printf ' ' | fink --no-use-binary-dist --yes --build-as-nobody rebuild cran-foreign-r30 2>&1 The package 'cran-foreign-r30' will be built without being installed. Reading build dependency for cran-foreign-r30-0.8-61-1... Reading dependency for cran-foreign-r30-0.8-61-1... Reading build conflict for cran-foreign-r30-0.8-61-1... The package 'r-base30-dev' will be installed. Reading dependency for r-base30-dev-3.0.3-8... Reading runtime dependency for r-base30-dev-3.0.3-8... The package 'r-base30' will be installed. Reading dependency for r-base30-3.0.3-8... Reading runtime dependency for r-base30-3.0.3-8... The package 'r-base30-shlibs' will be installed. Reading dependency for r-base30-shlibs-3.0.3-8... Reading runtime dependency for r-base30-shlibs-3.0.3-8... The following package will be rebuilt: cran-foreign-r30 The following 3 additional packages will be installed: r-base30 r-base30-dev r-base30-shlibs Do you want to continue? [Y/n] (assuming default) Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/r-base30_3.0.3-8_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base30-shlibs_3.0.3-8_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base30-dev_3.0.3-8_darwin-x86_64.deb Selecting previously deselected package r-base30. (Reading database ... 7557 files and directories currently installed.) Unpacking r-base30 (from .../r-base30_3.0.3-8_darwin-x86_64.deb) ... Selecting previously deselected package r-base30-shlibs. Unpacking r-base30-shlibs (from .../r-base30-shlibs_3.0.3-8_darwin-x86_64.deb) ... Selecting previously deselected package r-base30-dev. dpkg: considering removing r-base215-dev in favour of r-base30-dev ... dpkg: yes, will remove r-base215-dev in favour of r-base30-dev. Unpacking r-base30-dev (from .../r-base30-dev_3.0.3-8_darwin-x86_64.deb) ... Setting up r-base30-shlibs (3.0.3-8) ... Setting up r-base30-dev (3.0.3-8) ... Setting up r-base30 (3.0.3-8) ... Setting runtime build-lock... dpkg-deb -b /sw/build.build/root-fink-buildlock-cran-foreign-r30-0.8-61-1 /sw/build.build dpkg-deb: building package `fink-buildlock-cran-foreign-r30-0.8-61-1' in `/sw/build.build/fink-buildlock-cran-foreign-r30-0.8-61-1_2014.07.29-07.31.21_darwin-x86_64.deb'. Installing build-lock package... /sw/bin/dpkg-lockwait -i /sw/build.build/fink-buildlock-cran-foreign-r30-0.8-61-1_2014.07.29-07.31.21_darwin-x86_64.deb Selecting previously deselected package fink-buildlock-cran-foreign-r30-0.8-61-1. (Reading database ... 9487 files and directories currently installed.) Unpacking fink-buildlock-cran-foreign-r30-0.8-61-1 (from .../fink-buildlock-cran-foreign-r30-0.8-61-1_2014.07.29-07.31.21_darwin-x86_64.deb) ... Setting up fink-buildlock-cran-foreign-r30-0.8-61-1 (2014.07.29-07.31.21) ... sudo -u fink-bld [ENV] sh -c /tmp/fink.NrSjD env LANG=C LC_ALL=C /sw/bin/tar --no-same-owner --no-same-permissions -xvf /sw/src/foreign_0.8-61.tar.gz foreign/ foreign/po/ foreign/po/R-fr.po foreign/po/de.po foreign/po/pl.po foreign/po/R-de.po foreign/po/fr.po foreign/po/foreign.pot foreign/po/R-foreign.pot foreign/po/R-pl.po foreign/BUGS foreign/inst/ foreign/inst/po/ foreign/inst/po/pl/ foreign/inst/po/pl/LC_MESSAGES/ foreign/inst/po/pl/LC_MESSAGES/foreign.mo foreign/inst/po/pl/LC_MESSAGES/R-foreign.mo foreign/inst/po/en@quot/ foreign/inst/po/en@quot/LC_MESSAGES/ foreign/inst/po/en@quot/LC_MESSAGES/foreign.mo foreign/inst/po/en@quot/LC_MESSAGES/R-foreign.mo foreign/inst/po/fr/ foreign/inst/po/fr/LC_MESSAGES/ foreign/inst/po/fr/LC_MESSAGES/foreign.mo foreign/inst/po/fr/LC_MESSAGES/R-foreign.mo foreign/inst/po/de/ foreign/inst/po/de/LC_MESSAGES/ foreign/inst/po/de/LC_MESSAGES/foreign.mo foreign/inst/po/de/LC_MESSAGES/R-foreign.mo foreign/inst/files/ foreign/inst/files/sids.dbf foreign/inst/files/Iris.syd foreign/inst/files/HillRace.SYD foreign/inst/COPYRIGHTS foreign/tests/ foreign/tests/sample100.por foreign/tests/xxx12.dta