printf ' ' | fink --no-use-binary-dist --yes --build-as-nobody rebuild cran-knitr-r30 2>&1 The package 'cran-knitr-r30' will be built without being installed. Reading build dependency for cran-knitr-r30-1.5-1... Reading dependency for cran-knitr-r30-1.5-1... Reading build conflict for cran-knitr-r30-1.5-1... The package 'r-base30-dev' will be installed. Reading dependency for r-base30-dev-3.0.3-8... Reading runtime dependency for r-base30-dev-3.0.3-8... The package 'r-base30' will be installed. Reading dependency for r-base30-3.0.3-8... Reading runtime dependency for r-base30-3.0.3-8... The package 'cran-evaluate-r30' will be installed. Reading dependency for cran-evaluate-r30-0.5.5-1... Reading runtime dependency for cran-evaluate-r30-0.5.5-1... The package 'cran-digest-r30' will be installed. Reading dependency for cran-digest-r30-0.6.4-2... Reading runtime dependency for cran-digest-r30-0.6.4-2... The package 'cran-formatr-r30' will be installed. Reading dependency for cran-formatr-r30-0.10-1... Reading runtime dependency for cran-formatr-r30-0.10-1... The package 'cran-highr-r30' will be installed. Reading dependency for cran-highr-r30-0.3-1... Reading runtime dependency for cran-highr-r30-0.3-1... The package 'cran-markdown-r30' will be installed. Reading dependency for cran-markdown-r30-0.6.5-2... Reading runtime dependency for cran-markdown-r30-0.6.5-2... The package 'cran-stringr-r30' will be installed. Reading dependency for cran-stringr-r30-0.6.2-1... Reading runtime dependency for cran-stringr-r30-0.6.2-1... The package 'r-base30-shlibs' will be installed. Reading dependency for r-base30-shlibs-3.0.3-8... Reading runtime dependency for r-base30-shlibs-3.0.3-8... The package 'flag-sort' will be installed. Reading dependency for flag-sort-0.5-1... Reading runtime dependency for flag-sort-0.5-1... The package 'cairo-shlibs' will be installed. Reading dependency for cairo-shlibs-1.12.14-1... Reading runtime dependency for cairo-shlibs-1.12.14-1... The package 'gcc49-shlibs' will be installed. Reading dependency for gcc49-shlibs-4.9.1-1000... Reading runtime dependency for gcc49-shlibs-4.9.1-1000... The package 'glib2-shlibs' will be installed. Reading dependency for glib2-shlibs-2.22.4-8... Reading runtime dependency for glib2-shlibs-2.22.4-8... The package 'libicu48-shlibs' will be installed. Reading dependency for libicu48-shlibs-4.8.1.1-2... Reading runtime dependency for libicu48-shlibs-4.8.1.1-2... The package 'libjpeg9-shlibs' will be installed. Reading dependency for libjpeg9-shlibs-9a-1... Reading runtime dependency for libjpeg9-shlibs-9a-1... The package 'liblzma5-shlibs' will be installed. Reading dependency for liblzma5-shlibs-5.0.5-2... Reading runtime dependency for liblzma5-shlibs-5.0.5-2... The package 'libpng16-shlibs' will be installed. Reading dependency for libpng16-shlibs-1.6.12-1... Reading runtime dependency for libpng16-shlibs-1.6.12-1... The package 'libtiff5-shlibs' will be installed. Reading dependency for libtiff5-shlibs-4.0.3-5... Reading runtime dependency for libtiff5-shlibs-4.0.3-5... The package 'pango1-xft2-ft219-shlibs' will be installed. Reading dependency for pango1-xft2-ft219-shlibs-1.24.5-9... Reading runtime dependency for pango1-xft2-ft219-shlibs-1.24.5-9... The package 'libpcre1-shlibs' will be installed. Reading dependency for libpcre1-shlibs-8.35-1... Reading runtime dependency for libpcre1-shlibs-8.35-1... The package 'readline6-shlibs' will be installed. Reading dependency for readline6-shlibs-6.3.6-1... Reading runtime dependency for readline6-shlibs-6.3.6-1... The package 'tcltk' will be installed. Reading dependency for