unpacking expat1-shlibs (from .../expat1-shlibs_2.1.0-1_darwin-x86_64.deb) ...
Setting up expat1-shlibs (2.1.0-1) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/debs/flag-sort_0.5-1_darwin-x86_64.deb
Selecting previously deselected package flag-sort.
(Reading database ... 4301 files and directories currently installed.)
Unpacking flag-sort (from .../flag-sort_0.5-1_darwin-x86_64.deb) ...
Setting up flag-sort (0.5-1) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/freetype219-shlibs_2.4.12-1_darwin-x86_64.deb
Selecting previously deselected package freetype219-shlibs.
(Reading database ... 4302 files and directories currently installed.)
Unpacking freetype219-shlibs (from .../freetype219-shlibs_2.4.12-1_darwin-x86_64.deb) ...
Setting up freetype219-shlibs (2.4.12-1) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/gcc49-shlibs_4.9.1-1000_darwin-x86_64.deb
Selecting previously deselected package gcc49-shlibs.
(Reading database ... 4313 files and directories currently installed.)
Unpacking gcc49-shlibs (from .../gcc49-shlibs_4.9.1-1000_darwin-x86_64.deb) ...
Setting up gcc49-shlibs (4.9.1-1000) ...
Clearing dependency_libs of .la files being installed

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libdatrie1-shlibs_0.2.8-2_darwin-x86_64.deb
Selecting previously deselected package libdatrie1-shlibs.
(Reading database ... 4358 files and directories currently installed.)
Unpacking libdatrie1-shlibs (from .../libdatrie1-shlibs_0.2.8-2_darwin-x86_64.deb) ...
Setting up libdatrie1-shlibs (0.2.8-2) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/base/libgettext8-dev_0.18.3.1-2_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/base/gettext-bin_0.18.3.1-2_darwin-x86_64.deb
Selecting previously deselected package libgettext8-dev.
(Reading database ... 4365 files and directories currently installed.)
Unpacking libgettext8-dev (from .../libgettext8-dev_0.18.3.1-2_darwin-x86_64.deb) ...
Selecting previously deselected package gettext-bin.
Unpacking gettext-bin (from .../gettext-bin_0.18.3.1-2_darwin-x86_64.deb) ...
Setting up gettext-bin (0.18.3.1-2) ...

Setting up libgettext8-dev (0.18.3.1-2) ...
Clearing dependency_libs of .la files being installed

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libicu48-shlibs_4.8.1.1-2_darwin-x86_64.deb
Selecting previously deselected package libicu48-shlibs.
(Reading database ... 4459 files and directories currently installed.)
Unpacking libicu48-shlibs (from .../libicu48-shlibs_4.8.1.1-2_darwin-x86_64.deb) ...
Setting up libicu48-shlibs (4.8.1.1-2) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/libjbig-shlibs_2.0-1_darwin-x86_64.deb
Selecting previously deselected package libjbig-shlibs.
(Reading database ... 4473 files and directories currently installed.)
Unpacking libjbig-shlibs (from .../libjbig-shlibs_2.0-1_darwin-x86_64.deb) ...
Setting up libjbig-shlibs (2.0-1) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/libjpeg9-shlibs_9a-1_darwin-x86_64.deb
Selecting previously deselected package libjpeg9-shlibs.
(Reading database ... 4480 files and directories currently installed.)
Unpacking libjpeg9-shlibs (from .../libjpeg9-shlibs_9a-1_darwin-x86_64.deb) ...
Setting up libjpeg9-shlibs (9a-1) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/utils/liblzma5-shlibs_5.0.5-2_darwin-x86_64.deb
Selecting previously deselected package liblzma5-shlibs.
(Reading database ... 4483 files and directories currently installed.)
Unpacking liblzma5-shlibs (from .../liblzma5-shlibs_5.0.5-2_darwin-x86_64.deb) ...
Setting up liblzma5-shlibs (5.0.5-2) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libpcre1-shlibs_8.35-1_darwin-x86_64.deb
Selecting previously deselected package libpcre1-shlibs.
(Reading database ... 4494 files and directories currently installed.)
Unpacking libpcre1-shlibs (from .../libpcre1-shlibs_8.35-1_darwin-x86_64.deb) ...
Setting up libpcre1-shlibs (8.35-1) ...

