printf ' ' | fink --no-use-binary-dist --yes --build-as-nobody rebuild cran-nloptr-r30 2>&1 The package 'cran-nloptr-r30' will be built without being installed. Reading build dependency for cran-nloptr-r30-1.0.0-1... Reading dependency for cran-nloptr-r30-1.0.0-1... Reading build conflict for cran-nloptr-r30-1.0.0-1... The package 'r-base30-dev' will be installed. Reading dependency for r-base30-dev-3.0.3-8... Reading runtime dependency for r-base30-dev-3.0.3-8... The package 'libgettext8-dev' will be installed. Reading dependency for libgettext8-dev-0.18.3.1-2... Reading runtime dependency for libgettext8-dev-0.18.3.1-2... The package 'r-base30' will be installed. Reading dependency for r-base30-3.0.3-8... Reading runtime dependency for r-base30-3.0.3-8... The package 'r-base30-shlibs' will be installed. Reading dependency for r-base30-shlibs-3.0.3-8... Reading runtime dependency for r-base30-shlibs-3.0.3-8... The package 'gettext-bin' will be installed. Reading dependency for gettext-bin-0.18.3.1-2... Reading runtime dependency for gettext-bin-0.18.3.1-2... The package 'flag-sort' will be installed. Reading dependency for flag-sort-0.5-1... Reading runtime dependency for flag-sort-0.5-1... The package 'cairo-shlibs' will be installed. Reading dependency for cairo-shlibs-1.12.14-1... Reading runtime dependency for cairo-shlibs-1.12.14-1... The package 'gcc49-shlibs' will be installed. Reading dependency for gcc49-shlibs-4.9.1-1000... Reading runtime dependency for gcc49-shlibs-4.9.1-1000... The package 'glib2-shlibs' will be installed. Reading dependency for glib2-shlibs-2.22.4-8... Reading runtime dependency for glib2-shlibs-2.22.4-8... The package 'libicu48-shlibs' will be installed. Reading dependency for libicu48-shlibs-4.8.1.1-2... Reading runtime dependency for libicu48-shlibs-4.8.1.1-2... The package 'libjpeg9-shlibs' will be installed. Reading dependency for libjpeg9-shlibs-9a-1... Reading runtime dependency for libjpeg9-shlibs-9a-1... The package 'liblzma5-shlibs' will be installed. Reading dependency for liblzma5-shlibs-5.0.5-2... Reading runtime dependency for liblzma5-shlibs-5.0.5-2... The package 'libpng16-shlibs' will be installed. Reading dependency for libpng16-shlibs-1.6.12-1... Reading runtime dependency for libpng16-shlibs-1.6.12-1... The package 'libtiff5-shlibs' will be installed. Reading dependency for libtiff5-shlibs-4.0.3-5... Reading runtime dependency for libtiff5-shlibs-4.0.3-5... The package 'pango1-xft2-ft219-shlibs' will be installed. Reading dependency for pango1-xft2-ft219-shlibs-1.24.5-9... Reading runtime dependency for pango1-xft2-ft219-shlibs-1.24.5-9... The package 'libpcre1-shlibs' will be installed. Reading dependency for libpcre1-shlibs-8.35-1... Reading runtime dependency for libpcre1-shlibs-8.35-1... The package 'readline6-shlibs' will be installed. Reading dependency for readline6-shlibs-6.3.6-1... Reading runtime dependency for readline6-shlibs-6.3.6-1... The package 'tcltk' will be installed. Reading dependency for tcltk-8.6.1-104... Reading runtime dependency for tcltk-8.6.1-104... The package 'fontconfig2-shlibs' will be installed. Reading dependency for fontconfig2-shlibs-2.10.2-1... Reading runtime dependency for fontconfig2-shlibs-2.10.2-1... The package 'freetype219-shlibs' will be installed. Reading dependency for freetype219-shlibs-2.4.12-1... Reading runtime dependency for freetype219-shlibs-2.4.12-1... The package 'pixman-shlibs' will be installed. Reading dependency for pixman-shlibs-0.32.4-1... Reading runtime dependency for pixman-shlibs-0.32.4-1... The