foreign/tests/sample100.sav foreign/tests/mval_bug.Rout.save foreign/tests/dumpdata foreign/tests/xport.Rout.save foreign/tests/mySobj foreign/tests/create-dumpdata.S foreign/tests/pbc.por foreign/tests/S3.R foreign/tests/mval_bug.sav foreign/tests/tsdumpdata foreign/tests/OneVarTwoValLabels.dta foreign/tests/auto8.dta foreign/tests/minitab.R foreign/tests/octave.m foreign/tests/spss.Rout.save foreign/tests/contact-lenses.arff foreign/tests/pbc.sys foreign/tests/test.xpt foreign/tests/sun6.dta foreign/tests/testEmpty.xpt foreign/tests/mval_bug.R foreign/tests/download.R foreign/tests/Alfalfa.xpt foreign/tests/xport.R foreign/tests/pbcold.sav foreign/tests/testEmpty.R foreign/tests/electric.sav foreign/tests/testEmpty.Rout.save foreign/tests/minitab.Rout.save foreign/tests/spss_long.sav foreign/tests/arff.Rout.save foreign/tests/keep/ foreign/tests/keep/datafile.dat foreign/tests/keep/codefile.sps foreign/tests/writeForeignSPSS.R foreign/tests/octave.dat foreign/tests/stata.R foreign/tests/compressed.dta foreign/tests/octave.R foreign/tests/MLLabelsWithNotesChar.dta foreign/tests/datefactor.dta foreign/tests/arff.R foreign/tests/electric.por foreign/tests/writeForeignSPSS.Rout.save foreign/tests/spss.R foreign/tests/pbc.sav foreign/tests/octave.Rout.save foreign/tests/stata.Rout.save foreign/tests/S3.Rout.save foreign/tests/sas.R foreign/tests/ex1-51.mtp foreign/tests/pc5.dta foreign/tests/stata8mac.dta foreign/tests/stata7se.dta foreign/src/ foreign/src/format.h foreign/src/sfmP.h foreign/src/R_systat.c foreign/src/SASxport.h foreign/src/sfm-read.c foreign/src/stataread.c foreign/src/dbfopen.c foreign/src/avl.h foreign/src/pfm.h foreign/src/file-handle.h foreign/src/format.c foreign/src/minitab.c foreign/src/var.h foreign/src/swap_bytes.h foreign/src/Rdbfwrite.c foreign/src/sfm.h foreign/src/shapefil.h foreign/src/file-handle.c foreign/src/Rdbfread.c foreign/src/pspp-format-def.h foreign/src/foreign.h foreign/src/spss.c foreign/src/pfm-read.c foreign/src/init.c foreign/src/SASxport.c foreign/src/avl.c foreign/NAMESPACE foreign/GPL-2 foreign/R/ foreign/R/Sread.R foreign/R/minitab.R foreign/R/writeForeignCode.R foreign/R/read.ssd.R foreign/R/xport.R foreign/R/read.epiinfo.R foreign/R/writeForeignSAS.R foreign/R/R_systat.R foreign/R/octave.R foreign/R/read.dta.R foreign/R/dbf.R foreign/R/arff.R foreign/R/spss.R foreign/R/zzz.R foreign/MD5 foreign/DESCRIPTION foreign/COPYRIGHTS foreign/ChangeLog foreign/man/ foreign/man/read.epiinfo.Rd foreign/man/write.dta.Rd foreign/man/read.ssd.Rd foreign/man/read.mtp.Rd foreign/man/read.arff.Rd foreign/man/read.octave.Rd foreign/man/read.xport.Rd foreign/man/lookup.xport.Rd foreign/man/write.arff.Rd foreign/man/write.foreign.Rd foreign/man/read.systat.Rd foreign/man/write.dbf.Rd foreign/man/read.S.Rd foreign/man/read.dbf.Rd foreign/man/read.dta.Rd foreign/man/read.spss.Rd sudo -u fink-bld [ENV] sh -c /tmp/fink.5m7VJ /tmp/fink.xrTxX #!/bin/bash -ev export TMPDIR=/sw/build.build/cran-foreign-r30-0.8-61-1/foreign/tmp BIN_R=/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/bin/R pushd .. /sw/build.build/cran-foreign-r30-0.8-61-1 /sw/build.build/cran-foreign-r30-0.8-61-1/foreign $BIN_R --verbose CMD build --no-build-vignettes foreign * checking for file 'foreign/DESCRIPTION' ... OK * preparing 'foreign': * checking DESCRIPTION meta-information ... OK * cleaning src * checking for LF line-endings in source and make files * checking for empty or unneeded directories * building 'foreign_0.8-61.tar.gz' /bin/rm -rf /sw/build.build/root-cran-foreign-r30-0.8-61-1 /bin/mkdir -p /sw/build.build/root-cran-foreign-r30-0.8-61-1/sw /bin/mkdir -p /sw/build.build/root-cran-foreign-r30-0.8-61-1/DEBIAN /usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-cran-foreign-r30-0.8-61-1 sudo -u fink-bld [ENV] sh -c /tmp/fink.gmrjM /tmp/fink.uDbGv #!