printf '

' | fink --no-use-binary-dist --yes  --build-as-nobody rebuild cran-gcexplorer-r31 2>&1
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run 'fink selfupdate' to get the latest package descriptions.
The package 'cran-gcexplorer-r31' will be built without being installed.
Reading build dependency for cran-gcexplorer-r31-0.9-4-1...
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The package 'cran-modeltools-r31' will be installed.
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The following package will be rebuilt:
 cran-gcexplorer-r31
The following 55 additional packages will be installed:
 atk1-shlibs bioconductor-biobase-r31 bioconductor-biocgenerics-r31
 bioconductor-graph-r31 bioconductor-rgraphviz-r31 cairo-shlibs
 cran-flexclust-r31 cran-lattice-r31 cran-modeltools-r31 expat1-shlibs
 flag-sort fontconfig-config fontconfig2-shlibs freeglut-shlibs
 freetype219-shlibs gcc49-shlibs gd2-shlibs giflib-shlibs glib2-shlibs
 glitz-shlibs graphviz-shlibs gtk+2-shlibs gtkglext1-shlibs gts75-shlibs
 guile18-shlibs libcroco3-shlibs libdatrie1-shlibs libgsf1.114-shlibs
 libicu48-shlibs libjasper.1-shlibs libjbig-shlibs libjpeg9-shlibs
 liblzma5-shlibs libming1-shlibs libpcre1-shlibs libpng16-shlibs
 librsvg2-shlibs libthai libthai-shlibs libtiff5-shlibs libtool2-shlibs
 libxml2-shlibs lua51-shlibs pango1-xft2-ft219-shlibs pixman-shlibs pkgconfig
 r-base31 r-base31-dev r-base31-shlibs readline6-shlibs shared-mime-info
 tcltk tcltk-shlibs xdg-base xft2-shlibs
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Setting runtime build-lock...
dpkg-deb -b /sw/build.build/root-fink-buildlock-cran-gcexplorer-r31-0.9-4-1 /sw/build.build
dpkg-deb: building package `fink-buildlock-cran-gcexplorer-r31-0.9-4-1' in `/sw/build.build/fink-buildlock-cran-gcexplorer-r31-0.9-4-1_2014.08.16-08.49.13_darwin-x86_64.deb'.
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sudo -u fink-bld [ENV] sh -c /tmp/fink.4OG7u
env LANG=C LC_ALL=C /sw/bin/tar  --no-same-owner --no-same-permissions -xvf /sw/src/gcExplorer_0.9-4.tar.gz
gcExplorer/
gcExplorer/NEWS
gcExplorer/R/
gcExplorer/R/comp_test.R
gcExplorer/R/legend.size.R
gcExplorer/R/jkdist.R
gcExplorer/R/clnorm.R
gcExplorer/R/gcTable.R
gcExplorer/R/symbolplot.R
gcExplorer/R/gcOffline.R
gcExplorer/R/write.htmltable.R
gcExplorer/R/calcHCL.R
gcExplorer/R/clusterPlot.R
gcExplorer/R/edgeTest.R
gcExplorer/R/pattern.R
gcExplorer/R/gcProfile.R
gcExplorer/R/AAA-classes.R
gcExplorer/R/Group2Cluster.R
gcExplorer/R/gridnodes.R
gcExplorer/R/gcExplorer.R
gcExplorer/R/node.tight.R
gcExplorer/R/go.details.R
gcExplorer/R/gcModify.R
gcExplorer/man/
gcExplorer/man/fitsod.Rd
gcExplorer/man/node.tight.Rd
gcExplorer/man/sigma.Rd
gcExplorer/man/oxygen.Rd
gcExplorer/man/edgeTest.Rd
gcExplorer/man/jkdist.Rd
gcExplorer/man/go.details.Rd
gcExplorer/man/clnorm.Rd
gcExplorer/man/gcExplorer.Rd
gcExplorer/man/symbolplot.Rd
gcExplorer/man/Group2Cluster.Rd
gcExplorer/man/write.htmltable.Rd
gcExplorer/man/clusterPlot.Rd
gcExplorer/man/gcModify.Rd
gcExplorer/man/comp_test.Rd
gcExplorer/man/gcOffline.Rd
gcExplorer/man/gcTable.Rd
gcExplorer/man/gcProfile.Rd
gcExplorer/man/gridnodes.Rd
gcExplorer/man/ps19.Rd
gcExplorer/man/pattern.Rd
gcExplorer/inst/
gcExplorer/inst/CITATION
gcExplorer/data/
gcExplorer/data/hsod.rda
gcExplorer/data/oxygen.rda
gcExplorer/data/sigma.rda
gcExplorer/data/datalist
gcExplorer/data/ps19.rda
gcExplorer/data/fitsod.rda
gcExplorer/data/comp19.rda
gcExplorer/data/gobp.rda
gcExplorer/COPYING
gcExplorer/NAMESPACE
gcExplorer/README
gcExplorer/COPYRIGHTS
gcExplorer/DESCRIPTION
sudo -u fink-bld [ENV] sh -c /tmp/fink.T4XT4
/tmp/fink.dX7z2
#!/bin/bash -ev
  export TMPDIR=/sw/build.build/cran-gcexplorer-r31-0.9-4-1/gcExplorer/tmp
  BIN_R=/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/bin/R
  