package 'xdg-base' will be installed. Reading dependency for xdg-base-0.8-2... Reading runtime dependency for xdg-base-0.8-2... The package 'libjbig-shlibs' will be installed. Reading dependency for libjbig-shlibs-2.0-1... Reading runtime dependency for libjbig-shlibs-2.0-1... The package 'libthai-shlibs' will be installed. Reading dependency for libthai-shlibs-0.1.20-1... Reading runtime dependency for libthai-shlibs-0.1.20-1... The package 'xft2-shlibs' will be installed. Reading dependency for xft2-shlibs-2.2.0-3... Reading runtime dependency for xft2-shlibs-2.2.0-3... The package 'tcltk-shlibs' will be installed. Reading dependency for tcltk-shlibs-8.6.1-104... Reading runtime dependency for tcltk-shlibs-8.6.1-104... The package 'fontconfig-config' will be installed. Reading dependency for fontconfig-config-2.10.2-1... Reading runtime dependency for fontconfig-config-2.10.2-1... The package 'expat1-shlibs' will be installed. Reading dependency for expat1-shlibs-2.1.0-1... Reading runtime dependency for expat1-shlibs-2.1.0-1... The package 'libdatrie1-shlibs' will be installed. Reading dependency for libdatrie1-shlibs-0.2.8-2... Reading runtime dependency for libdatrie1-shlibs-0.2.8-2... The package 'libthai' will be installed. Reading dependency for libthai-0.1.20-1... Reading runtime dependency for libthai-0.1.20-1... The following package will be rebuilt: cran-nloptr-r30 The following 30 additional packages will be installed: cairo-shlibs expat1-shlibs flag-sort fontconfig-config fontconfig2-shlibs freetype219-shlibs gcc49-shlibs gettext-bin glib2-shlibs libdatrie1-shlibs libgettext8-dev libicu48-shlibs libjbig-shlibs libjpeg9-shlibs liblzma5-shlibs libpcre1-shlibs libpng16-shlibs libthai libthai-shlibs libtiff5-shlibs pango1-xft2-ft219-shlibs pixman-shlibs r-base30 r-base30-dev r-base30-shlibs readline6-shlibs tcltk tcltk-shlibs xdg-base xft2-shlibs Do you want to continue? [Y/n] (assuming default) Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/base/expat1-shlibs_2.1.0-1_darwin-x86_64.deb Selecting previously deselected package expat1-shlibs. (Reading database ... 4296 files and directories currently installed.) Unpacking expat1-shlibs (from .../expat1-shlibs_2.1.0-1_darwin-x86_64.deb) ... Setting up expat1-shlibs (2.1.0-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/flag-sort_0.5-1_darwin-x86_64.deb Selecting previously deselected package flag-sort. (Reading database ... 4301 files and directories currently installed.) Unpacking flag-sort (from .../flag-sort_0.5-1_darwin-x86_64.deb) ... Setting up flag-sort (0.5-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/freetype219-shlibs_2.4.12-1_darwin-x86_64.deb Selecting previously deselected package freetype219-shlibs. (Reading database ... 4302 files and directories currently installed.) Unpacking freetype219-shlibs (from .../freetype219-shlibs_2.4.12-1_darwin-x86_64.deb) ... Setting up freetype219-shlibs (2.4.12-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/gcc49-shlibs_4.9.1-1000_darwin-x86_64.deb Selecting previously deselected package gcc49-shlibs. (Reading database ... 4313 files and directories currently installed.) Unpacking gcc49-shlibs (from .../gcc49-shlibs_4.9.1-1000_darwin-x86_64.deb) ... Setting up gcc49-shlibs (4.9.1-1000) ... Clearing dependency_libs of .la files being installed Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libdatrie1-shlibs_0.2.8-2_darwin-x86_64.deb Selecting previously deselected package libdatrie1-shlibs. (Reading database ... 