tcltk-8.6.1-104... Reading runtime dependency for tcltk-8.6.1-104... The package 'fontconfig2-shlibs' will be installed. Reading dependency for fontconfig2-shlibs-2.10.2-1... Reading runtime dependency for fontconfig2-shlibs-2.10.2-1... The package 'freetype219-shlibs' will be installed. Reading dependency for freetype219-shlibs-2.4.12-1... Reading runtime dependency for freetype219-shlibs-2.4.12-1... The package 'pixman-shlibs' will be installed. Reading dependency for pixman-shlibs-0.32.4-1... Reading runtime dependency for pixman-shlibs-0.32.4-1... The package 'xdg-base' will be installed. Reading dependency for xdg-base-0.8-2... Reading runtime dependency for xdg-base-0.8-2... The package 'libjbig-shlibs' will be installed. Reading dependency for libjbig-shlibs-2.0-1... Reading runtime dependency for libjbig-shlibs-2.0-1... The package 'libthai-shlibs' will be installed. Reading dependency for libthai-shlibs-0.1.20-1... Reading runtime dependency for libthai-shlibs-0.1.20-1... The package 'xft2-shlibs' will be installed. Reading dependency for xft2-shlibs-2.2.0-3... Reading runtime dependency for xft2-shlibs-2.2.0-3... The package 'tcltk-shlibs' will be installed. Reading dependency for tcltk-shlibs-8.6.1-104... Reading runtime dependency for tcltk-shlibs-8.6.1-104... The package 'fontconfig-config' will be installed. Reading dependency for fontconfig-config-2.10.2-1... Reading runtime dependency for fontconfig-config-2.10.2-1... The package 'expat1-shlibs' will be installed. Reading dependency for expat1-shlibs-2.1.0-1... Reading runtime dependency for expat1-shlibs-2.1.0-1... The package 'libdatrie1-shlibs' will be installed. Reading dependency for libdatrie1-shlibs-0.2.8-2... Reading runtime dependency for libdatrie1-shlibs-0.2.8-2... The package 'libthai' will be installed. Reading dependency for libthai-0.1.20-1... Reading runtime dependency for libthai-0.1.20-1... The following package will be rebuilt: cran-knitr-r30 The following 34 additional packages will be installed: cairo-shlibs cran-digest-r30 cran-evaluate-r30 cran-formatr-r30 cran-highr-r30 cran-markdown-r30 cran-stringr-r30 expat1-shlibs flag-sort fontconfig-config fontconfig2-shlibs freetype219-shlibs gcc49-shlibs glib2-shlibs libdatrie1-shlibs libicu48-shlibs libjbig-shlibs libjpeg9-shlibs liblzma5-shlibs libpcre1-shlibs libpng16-shlibs libthai libthai-shlibs libtiff5-shlibs pango1-xft2-ft219-shlibs pixman-shlibs r-base30 r-base30-dev r-base30-shlibs readline6-shlibs tcltk tcltk-shlibs xdg-base xft2-shlibs Do you want to continue? [Y/n] (assuming default) Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/base/expat1-shlibs_2.1.0-1_darwin-x86_64.deb Selecting previously deselected package expat1-shlibs. (Reading database ... 4740 files and directories currently installed.) Unpacking expat1-shlibs (from .../expat1-shlibs_2.1.0-1_darwin-x86_64.deb) ... Setting up expat1-shlibs (2.1.0-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/flag-sort_0.5-1_darwin-x86_64.deb Selecting previously deselected package flag-sort. (Reading database ... 4745 files and directories currently installed.) Unpacking flag-sort (from .../flag-sort_0.5-1_darwin-x86_64.deb) ... Setting up flag-sort (0.5-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/freetype219-shlibs_2.4.12-1_darwin-x86_64.deb Selecting previously deselected package freetype219-shlibs. (Reading database ... 4746 files and directories currently installed.) Unpacking freetype219-shlibs (from .../freetype219-shlibs_2.4.12-1_darwin-x86_64.deb) ... Setting up freetype219-shlibs (2.4.12-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/gcc49-shlibs_4.9.1-1000_darwin-x86_64.deb Selecting previously deselected package gcc49-shlibs. (Reading database ... 