/bin/sh -ev BIN_R=/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/bin/R mkdir -p /sw/build.build/root-cran-foreign-r30-0.8-61-1/sw/lib/R/3.0/site-library pushd /sw/build.build/cran-foreign-r30-0.8-61-1/foreign/.. && $BIN_R --verbose CMD install --library=/sw/build.build/root-cran-foreign-r30-0.8-61-1/sw/lib/R/3.0/site-library foreign /sw/build.build/cran-foreign-r30-0.8-61-1 /sw/build.build/cran-foreign-r30-0.8-61-1/foreign * installing *source* package 'foreign' ... ** package 'foreign' successfully unpacked and MD5 sums checked ** libs flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/include -DNDEBUG -I/sw/include -fPIC -g -O3 -c R_systat.c -o R_systat.o flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/include -DNDEBUG -I/sw/include -fPIC -g -O3 -c Rdbfread.c -o Rdbfread.o flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/include -DNDEBUG -I/sw/include -fPIC -g -O3 -c Rdbfwrite.c -o Rdbfwrite.o flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/include -DNDEBUG -I/sw/include -fPIC -g -O3 -c SASxport.c -o SASxport.o flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/include -DNDEBUG -I/sw/include -fPIC -g -O3 -c avl.c -o avl.o flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/include -DNDEBUG -I/sw/include -fPIC -g -O3 -c dbfopen.c -o dbfopen.o flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/include -DNDEBUG -I/sw/include -fPIC -g -O3 -c file-handle.c -o file-handle.o flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/include -DNDEBUG -I/sw/include -fPIC -g -O3 -c format.c -o format.o flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/include -DNDEBUG -I/sw/include -fPIC -g -O3 -c init.c -o init.o flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/include -DNDEBUG -I/sw/include -fPIC -g -O3 -c minitab.c -o minitab.o flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/include -DNDEBUG -I/sw/include -fPIC -g -O3 -c pfm-read.c -o pfm-read.o flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/include -DNDEBUG -I/sw/include -fPIC -g -O3 -c sfm-read.c -o sfm-read.o flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/include -DNDEBUG -I/sw/include -fPIC -g -O3 -c spss.c -o spss.o flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/include -DNDEBUG -I/sw/include -fPIC -g -O3 -c stataread.c -o stataread.o flag-sort -r gcc -ffor-scope -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/sw/lib -o foreign.dylib R_systat.o Rdbfread.o Rdbfwrite.o SASxport.o avl.o dbfopen.o file-handle.o format.o init.o minitab.o pfm-read.o sfm-read.o spss.o stataread.o -L/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/lib -lR -lintl -Wl,-framework -Wl,CoreFoundation installing to /sw/build.build/root-cran-foreign-r30-0.8-61-1/sw/lib/R/3.0/site-library/foreign/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (foreign) install_name_tool -id /sw/lib/R/3.0/site-library/foreign/libs/foreign.dylib /sw/build.build/root-cran-foreign-r30-0.8-61-1/sw/lib/R/3.0/site-library/foreign/libs/foreign.dylib sudo -u fink-bld [ENV] sh -c /tmp/fink.TZkM3 /bin/rm -f /sw/build.build/root-cran-foreign-r30-0.8-61-1/sw/info/dir /sw/build.build/root-cran-foreign-r30-0.8-61-1/sw/info/dir.old /sw/build.build/root-cran-foreign-r30-0.8-61-1/sw/share/info/dir /sw/build.build/root-cran-foreign-r30-0.8-61-1/sw/share/info/dir.old Reverting ownership of install dir to root Writing control file... Creating shlibs files... Writing md5sums file... env LANG=C LC_ALL=C dpkg-deb -b root-cran-foreign-r30-0.8-61-1 /sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods dpkg-deb: building package `cran-foreign-r30' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods/cran-foreign-r30_0.8-61-1_darwin-x86_64.deb'. Removing runtime build-lock... Removing build-lock package... /sw/bin/dpkg-lockwait -r fink-buildlock-cran-foreign-r30-0.8-61-1 (Reading database ... 9488 files and directories currently installed.) Removing fink-buildlock-cran-foreign-r30-0.8-61-1 ...