4358 files and directories currently installed.) Unpacking libdatrie1-shlibs (from .../libdatrie1-shlibs_0.2.8-2_darwin-x86_64.deb) ... Setting up libdatrie1-shlibs (0.2.8-2) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/base/libgettext8-dev_0.18.3.1-2_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/base/gettext-bin_0.18.3.1-2_darwin-x86_64.deb Selecting previously deselected package libgettext8-dev. (Reading database ... 4365 files and directories currently installed.) Unpacking libgettext8-dev (from .../libgettext8-dev_0.18.3.1-2_darwin-x86_64.deb) ... Selecting previously deselected package gettext-bin. Unpacking gettext-bin (from .../gettext-bin_0.18.3.1-2_darwin-x86_64.deb) ... Setting up gettext-bin (0.18.3.1-2) ... Setting up libgettext8-dev (0.18.3.1-2) ... Clearing dependency_libs of .la files being installed Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libicu48-shlibs_4.8.1.1-2_darwin-x86_64.deb Selecting previously deselected package libicu48-shlibs. 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Unpacking libjpeg9-shlibs (from .../libjpeg9-shlibs_9a-1_darwin-x86_64.deb) ... Setting up libjpeg9-shlibs (9a-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/utils/liblzma5-shlibs_5.0.5-2_darwin-x86_64.deb Selecting previously deselected package liblzma5-shlibs. (Reading database ... 4483 files and directories currently installed.) Unpacking liblzma5-shlibs (from .../liblzma5-shlibs_5.0.5-2_darwin-x86_64.deb) ... Setting up liblzma5-shlibs (5.0.5-2) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libpcre1-shlibs_8.35-1_darwin-x86_64.deb Selecting previously deselected package libpcre1-shlibs. (Reading database ... 4494 files and directories currently installed.) Unpacking libpcre1-shlibs (from .../libpcre1-shlibs_8.35-1_darwin-x86_64.deb) ... Setting up libpcre1-shlibs (8.35-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/libpng16-shlibs_1.6.12-1_darwin-x86_64.deb Selecting previously deselected package libpng16-shlibs. (Reading database ... 4507 files and directories currently installed.) Unpacking libpng16-shlibs (from .../libpng16-shlibs_1.6.12-1_darwin-x86_64.deb) ... Setting up libpng16-shlibs (1.6.12-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libthai-shlibs_0.1.20-1_darwin-x86_64.deb /sw/fink/debs/libthai_0.1.20-1_darwin-x86_64.deb Selecting previously deselected package libthai-shlibs. (Reading database ... 4515 files and directories currently installed.) Unpacking libthai-shlibs (from .../libthai-shlibs_0.1.20-1_darwin-x86_64.deb) ... Selecting previously deselected package libthai. Unpacking libthai (from .../libthai_0.1.20-1_darwin-x86_64.deb) ... Setting up libthai (0.1.20-1) ... Setting up libthai-shlibs (0.1.20-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/libtiff5-shlibs_4.0.3-5_darwin-x86_64.deb Selecting previously deselected package libtiff5-shlibs. (Reading database ... 4530 files and directories currently installed.) Unpacking libtiff5-shlibs (from .../libtiff5-shlibs_4.0.3-5_darwin-x86_64.deb) ... Setting up libtiff5-shlibs (4.0.3-5) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/pixman-shlibs_0.32.4-1_darwin-x86_64.deb Selecting previously deselected package pixman-shlibs. (Reading database ... 4535 files and directories currently installed.) Unpacking pixman-shlibs (from .../pixman-shlibs_0.32.4-1_darwin-x86_64.deb) ... Setting up pixman-shlibs (0.32.4-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/readline6-shlibs_6.3.6-1_darwin-x86_64.deb Selecting previously deselected package readline6-shlibs. (Reading database ... 