4757 files and directories currently installed.) Unpacking gcc49-shlibs (from .../gcc49-shlibs_4.9.1-1000_darwin-x86_64.deb) ... Setting up gcc49-shlibs (4.9.1-1000) ... Clearing dependency_libs of .la files being installed Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libdatrie1-shlibs_0.2.8-2_darwin-x86_64.deb Selecting previously deselected package libdatrie1-shlibs. (Reading database ... 4802 files and directories currently installed.) Unpacking libdatrie1-shlibs (from .../libdatrie1-shlibs_0.2.8-2_darwin-x86_64.deb) ... Setting up libdatrie1-shlibs (0.2.8-2) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libicu48-shlibs_4.8.1.1-2_darwin-x86_64.deb Selecting previously deselected package libicu48-shlibs. (Reading database ... 4809 files and directories currently installed.) Unpacking libicu48-shlibs (from .../libicu48-shlibs_4.8.1.1-2_darwin-x86_64.deb) ... Setting up libicu48-shlibs (4.8.1.1-2) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/libjbig-shlibs_2.0-1_darwin-x86_64.deb Selecting previously deselected package libjbig-shlibs. (Reading database ... 4823 files and directories currently installed.) Unpacking libjbig-shlibs (from .../libjbig-shlibs_2.0-1_darwin-x86_64.deb) ... Setting up libjbig-shlibs (2.0-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/libjpeg9-shlibs_9a-1_darwin-x86_64.deb Selecting previously deselected package libjpeg9-shlibs. (Reading database ... 4830 files and directories currently installed.) Unpacking libjpeg9-shlibs (from .../libjpeg9-shlibs_9a-1_darwin-x86_64.deb) ... Setting up libjpeg9-shlibs (9a-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/utils/liblzma5-shlibs_5.0.5-2_darwin-x86_64.deb Selecting previously deselected package liblzma5-shlibs. (Reading database ... 4833 files and directories currently installed.) Unpacking liblzma5-shlibs (from .../liblzma5-shlibs_5.0.5-2_darwin-x86_64.deb) ... Setting up liblzma5-shlibs (5.0.5-2) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libpcre1-shlibs_8.35-1_darwin-x86_64.deb Selecting previously deselected package libpcre1-shlibs. (Reading database ... 4844 files and directories currently installed.) Unpacking libpcre1-shlibs (from .../libpcre1-shlibs_8.35-1_darwin-x86_64.deb) ... Setting up libpcre1-shlibs (8.35-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/libpng16-shlibs_1.6.12-1_darwin-x86_64.deb Selecting previously deselected package libpng16-shlibs. (Reading database ... 4857 files and directories currently installed.) Unpacking libpng16-shlibs (from .../libpng16-shlibs_1.6.12-1_darwin-x86_64.deb) ... Setting up libpng16-shlibs (1.6.12-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libthai-shlibs_0.1.20-1_darwin-x86_64.deb /sw/fink/debs/libthai_0.1.20-1_darwin-x86_64.deb Selecting previously deselected package libthai-shlibs. (Reading database ... 4865 files and directories currently installed.) Unpacking libthai-shlibs (from .../libthai-shlibs_0.1.20-1_darwin-x86_64.deb) ... Selecting previously deselected package libthai. Unpacking libthai (from .../libthai_0.1.20-1_darwin-x86_64.deb) ... Setting up libthai (0.1.20-1) ... Setting up libthai-shlibs (0.1.20-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/libtiff5-shlibs_4.0.3-5_darwin-x86_64.deb Selecting previously deselected package libtiff5-shlibs. (Reading database ... 4880 files and directories currently installed.) Unpacking libtiff5-shlibs (from .../libtiff5-shlibs_4.0.3-5_darwin-x86_64.deb) ... Setting up libtiff5-shlibs (4.0.3-5) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/pixman-shlibs_0.32.4-1_darwin-x86_64.deb Selecting previously deselected package pixman-shlibs. (Reading database ... 