  pushd ..
/sw/build.build/cran-gcexplorer-r31-0.9-4-1 /sw/build.build/cran-gcexplorer-r31-0.9-4-1/gcExplorer
  if [[ 3.1 > 2.15 ]]; then
    $BIN_R --verbose CMD build --no-build-vignettes gcExplorer
  else
    $BIN_R --verbose CMD build --no-vignettes gcExplorer
  fi
* checking for file 'gcExplorer/DESCRIPTION' ... OK
* preparing 'gcExplorer':
* checking DESCRIPTION meta-information ... OK
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* looking to see if a 'data/datalist' file should be added
* building 'gcExplorer_0.9-4.tar.gz'

/bin/rm -rf /sw/build.build/root-cran-gcexplorer-r31-0.9-4-1
/bin/mkdir -p /sw/build.build/root-cran-gcexplorer-r31-0.9-4-1/sw
/bin/mkdir -p /sw/build.build/root-cran-gcexplorer-r31-0.9-4-1/DEBIAN
/usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-cran-gcexplorer-r31-0.9-4-1
sudo -u fink-bld [ENV] sh -c /tmp/fink.vsF1V
/tmp/fink.29Nk5
#!/bin/sh -ev
  BIN_R=/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/bin/R
  
  mkdir -p /sw/build.build/root-cran-gcexplorer-r31-0.9-4-1/sw/lib/R/3.1/site-library
  pushd /sw/build.build/cran-gcexplorer-r31-0.9-4-1/gcExplorer/.. && $BIN_R --verbose CMD install --library=/sw/build.build/root-cran-gcexplorer-r31-0.9-4-1/sw/lib/R/3.1/site-library gcExplorer
/sw/build.build/cran-gcexplorer-r31-0.9-4-1 /sw/build.build/cran-gcexplorer-r31-0.9-4-1/gcExplorer
* installing *source* package 'gcExplorer' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (gcExplorer)
sudo -u fink-bld [ENV] sh -c /tmp/fink.IB_8g
/bin/rm -f /sw/build.build/root-cran-gcexplorer-r31-0.9-4-1/sw/info/dir /sw/build.build/root-cran-gcexplorer-r31-0.9-4-1/sw/info/dir.old /sw/build.build/root-cran-gcexplorer-r31-0.9-4-1/sw/share/info/dir /sw/build.build/root-cran-gcexplorer-r31-0.9-4-1/sw/share/info/dir.old
Reverting ownership of install dir to root
Writing control file...
Writing md5sums file...
env LANG=C LC_ALL=C dpkg-deb -b root-cran-gcexplorer-r31-0.9-4-1 /sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods
dpkg-deb: building package `cran-gcexplorer-r31' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods/cran-gcexplorer-r31_0.9-4-1_darwin-x86_64.deb'.
Removing runtime build-lock...
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/sw/bin/dpkg-lockwait -r fink-buildlock-cran-gcexplorer-r31-0.9-4-1
(Reading database ... 9320 files and directories currently installed.)
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