Reading buildlock packages...
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/libpng16-shlibs_1.6.12-1_darwin-x86_64.deb
Selecting previously deselected package libpng16-shlibs.
(Reading database ... 4507 files and directories currently installed.)
Unpacking libpng16-shlibs (from .../libpng16-shlibs_1.6.12-1_darwin-x86_64.deb) ...
Setting up libpng16-shlibs (1.6.12-1) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libthai-shlibs_0.1.20-1_darwin-x86_64.deb /sw/fink/debs/libthai_0.1.20-1_darwin-x86_64.deb
Selecting previously deselected package libthai-shlibs.
(Reading database ... 4515 files and directories currently installed.)
Unpacking libthai-shlibs (from .../libthai-shlibs_0.1.20-1_darwin-x86_64.deb) ...
Selecting previously deselected package libthai.
Unpacking libthai (from .../libthai_0.1.20-1_darwin-x86_64.deb) ...
Setting up libthai (0.1.20-1) ...

Setting up libthai-shlibs (0.1.20-1) ...

Reading buildlock packages...
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/sw/bin/dpkg-lockwait -i /sw/fink/debs/libtiff5-shlibs_4.0.3-5_darwin-x86_64.deb
Selecting previously deselected package libtiff5-shlibs.
(Reading database ... 4530 files and directories currently installed.)
Unpacking libtiff5-shlibs (from .../libtiff5-shlibs_4.0.3-5_darwin-x86_64.deb) ...
Setting up libtiff5-shlibs (4.0.3-5) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/pixman-shlibs_0.32.4-1_darwin-x86_64.deb
Selecting previously deselected package pixman-shlibs.
(Reading database ... 4535 files and directories currently installed.)
Unpacking pixman-shlibs (from .../pixman-shlibs_0.32.4-1_darwin-x86_64.deb) ...
Setting up pixman-shlibs (0.32.4-1) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/readline6-shlibs_6.3.6-1_darwin-x86_64.deb
Selecting previously deselected package readline6-shlibs.
(Reading database ... 4539 files and directories currently installed.)
Unpacking readline6-shlibs (from .../readline6-shlibs_6.3.6-1_darwin-x86_64.deb) ...
Setting up readline6-shlibs (6.3.6-1) ...

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/sw/bin/dpkg-lockwait -i /sw/fink/debs/xdg-base_0.8-2_darwin-x86_64.deb
Selecting previously deselected package xdg-base.
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Setting up xdg-base (0.8-2) ...

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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/x11/fontconfig2-shlibs_2.10.2-1_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/x11/fontconfig-config_2.10.2-1_darwin-x86_64.deb
Selecting previously deselected package fontconfig2-shlibs.
(Reading database ... 4552 files and directories currently installed.)
Unpacking fontconfig2-shlibs (from .../fontconfig2-shlibs_2.10.2-1_darwin-x86_64.deb) ...
Selecting previously deselected package fontconfig-config.
Unpacking fontconfig-config (from .../fontconfig-config_2.10.2-1_darwin-x86_64.deb) ...
Setting up fontconfig-config (2.10.2-1) ...

Setting up fontconfig2-shlibs (2.10.2-1) ...

Reading buildlock packages...
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/sw/bin/dpkg-lockwait -i /sw/fink/debs/glib2-shlibs_2.22.4-8_darwin-x86_64.deb
Selecting previously deselected package glib2-shlibs.
(Reading database ... 4637 files and directories currently installed.)
Unpacking glib2-shlibs (from .../glib2-shlibs_2.22.4-8_darwin-x86_64.deb) ...
Setting up glib2-shlibs (2.22.4-8) ...

Reading buildlock packages...
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/x11/xft2-shlibs_2.2.0-3_darwin-x86_64.deb
Selecting previously deselected package xft2-shlibs.
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Unpacking xft2-shlibs (from .../xft2-shlibs_2.2.0-3_darwin-x86_64.deb) ...
Setting up xft2-shlibs (2.2.0-3) ...

Reading buildlock packages...
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/cairo-shlibs_1.12.14-1_darwin-x86_64.deb
Selecting previously deselected package cairo-shlibs.
(Reading database ... 4865 files and directories currently installed.)
Unpacking cairo-shlibs (from .../cairo-shlibs_1.12.14-1_darwin-x86_64.deb) ...
Setting up cairo-shlibs (1.12.14-1) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/gnome/pango1-xft2-ft219-shlibs_1.24.5-9_darwin-x86_64.deb
Selecting previously deselected package pango1-xft2-ft219-shlibs.
(Reading database ... 4884 files and directories currently installed.)
Unpacking pango1-xft2-ft219-shlibs (from .../pango1-xft2-ft219-shlibs_1.24.5-9_darwin-x86_64.deb) ...
Setting up pango1-xft2-ft219-shlibs (1.24.5-9) ...
Clearing dependency_libs of .la files being installed

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/debs/tcltk_8.6.1-104_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/tcltk-shlibs_8.6.1-104_darwin-x86_64.deb
Selecting previously deselected package tcltk.
(Reading database ... 4928 files and directories currently installed.)
Unpacking tcltk (from .../tcltk_8.6.1-104_darwin-x86_64.deb) ...
Selecting previously deselected package tcltk-shlibs.
Unpacking tcltk-shlibs (from .../tcltk-shlibs_8.6.1-104_darwin-x86_64.deb) ...
Setting up tcltk-shlibs (8.6.1-104) ...