4885 files and directories currently installed.) Unpacking pixman-shlibs (from .../pixman-shlibs_0.32.4-1_darwin-x86_64.deb) ... Setting up pixman-shlibs (0.32.4-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/readline6-shlibs_6.3.6-1_darwin-x86_64.deb Selecting previously deselected package readline6-shlibs. (Reading database ... 4889 files and directories currently installed.) Unpacking readline6-shlibs (from .../readline6-shlibs_6.3.6-1_darwin-x86_64.deb) ... Setting up readline6-shlibs (6.3.6-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/xdg-base_0.8-2_darwin-x86_64.deb Selecting previously deselected package xdg-base. (Reading database ... 4900 files and directories currently installed.) Unpacking xdg-base (from .../xdg-base_0.8-2_darwin-x86_64.deb) ... Setting up xdg-base (0.8-2) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/x11/fontconfig2-shlibs_2.10.2-1_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/x11/fontconfig-config_2.10.2-1_darwin-x86_64.deb Selecting previously deselected package fontconfig2-shlibs. (Reading database ... 4902 files and directories currently installed.) Unpacking fontconfig2-shlibs (from .../fontconfig2-shlibs_2.10.2-1_darwin-x86_64.deb) ... Selecting previously deselected package fontconfig-config. Unpacking fontconfig-config (from .../fontconfig-config_2.10.2-1_darwin-x86_64.deb) ... Setting up fontconfig-config (2.10.2-1) ... Setting up fontconfig2-shlibs (2.10.2-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/glib2-shlibs_2.22.4-8_darwin-x86_64.deb Selecting previously deselected package glib2-shlibs. (Reading database ... 4987 files and directories currently installed.) Unpacking glib2-shlibs (from .../glib2-shlibs_2.22.4-8_darwin-x86_64.deb) ... Setting up glib2-shlibs (2.22.4-8) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/x11/xft2-shlibs_2.2.0-3_darwin-x86_64.deb Selecting previously deselected package xft2-shlibs. (Reading database ... 5214 files and directories currently installed.) Unpacking xft2-shlibs (from .../xft2-shlibs_2.2.0-3_darwin-x86_64.deb) ... Setting up xft2-shlibs (2.2.0-3) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/cairo-shlibs_1.12.14-1_darwin-x86_64.deb Selecting previously deselected package cairo-shlibs. (Reading database ... 5223 files and directories currently installed.) Unpacking cairo-shlibs (from .../cairo-shlibs_1.12.14-1_darwin-x86_64.deb) ... Setting up cairo-shlibs (1.12.14-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/gnome/pango1-xft2-ft219-shlibs_1.24.5-9_darwin-x86_64.deb Selecting previously deselected package pango1-xft2-ft219-shlibs. (Reading database ... 5242 files and directories currently installed.) Unpacking pango1-xft2-ft219-shlibs (from .../pango1-xft2-ft219-shlibs_1.24.5-9_darwin-x86_64.deb) ... Setting up pango1-xft2-ft219-shlibs (1.24.5-9) ... Clearing dependency_libs of .la files being installed Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/tcltk_8.6.1-104_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/tcltk-shlibs_8.6.1-104_darwin-x86_64.deb Selecting previously deselected package tcltk. (Reading database ... 5286 files and directories currently installed.) Unpacking tcltk (from .../tcltk_8.6.1-104_darwin-x86_64.deb) ... Selecting previously deselected package tcltk-shlibs. Unpacking tcltk-shlibs (from .../tcltk-shlibs_8.6.1-104_darwin-x86_64.deb) ... Setting up tcltk-shlibs (8.6.1-104) ... Setting up tcltk (8.6.1-104) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/r-base30_3.0.3-8_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base30-shlibs_3.0.3-8_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base30-dev_3.0.3-8_darwin-x86_64.deb Selecting previously deselected package r-base30. (Reading database ... 