4539 files and directories currently installed.) Unpacking readline6-shlibs (from .../readline6-shlibs_6.3.6-1_darwin-x86_64.deb) ... Setting up readline6-shlibs (6.3.6-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/xdg-base_0.8-2_darwin-x86_64.deb Selecting previously deselected package xdg-base. (Reading database ... 4550 files and directories currently installed.) Unpacking xdg-base (from .../xdg-base_0.8-2_darwin-x86_64.deb) ... Setting up xdg-base (0.8-2) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/x11/fontconfig2-shlibs_2.10.2-1_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/x11/fontconfig-config_2.10.2-1_darwin-x86_64.deb Selecting previously deselected package fontconfig2-shlibs. (Reading database ... 4552 files and directories currently installed.) Unpacking fontconfig2-shlibs (from .../fontconfig2-shlibs_2.10.2-1_darwin-x86_64.deb) ... Selecting previously deselected package fontconfig-config. Unpacking fontconfig-config (from .../fontconfig-config_2.10.2-1_darwin-x86_64.deb) ... Setting up fontconfig-config (2.10.2-1) ... Setting up fontconfig2-shlibs (2.10.2-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/glib2-shlibs_2.22.4-8_darwin-x86_64.deb Selecting previously deselected package glib2-shlibs. (Reading database ... 4637 files and directories currently installed.) Unpacking glib2-shlibs (from .../glib2-shlibs_2.22.4-8_darwin-x86_64.deb) ... Setting up glib2-shlibs (2.22.4-8) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/x11/xft2-shlibs_2.2.0-3_darwin-x86_64.deb Selecting previously deselected package xft2-shlibs. (Reading database ... 4856 files and directories currently installed.) Unpacking xft2-shlibs (from .../xft2-shlibs_2.2.0-3_darwin-x86_64.deb) ... Setting up xft2-shlibs (2.2.0-3) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/cairo-shlibs_1.12.14-1_darwin-x86_64.deb Selecting previously deselected package cairo-shlibs. (Reading database ... 4865 files and directories currently installed.) Unpacking cairo-shlibs (from .../cairo-shlibs_1.12.14-1_darwin-x86_64.deb) ... Setting up cairo-shlibs (1.12.14-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/gnome/pango1-xft2-ft219-shlibs_1.24.5-9_darwin-x86_64.deb Selecting previously deselected package pango1-xft2-ft219-shlibs. (Reading database ... 4884 files and directories currently installed.) Unpacking pango1-xft2-ft219-shlibs (from .../pango1-xft2-ft219-shlibs_1.24.5-9_darwin-x86_64.deb) ... Setting up pango1-xft2-ft219-shlibs (1.24.5-9) ... Clearing dependency_libs of .la files being installed Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/tcltk_8.6.1-104_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/tcltk-shlibs_8.6.1-104_darwin-x86_64.deb Selecting previously deselected package tcltk. (Reading database ... 4928 files and directories currently installed.) Unpacking tcltk (from .../tcltk_8.6.1-104_darwin-x86_64.deb) ... Selecting previously deselected package tcltk-shlibs. Unpacking tcltk-shlibs (from .../tcltk-shlibs_8.6.1-104_darwin-x86_64.deb) ... Setting up tcltk-shlibs (8.6.1-104) ... Setting up tcltk (8.6.1-104) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/r-base30_3.0.3-8_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base30-shlibs_3.0.3-8_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base30-dev_3.0.3-8_darwin-x86_64.deb Selecting previously deselected package r-base30. (Reading database ... 