Setting up tcltk (8.6.1-104) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/debs/r-base31_3.1.1-2_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base31-shlibs_3.1.1-2_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base31-dev_3.1.1-2_darwin-x86_64.deb
Selecting previously deselected package r-base31.
(Reading database ... 5404 files and directories currently installed.)
Unpacking r-base31 (from .../r-base31_3.1.1-2_darwin-x86_64.deb) ...
Selecting previously deselected package r-base31-shlibs.
Unpacking r-base31-shlibs (from .../r-base31-shlibs_3.1.1-2_darwin-x86_64.deb) ...
Selecting previously deselected package r-base31-dev.
Unpacking r-base31-dev (from .../r-base31-dev_3.1.1-2_darwin-x86_64.deb) ...
Setting up r-base31-shlibs (3.1.1-2) ...

Setting up r-base31-dev (3.1.1-2) ...

Setting up r-base31 (3.1.1-2) ...

Setting runtime build-lock...
dpkg-deb -b /sw/build.build/root-fink-buildlock-cran-fingerprint-r31-3.5.2-1 /sw/build.build
dpkg-deb: building package `fink-buildlock-cran-fingerprint-r31-3.5.2-1' in `/sw/build.build/fink-buildlock-cran-fingerprint-r31-3.5.2-1_2014.07.27-18.23.58_darwin-x86_64.deb'.
Installing build-lock package...
/sw/bin/dpkg-lockwait -i /sw/build.build/fink-buildlock-cran-fingerprint-r31-3.5.2-1_2014.07.27-18.23.58_darwin-x86_64.deb
Selecting previously deselected package fink-buildlock-cran-fingerprint-r31-3.5.2-1.
(Reading database ... 7371 files and directories currently installed.)
Unpacking fink-buildlock-cran-fingerprint-r31-3.5.2-1 (from .../fink-buildlock-cran-fingerprint-r31-3.5.2-1_2014.07.27-18.23.58_darwin-x86_64.deb) ...
Setting up fink-buildlock-cran-fingerprint-r31-3.5.2-1 (2014.07.27-18.23.58) ...

sudo -u fink-bld [ENV] sh -c /tmp/fink.6y2TL
env LANG=C LC_ALL=C /sw/bin/tar  --no-same-owner --no-same-permissions -xvf /sw/src/fingerprint_3.5.2.tar.gz
fingerprint/
fingerprint/inst/
fingerprint/inst/unitTests/
fingerprint/inst/unitTests/reportSummary.txt
fingerprint/inst/unitTests/Makefile
fingerprint/inst/unitTests/test.ecfp
fingerprint/inst/unitTests/report.html
fingerprint/inst/unitTests/runit.fp.R
fingerprint/inst/unitTests/bits.fps
fingerprint/inst/unitTests/report.txt
fingerprint/tests/
fingerprint/tests/doRUnit.R
fingerprint/src/
fingerprint/src/fpdistance.c
fingerprint/src/readfps.c
fingerprint/NAMESPACE
fingerprint/R/
fingerprint/R/balance.R
fingerprint/R/featurefp.R
fingerprint/R/bitimp.R
fingerprint/R/feature.R
fingerprint/R/ops.R
fingerprint/R/fingerprint.R
fingerprint/R/bitspec.R
fingerprint/R/misc.R
fingerprint/R/read.R
fingerprint/R/zzz.R
fingerprint/R/matrix.R
fingerprint/MD5
fingerprint/DESCRIPTION
fingerprint/ChangeLog
fingerprint/man/
fingerprint/man/vec.Rd
fingerprint/man/show.Rd
fingerprint/man/linefunc.Rd
fingerprint/man/distance-methods.Rd
fingerprint/man/shannon.Rd
fingerprint/man/count-methods.Rd
fingerprint/man/mat.Rd
fingerprint/man/length.Rd
fingerprint/man/string.Rd
fingerprint/man/facmat.Rd
fingerprint/man/c.Rd
fingerprint/man/feature-methods.Rd
fingerprint/man/fplogical.Rd
fingerprint/man/bitspec.Rd
fingerprint/man/feature.Rd
fingerprint/man/read.Rd
fingerprint/man/fold.Rd
fingerprint/man/bitimp.Rd
fingerprint/man/featvec.Rd
fingerprint/man/balance.Rd
fingerprint/man/fingerprint.Rd
fingerprint/man/sim.Rd
fingerprint/man/rndfp.Rd
fingerprint/INDEX
sudo -u fink-bld [ENV] sh -c /tmp/fink.i2JgB
/tmp/fink.EMaki
#!/bin/bash -ev
  export TMPDIR=/sw/build.build/cran-fingerprint-r31-3.5.2-1/fingerprint/tmp
  BIN_R=/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/bin/R
  