5762 files and directories currently installed.) Unpacking r-base30 (from .../r-base30_3.0.3-8_darwin-x86_64.deb) ... Selecting previously deselected package r-base30-shlibs. Unpacking r-base30-shlibs (from .../r-base30-shlibs_3.0.3-8_darwin-x86_64.deb) ... Selecting previously deselected package r-base30-dev. Unpacking r-base30-dev (from .../r-base30-dev_3.0.3-8_darwin-x86_64.deb) ... Setting up r-base30-shlibs (3.0.3-8) ... Setting up r-base30-dev (3.0.3-8) ... Setting up r-base30 (3.0.3-8) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/cran-digest-r30_0.6.4-2_darwin-x86_64.deb Selecting previously deselected package cran-digest-r30. (Reading database ... 7742 files and directories currently installed.) Unpacking cran-digest-r30 (from .../cran-digest-r30_0.6.4-2_darwin-x86_64.deb) ... Setting up cran-digest-r30 (0.6.4-2) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/cran-formatr-r30_0.10-1_darwin-x86_64.deb Selecting previously deselected package cran-formatr-r30. (Reading database ... 7771 files and directories currently installed.) Unpacking cran-formatr-r30 (from .../cran-formatr-r30_0.10-1_darwin-x86_64.deb) ... Setting up cran-formatr-r30 (0.10-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/cran-highr-r30_0.3-1_darwin-x86_64.deb Selecting previously deselected package cran-highr-r30. (Reading database ... 7803 files and directories currently installed.) Unpacking cran-highr-r30 (from .../cran-highr-r30_0.3-1_darwin-x86_64.deb) ... Setting up cran-highr-r30 (0.3-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/cran-markdown-r30_0.6.5-2_darwin-x86_64.deb Selecting previously deselected package cran-markdown-r30. (Reading database ... 7836 files and directories currently installed.) Unpacking cran-markdown-r30 (from .../cran-markdown-r30_0.6.5-2_darwin-x86_64.deb) ... Setting up cran-markdown-r30 (0.6.5-2) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/cran-stringr-r30_0.6.2-1_darwin-x86_64.deb Selecting previously deselected package cran-stringr-r30. (Reading database ... 7887 files and directories currently installed.) Unpacking cran-stringr-r30 (from .../cran-stringr-r30_0.6.2-1_darwin-x86_64.deb) ... Setting up cran-stringr-r30 (0.6.2-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/cran-evaluate-r30_0.5.5-1_darwin-x86_64.deb Selecting previously deselected package cran-evaluate-r30. (Reading database ... 7925 files and directories currently installed.) Unpacking cran-evaluate-r30 (from .../cran-evaluate-r30_0.5.5-1_darwin-x86_64.deb) ... Setting up cran-evaluate-r30 (0.5.5-1) ... Setting runtime build-lock... dpkg-deb -b /sw/build.build/root-fink-buildlock-cran-knitr-r30-1.5-1 /sw/build.build dpkg-deb: building package `fink-buildlock-cran-knitr-r30-1.5-1' in `/sw/build.build/fink-buildlock-cran-knitr-r30-1.5-1_2014.08.04-22.55.37_darwin-x86_64.deb'. Installing build-lock package... /sw/bin/dpkg-lockwait -i /sw/build.build/fink-buildlock-cran-knitr-r30-1.5-1_2014.08.04-22.55.37_darwin-x86_64.deb Selecting previously deselected package fink-buildlock-cran-knitr-r30-1.5-1. (Reading database ... 