5404 files and directories currently installed.) Unpacking r-base30 (from .../r-base30_3.0.3-8_darwin-x86_64.deb) ... Selecting previously deselected package r-base30-shlibs. Unpacking r-base30-shlibs (from .../r-base30-shlibs_3.0.3-8_darwin-x86_64.deb) ... Selecting previously deselected package r-base30-dev. Unpacking r-base30-dev (from .../r-base30-dev_3.0.3-8_darwin-x86_64.deb) ... Setting up r-base30-shlibs (3.0.3-8) ... Setting up r-base30-dev (3.0.3-8) ... Setting up r-base30 (3.0.3-8) ... Setting runtime build-lock... dpkg-deb -b /sw/build.build/root-fink-buildlock-cran-nloptr-r30-1.0.0-1 /sw/build.build dpkg-deb: building package `fink-buildlock-cran-nloptr-r30-1.0.0-1' in `/sw/build.build/fink-buildlock-cran-nloptr-r30-1.0.0-1_2014.07.27-09.48.20_darwin-x86_64.deb'. Installing build-lock package... /sw/bin/dpkg-lockwait -i /sw/build.build/fink-buildlock-cran-nloptr-r30-1.0.0-1_2014.07.27-09.48.20_darwin-x86_64.deb Selecting previously deselected package fink-buildlock-cran-nloptr-r30-1.0.0-1. (Reading database ... 7384 files and directories currently installed.) Unpacking fink-buildlock-cran-nloptr-r30-1.0.0-1 (from .../fink-buildlock-cran-nloptr-r30-1.0.0-1_2014.07.27-09.48.20_darwin-x86_64.deb) ... Setting up fink-buildlock-cran-nloptr-r30-1.0.0-1 (2014.07.27-09.48.20) ... sudo -u fink-bld [ENV] sh -c /tmp/fink.i9eYo env LANG=C LC_ALL=C /sw/bin/tar --no-same-owner --no-same-permissions -xvf /sw/src/nloptr_1.0.0.tar.gz nloptr/ nloptr/inst/ nloptr/inst/CITATION nloptr/inst/doc/ nloptr/inst/doc/nloptr.R nloptr/inst/doc/nloptr.pdf nloptr/inst/doc/nloptr.Rnw nloptr/tests/ nloptr/tests/testthat/ nloptr/tests/testthat/hs023.R nloptr/tests/testthat/test-banana-global.R nloptr/tests/testthat/simple.R nloptr/tests/testthat/example.R nloptr/tests/testthat/options.R nloptr/tests/testthat/test-banana.R nloptr/tests/testthat/hs071.R nloptr/tests/testthat/test-derivative-checker.R nloptr/tests/testthat/systemofeq.R nloptr/tests/testthat/parameters.R nloptr/tests/test-all.R nloptr/src/ nloptr/src/Makevars nloptr/src/dummy.cpp nloptr/src/Makevars.win nloptr/src/nloptr.c nloptr/NAMESPACE nloptr/CHANGELOG nloptr/data/ nloptr/data/nloptr.default.options.rda nloptr/R/ nloptr/R/slsqp.R nloptr/R/check.derivatives.R nloptr/R/cobyla.R nloptr/R/tnewton.R nloptr/R/varmetric.R nloptr/R/direct.R nloptr/R/mlsl.R nloptr/R/nloptr.R nloptr/R/auglag.R nloptr/R/nloptions.R nloptr/R/finite.diff.R nloptr/R/nm.R nloptr/R/lbfgs.R nloptr/R/print.nloptr.R nloptr/R/gradients.R nloptr/R/nloptr.add.default.options.R nloptr/R/nloptr.print.options.R nloptr/R/is.nloptr.R nloptr/R/global.R nloptr/R/mma.R nloptr/vignettes/ nloptr/vignettes/reflist.bib nloptr/vignettes/nloptr.Rnw nloptr/MD5 nloptr/build/ nloptr/build/vignette.rds nloptr/DESCRIPTION nloptr/man/ nloptr/man/crs2lm.Rd nloptr/man/varmetric.Rd nloptr/man/check.derivatives.Rd nloptr/man/cobyla.Rd nloptr/man/sbplx.Rd nloptr/man/nloptr.print.options.Rd nloptr/man/isres.Rd nloptr/man/auglag.Rd nloptr/man/bobyqa.Rd nloptr/man/nloptr.default.options.Rd nloptr/man/newuoa.Rd nloptr/man/mlsl.Rd nloptr/man/nloptions.Rd nloptr/man/nloptr-package.Rd nloptr/man/tnewton.Rd nloptr/man/neldermead.Rd nloptr/man/stogo.Rd nloptr/man/is.nloptr.Rd nloptr/man/print.nloptr.Rd nloptr/man/slsqp.Rd nloptr/man/gradients.Rd nloptr/man/direct.Rd nloptr/man/lbfgs.Rd nloptr/man/mma.Rd nloptr/man/nloptr.Rd nloptr/INSTALL.windows sudo -u fink-bld [ENV] sh -c /tmp/fink.Sot0q /tmp/fink.lgBIn #!