  pushd ..
/sw/build.build/cran-fingerprint-r31-3.5.2-1 /sw/build.build/cran-fingerprint-r31-3.5.2-1/fingerprint
  if [[ 3.1 > 2.15 ]]; then
    $BIN_R --verbose CMD build --no-build-vignettes fingerprint
  else
    $BIN_R --verbose CMD build --no-vignettes fingerprint
  fi
* checking for file 'fingerprint/DESCRIPTION' ... OK
* preparing 'fingerprint':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* checking whether 'INDEX' is up-to-date ... NO
* use '--force' to remove the existing 'INDEX'
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'fingerprint_3.5.2.tar.gz'

/bin/rm -rf /sw/build.build/root-cran-fingerprint-r31-3.5.2-1
/bin/mkdir -p /sw/build.build/root-cran-fingerprint-r31-3.5.2-1/sw
/bin/mkdir -p /sw/build.build/root-cran-fingerprint-r31-3.5.2-1/DEBIAN
/usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-cran-fingerprint-r31-3.5.2-1
sudo -u fink-bld [ENV] sh -c /tmp/fink.Iw0sd
/tmp/fink.PbTVZ
#!/bin/sh -ev
  BIN_R=/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/bin/R
  
  mkdir -p /sw/build.build/root-cran-fingerprint-r31-3.5.2-1/sw/lib/R/3.1/site-library
  pushd /sw/build.build/cran-fingerprint-r31-3.5.2-1/fingerprint/.. && $BIN_R --verbose CMD install --library=/sw/build.build/root-cran-fingerprint-r31-3.5.2-1/sw/lib/R/3.1/site-library fingerprint
/sw/build.build/cran-fingerprint-r31-3.5.2-1 /sw/build.build/cran-fingerprint-r31-3.5.2-1/fingerprint
* installing *source* package 'fingerprint' ...
** package 'fingerprint' successfully unpacked and MD5 sums checked
** libs
flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/include -DNDEBUG  -I/sw/include    -fPIC  -g -O3  -c fpdistance.c -o fpdistance.o
flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/include -DNDEBUG  -I/sw/include    -fPIC  -g -O3  -c readfps.c -o readfps.o
flag-sort -r gcc -ffor-scope -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/sw/lib -o fingerprint.dylib fpdistance.o readfps.o -L/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/lib -lR -lintl -Wl,-framework -Wl,CoreFoundation
installing to /sw/build.build/root-cran-fingerprint-r31-3.5.2-1/sw/lib/R/3.1/site-library/fingerprint/libs
** R
** inst
** preparing package for lazy loading
Creating a generic function for 'xor' from package 'base' in package 'fingerprint'
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (fingerprint)
  install_name_tool -id /sw/lib/R/3.1/site-library/fingerprint/libs/fingerprint.dylib /sw/build.build/root-cran-fingerprint-r31-3.5.2-1/sw/lib/R/3.1/site-library/fingerprint/libs/fingerprint.dylib
sudo -u fink-bld [ENV] sh -c /tmp/fink.aXqHd
/bin/rm -f /sw/build.build/root-cran-fingerprint-r31-3.5.2-1/sw/info/dir /sw/build.build/root-cran-fingerprint-r31-3.5.2-1/sw/info/dir.old /sw/build.build/root-cran-fingerprint-r31-3.5.2-1/sw/share/info/dir /sw/build.build/root-cran-fingerprint-r31-3.5.2-1/sw/share/info/dir.old
Reverting ownership of install dir to root
Writing control file...
Creating shlibs files...
Writing md5sums file...
env LANG=C LC_ALL=C dpkg-deb -b root-cran-fingerprint-r31-3.5.2-1 /sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods
dpkg-deb: building package `cran-fingerprint-r31' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods/cran-fingerprint-r31_3.5.2-1_darwin-x86_64.deb'.
Removing runtime build-lock...
Removing build-lock package...
/sw/bin/dpkg-lockwait -r fink-buildlock-cran-fingerprint-r31-3.5.2-1
(Reading database ... 7372 files and directories currently installed.)
Removing fink-buildlock-cran-fingerprint-r31-3.5.2-1 ...