7949 files and directories currently installed.) Unpacking fink-buildlock-cran-knitr-r30-1.5-1 (from .../fink-buildlock-cran-knitr-r30-1.5-1_2014.08.04-22.55.37_darwin-x86_64.deb) ... Setting up fink-buildlock-cran-knitr-r30-1.5-1 (2014.08.04-22.55.37) ... sudo -u fink-bld [ENV] sh -c /tmp/fink._L8FJ env LANG=C LC_ALL=C /sw/bin/tar --no-same-owner --no-same-permissions -xvf /sw/src/knitr_1.5.tar.gz knitr/ knitr/inst/ knitr/inst/examples/ knitr/inst/examples/knitr-subfloats.Rnw knitr/inst/examples/knitr-manual.lyx knitr/inst/examples/knitr-spin.R knitr/inst/examples/knitr-packages.bib knitr/inst/examples/knitr-beamer.lyx knitr/inst/examples/knitr-input-child.Rnw knitr/inst/examples/knitr-twocolumn.Rnw knitr/inst/examples/knitr-latex.Rtex knitr/inst/examples/knitr-manual.bib knitr/inst/examples/knitr-minimal.Rrst knitr/inst/examples/knitr-graphics.lyx knitr/inst/examples/knitr-beamer.Rnw knitr/inst/examples/knitr-subfloats.lyx knitr/inst/examples/knit-all.R knitr/inst/examples/knitr-minimal.Rmd knitr/inst/examples/knitr-input.Rnw knitr/inst/examples/knitr-minimal.Rnw knitr/inst/examples/knitr-minimal.lyx knitr/inst/examples/knitr-graphics.Rnw knitr/inst/examples/knitr-twocolumn.lyx knitr/inst/examples/knitr-themes.Rnw knitr/inst/examples/knitr-listings.lyx knitr/inst/examples/child/ knitr/inst/examples/child/sub/ knitr/inst/examples/child/sub/knitr-child-c.Rnw knitr/inst/examples/child/knitr-main.Rnw knitr/inst/examples/child/knitr-child-a.Rnw knitr/inst/examples/child/knitr-main.Rmd knitr/inst/examples/child/knitr-child-b.Rnw knitr/inst/examples/child/knitr-child.Rmd knitr/inst/examples/child/knitr-parent.Rnw knitr/inst/examples/knitr-themes.lyx knitr/inst/examples/knitr-listings.Rnw knitr/inst/examples/knitr-spin.html knitr/inst/examples/knitr-manual.Rnw knitr/inst/examples/knitr-minimal.brew knitr/inst/examples/knitr-spin.Rmd knitr/inst/CITATION knitr/inst/misc/ knitr/inst/misc/R.css knitr/inst/misc/knitr-template.Rmd knitr/inst/misc/tikz2pdf.tex knitr/inst/misc/docco-template.html knitr/inst/misc/knitr.sty knitr/inst/misc/docco-classic.html knitr/inst/misc/knitr-template.Rnw knitr/inst/misc/datatables.txt knitr/inst/misc/docco-classic.css knitr/inst/misc/Sweavel.sty knitr/inst/misc/stitch-test.R knitr/inst/misc/gWidgetsWWW2-knitr.R knitr/inst/misc/knitr.css knitr/inst/misc/knitr-template.Rhtml knitr/inst/misc/vignette.css knitr/inst/misc/framed.sty knitr/inst/misc/toggleR.js knitr/inst/bin/ knitr/inst/bin/knit knitr/inst/shiny/ knitr/inst/shiny/ui.R knitr/inst/shiny/server.R knitr/inst/shiny/www/ knitr/inst/shiny/www/ace-shiny.css knitr/inst/shiny/www/ace-shiny.js knitr/inst/doc/ knitr/inst/doc/knitr-markdown.html knitr/inst/doc/datatables.Rmd knitr/inst/doc/knitr-html.Rhtml knitr/inst/doc/docco-linear.R knitr/inst/doc/docco-classic.html knitr/inst/doc/knit_expand.html knitr/inst/doc/docco-linear.html knitr/inst/doc/docco-classic.Rmd knitr/inst/doc/knitr-intro.Rnw knitr/inst/doc/knitr-markdown.R knitr/inst/doc/knitr-intro.pdf knitr/inst/doc/knitr-markdown.Rmd knitr/inst/doc/knitr-html.R knitr/inst/doc/knit_expand.Rmd knitr/inst/doc/docco-linear.Rmd knitr/inst/doc/knit_expand.R knitr/inst/doc/knitr-refcard.pdf knitr/inst/doc/datatables.R knitr/inst/doc/knitr-refcard.R knitr/inst/doc/docco-classic.R knitr/inst/doc/knitr-intro.R knitr/inst/doc/datatables.html knitr/inst/doc/knitr-refcard.Rnw knitr/inst/doc/knitr-html.html knitr/inst/opencpu/ knitr/inst/opencpu/apps/ knitr/inst/opencpu/apps/index.html knitr/inst/themes/ knitr/inst/themes/rdark.css knitr/inst/themes/edit-nedit.css knitr/inst/themes/edit-eclipse.css knitr/inst/themes/edit-matlab.css knitr/inst/themes/aiseered.css knitr/inst/themes/andes.css knitr/inst/themes/solarized-light.css knitr/inst/themes/edit-kwrite.css knitr/inst/themes/golden.css knitr/inst/themes/navy.css knitr/inst/themes/nightshimmer.css knitr/inst/themes/bclear.css knitr/inst/themes/zellner.css knitr/inst/themes/greenlcd.css knitr/inst/themes/matrix.css knitr/inst/themes/edit-xcode.css knitr/inst/themes/fine_blue.css