/bin/bash -ev export TMPDIR=/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/tmp BIN_R=/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/bin/R pushd .. /sw/build.build/cran-nloptr-r30-1.0.0-1 /sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr if [[ 3.0 > 2.15 ]]; then $BIN_R --verbose CMD build --no-build-vignettes nloptr else $BIN_R --verbose CMD build --no-vignettes nloptr fi * checking for file 'nloptr/DESCRIPTION' ... OK * preparing 'nloptr': * checking DESCRIPTION meta-information ... OK * cleaning src * checking vignette meta-information ... OK * checking for LF line-endings in source and make files * checking for empty or unneeded directories * looking to see if a 'data/datalist' file should be added * building 'nloptr_1.0.0.tar.gz' /bin/rm -rf /sw/build.build/root-cran-nloptr-r30-1.0.0-1 /bin/mkdir -p /sw/build.build/root-cran-nloptr-r30-1.0.0-1/sw /bin/mkdir -p /sw/build.build/root-cran-nloptr-r30-1.0.0-1/DEBIAN /usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-cran-nloptr-r30-1.0.0-1 sudo -u fink-bld [ENV] sh -c /tmp/fink.4swqN /tmp/fink.BUdid #!/bin/sh -ev BIN_R=/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/bin/R mkdir -p /sw/build.build/root-cran-nloptr-r30-1.0.0-1/sw/lib/R/3.0/site-library pushd /sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/.. && $BIN_R --verbose CMD install --library=/sw/build.build/root-cran-nloptr-r30-1.0.0-1/sw/lib/R/3.0/site-library nloptr /sw/build.build/cran-nloptr-r30-1.0.0-1 /sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr * installing *source* package 'nloptr' ... ** package 'nloptr' successfully unpacked and MD5 sums checked ** libs `"/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/bin/Rscript" --vanilla -e "download.file(url='http://ab-initio.mit.edu/nlopt/nlopt-2.4.tar.gz', destfile='nlopt-2.4.tar.gz')"` trying URL 'http://ab-initio.mit.edu/nlopt/nlopt-2.4.tar.gz' Content type 'application/x-gzip' length 2360753 bytes (2.3 Mb) opened URL ================================================== downloaded 2.3 Mb `"/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/bin/Rscript" --vanilla -e "untar(tarfile='nlopt-2.4.tar.gz')"` rm -rf nlopt-2.4.tar.gz echo "Installing library to: `pwd`/nlopt-2.4" Installing library to: /sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4 cd nlopt-2.4; \ ed -s isres/isres.c <<< $'H\n,s/sqrt(/sqrt((double) /g\nw'; \ ed -s util/qsort_r.c <<< $'H\n1i\nextern "C" {\n.\nw'; \ ed -s util/qsort_r.c <<< $'H\n$a\n}\n.\nw'; \ ./configure --prefix="`pwd`" --enable-shared --enable-static --without-octave --without-matlab --without-guile --without-python --with-cxx CC="`"/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/bin/R" CMD config CC`" CFLAGS="`"/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/bin/R" CMD config CFLAGS`" CPP="`"/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/bin/R" CMD config CPP`" CPPFLAGS="`"/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/bin/R" CMD config CPPFLAGS`" CXX="`"/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/bin/R" CMD config CXX`" CXXFLAGS="`"/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/bin/R" CMD config CXXFLAGS`" CXXCPP="`"/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/bin/R" CMD config CXXCPP`"; \ make; \ make install; \ ls | grep -v ^include$ | grep -v ^lib$ | xargs rm -rf; \ rm -rf .libs; checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... ./install-sh -c -d checking for gawk... no checking for mawk... no checking for nawk... no checking for awk... awk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for gcc... flag-sort -r gcc -ffor-scope checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether flag-sort -r gcc -ffor-scope accepts -g... yes checking for flag-sort -r gcc -ffor-scope option to accept ISO C89... none needed checking whether flag-sort -r gcc -ffor-scope understands -c and -o together... rm: conftest.dSYM: is a directory