knitr/inst/themes/breeze.css knitr/inst/themes/edit-gedit.css knitr/inst/themes/blacknblue.css knitr/inst/themes/darkness.css knitr/inst/themes/bright.css knitr/inst/themes/edit-emacs.css knitr/inst/themes/edit-jedit.css knitr/inst/themes/rootwater.css knitr/inst/themes/orion.css knitr/inst/themes/solarized-dark.css knitr/inst/themes/whitengrey.css knitr/inst/themes/maroloccio.css knitr/inst/themes/edit-vim.css knitr/inst/themes/seashell.css knitr/inst/themes/moria.css knitr/inst/themes/rand01.css knitr/inst/themes/edit-flashdevelop.css knitr/inst/themes/darkspectrum.css knitr/inst/themes/print.css knitr/inst/themes/darkbone.css knitr/inst/themes/candy.css knitr/inst/themes/tabula.css knitr/inst/themes/darkblue.css knitr/inst/themes/edit-vim-dark.css knitr/inst/themes/biogoo.css knitr/inst/themes/baycomb.css knitr/inst/themes/night.css knitr/inst/themes/earendel.css knitr/inst/themes/dusk.css knitr/inst/themes/autumn.css knitr/inst/themes/oxygenated.css knitr/inst/themes/acid.css knitr/inst/themes/lucretia.css knitr/inst/themes/ekvoli.css knitr/inst/themes/neon.css knitr/inst/themes/moe.css knitr/inst/themes/freya.css knitr/inst/themes/pablo.css knitr/inst/themes/navajo-night.css knitr/inst/themes/dante.css knitr/inst/themes/darkslategray.css knitr/inst/themes/bipolar.css knitr/inst/themes/tcsoft.css knitr/inst/themes/olive.css knitr/inst/themes/xoria256.css knitr/inst/themes/manxome.css knitr/inst/themes/fruit.css knitr/inst/themes/bluegreen.css knitr/inst/themes/clarity.css knitr/inst/themes/leo.css knitr/inst/themes/camo.css knitr/inst/themes/denim.css knitr/inst/themes/molokai.css knitr/inst/themes/edit-anjuta.css knitr/inst/themes/nuvola.css knitr/inst/themes/vampire.css knitr/inst/themes/zmrok.css knitr/inst/themes/peaksea.css knitr/inst/themes/default.css knitr/inst/themes/easter.css knitr/inst/themes/kellys.css knitr/inst/themes/zenburn.css knitr/inst/themes/relaxedgreen.css knitr/inst/themes/anotherdark.css knitr/inst/themes/edit-msvs2008.css knitr/tests/ knitr/tests/testit/ knitr/tests/testit/test-patterns.R knitr/tests/testit/test-templates.R knitr/tests/testit/test-utils.R knitr/tests/testit/test-closure.R knitr/tests/testit/test-output.R knitr/tests/testit/test-hooks.R knitr/tests/testit/test-cache.R knitr/tests/testit/test-envir.R knitr/tests/testit/test-plot.R knitr/tests/testit/knit-envir.Rmd knitr/tests/testit/test-parser.R knitr/tests/testit/test-table.R knitr/tests/run-all.R knitr/NAMESPACE knitr/demo/ knitr/demo/gwidgets.R knitr/demo/notebook.R knitr/demo/00Index knitr/NEWS knitr/R/ knitr/R/hooks-html.R knitr/R/defaults.R knitr/R/utils.R knitr/R/header.R knitr/R/hooks-extra.R knitr/R/output.R knitr/R/citation.R knitr/R/concordance.R knitr/R/plot.R knitr/R/themes-eclipse.R knitr/R/utils-conversion.R knitr/R/rocco.R knitr/R/block.R knitr/R/utils-upload.R knitr/R/themes.R knitr/R/hooks-md.R knitr/R/hooks.R knitr/R/utils-rd2html.R knitr/R/template.R knitr/R/spin.R knitr/R/hooks-rst.R knitr/R/utils-sweave.R knitr/R/cache.R knitr/R/pattern.R knitr/R/utils-vignettes.R knitr/R/hooks-asciidoc.R knitr/R/pandoc.R knitr/R/package.R knitr/R/table.R knitr/R/utils-base64.R knitr/R/highlight.R knitr/R/engine.R knitr/R/hooks-latex.R knitr/R/zzz.R knitr/R/parser.R knitr/R/hooks-chunk.R knitr/vignettes/ knitr/vignettes/datatables.Rmd knitr/vignettes/knitr-refcard.lyx knitr/vignettes/knitr-html.Rhtml knitr/vignettes/docco-classic.Rmd knitr/vignettes/knitr-intro.Rnw knitr/vignettes/knitr-markdown.Rmd knitr/vignettes/knitr-intro.lyx knitr/vignettes/knit_expand.Rmd knitr/vignettes/docco-linear.Rmd knitr/vignettes/knitr-refcard.Rnw knitr/README.md knitr/MD5 knitr/build/ knitr/build/vignette.rds knitr/DESCRIPTION knitr/man/ knitr/man/image_uri.Rd knitr/man/pat_fun.Rd knitr/man/imgur_upload.Rd knitr/man/knitr-package.Rd knitr/man/stitch.Rd knitr/man/rst2pdf.Rd knitr/man/knit2html.Rd knitr/man/all_patterns.Rd knitr/man/set_alias.Rd knitr/man/eclipse_theme.Rd knitr/man/chunk_hook.Rd knitr/man/knit_engines.Rd knitr/man/wrap_rmd.Rd knitr/man/rand_seed.Rd knitr/man/knit_theme.Rd knitr/man/rocco.Rd knitr/man/set_header.Rd knitr/man/knit2pdf.Rd knitr/man/hook_animation.Rd knitr/man/pandoc.Rd knitr/man/hook_plot.Rd knitr/man/Sweave2knitr.Rd knitr/man/hook_document.Rd knitr/man/knit_rd.Rd knitr/man/all_labels.Rd knitr/man/write_bib.Rd knitr/man/knit_hooks.Rd knitr/man/dep_auto.Rd knitr/man/knit.Rd knitr/man/fig_path.Rd knitr/man/read_rforge.Rd knitr/man/knit2wp.Rd knitr/man/set_parent.Rd knitr/man/knit_child.Rd knitr/man/read_chunk.Rd knitr/man/spin.Rd knitr/man/knit_exit.Rd knitr/man/opts_chunk.Rd knitr/man/opts_template.Rd knitr/man/kable.Rd knitr/man/output_hooks.Rd knitr/man/knit_patterns.Rd knitr/man/opts_knit.Rd knitr/man/knit_expand.Rd knitr/man/dep_prev.Rd knitr/man/knit_global.Rd knitr/.Rinstignore sudo -u fink-bld [ENV] sh -c /tmp/fink.9aWSS /tmp/fink.IOTms #!/bin/sh -ev export TMPDIR=/sw/build.build/cran-knitr-r30-1.5-1/knitr/tmp BIN_R=/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/bin/R pushd .. /sw/build.build/cran-knitr-r30-1.5-1 /sw/build.build/cran-knitr-r30-1.5-1/knitr if [[ 3.0 > 2.15 ]]; then $BIN_R --verbose CMD build --no-build-vignettes knitr else $BIN_R --verbose CMD build --no-vignettes knitr fi * checking for file 'knitr/DESCRIPTION' ... OK * preparing 'knitr': * checking DESCRIPTION meta-information ... OK * checking vignette meta-information ... OK * checking for LF line-endings in source and make files * checking for empty or unneeded directories * building 'knitr_1.5.tar.gz' /bin/rm -rf /sw/build.build/root-cran-knitr-r30-1.5-1 /bin/mkdir -p /sw/build.build/root-cran-knitr-r30-1.5-1/sw /bin/mkdir -p /sw/build.build/root-cran-knitr-r30-1.5-1/DEBIAN /usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-cran-knitr-r30-1.5-1 sudo -u fink-bld [ENV] sh -c /tmp/fink.kwyyu /tmp/fink.7BigE #!/bin/sh -ev BIN_R=/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/bin/R mkdir -p /sw/build.build/root-cran-knitr-r30-1.5-1/sw/lib/R/3.0/site-library pushd /sw/build.build/cran-knitr-r30-1.5-1/knitr/.. && $BIN_R --verbose CMD install --library=/sw/build.build/root-cran-knitr-r30-1.5-1/sw/lib/R/3.0/site-library knitr /sw/build.build/cran-knitr-r30-1.5-1 /sw/build.build/cran-knitr-r30-1.5-1/knitr * installing *source* package 'knitr' ... ** package 'knitr' successfully unpacked and MD5 sums checked ** R ** demo ** inst ** preparing package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (knitr) sudo -u fink-bld [ENV] sh -c /tmp/fink.YU8mG /bin/rm -f /sw/build.build/root-cran-knitr-r30-1.5-1/sw/info/dir /sw/build.build/root-cran-knitr-r30-1.5-1/sw/info/dir.old /sw/build.build/root-cran-knitr-r30-1.5-1/sw/share/info/dir /sw/build.build/root-cran-knitr-r30-1.5-1/sw/share/info/dir.old Reverting ownership of install dir to root Writing control file... Writing md5sums file... env LANG=C LC_ALL=C dpkg-deb -b root-cran-knitr-r30-1.5-1 /sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods dpkg-deb: building package `cran-knitr-r30' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods/cran-knitr-r30_1.5-1_darwin-x86_64.deb'. Removing runtime build-lock... Removing build-lock package... /sw/bin/dpkg-lockwait -r fink-buildlock-cran-knitr-r30-1.5-1 (Reading database ... 7950 files and directories currently installed.) Removing fink-buildlock-cran-knitr-r30-1.5-1 ...