yes checking for style of include used by make... GNU checking dependency style of flag-sort -r gcc -ffor-scope... gcc3 checking for flag-sort -r gcc -ffor-scope option to accept ISO C99... none needed checking for flag-sort -r gcc -ffor-scope option to accept ISO Standard C... (cached) none needed checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking build system type... x86_64-apple-darwin13.3.0 checking host system type... x86_64-apple-darwin13.3.0 checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by flag-sort -r gcc -ffor-scope... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm checking the name lister (/usr/bin/nm) interface... rm: conftest.dSYM: is a directory BSD nm checking the maximum length of command line arguments... 196608 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-apple-darwin13.3.0 file names to x86_64-apple-darwin13.3.0 format... func_convert_file_noop checking how to convert x86_64-apple-darwin13.3.0 file names to toolchain format... func_convert_file_noop checking for /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... dlltool checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... rm: conftest.dSYM: is a directory no checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm output from flag-sort -r gcc -ffor-scope object... rm: conftest.dSYM: is a directory ok checking for sysroot... no checking for mt... no checking if : is a manifest tool... no checking for dsymutil... dsymutil checking for nmedit... nmedit checking for lipo... lipo checking for otool... otool checking for otool64... no checking for -single_module linker flag... yes checking for -exported_symbols_list linker flag... yes checking for -force_load linker flag... yes checking how to run the C preprocessor... flag-sort -r gcc -ffor-scope -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if flag-sort -r gcc -ffor-scope supports -fno-rtti -fno-exceptions... yes checking for flag-sort -r gcc -ffor-scope option to produce PIC... -fno-common -DPIC checking if flag-sort -r gcc -ffor-scope PIC flag -fno-common -DPIC works... yes checking if flag-sort -r gcc -ffor-scope static flag -static works... no checking if flag-sort -r gcc -ffor-scope supports -c -o file.o... yes checking if flag-sort -r gcc -ffor-scope supports -c -o file.o... (cached) yes checking whether the flag-sort -r gcc -ffor-scope linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin13.3.0 dyld checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking whether we are using the GNU C++ compiler... yes checking whether flag-sort -r g++ accepts -g... yes checking dependency style of flag-sort -r g++... gcc3 checking how to run the C++ preprocessor... flag-sort -r g++ -E checking for ld used by flag-sort -r g++... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no checking whether the flag-sort -r g++ linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking for flag-sort -r g++ option to produce PIC... -fno-common -DPIC checking if flag-sort -r g++ PIC flag -fno-common -DPIC works... yes checking if flag-sort -r g++ static flag -static works... no checking if flag-sort -r g++ supports -c -o file.o... yes checking if flag-sort -r g++ supports -c -o file.o... (cached) yes checking whether the flag-sort -r g++ linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin13.3.0 dyld checking how to hardcode library paths into programs... immediate checking for ANSI C header files... (cached) yes checking whether time.h and sys/time.h may both be included... yes checking for unistd.h... (cached) yes checking getopt.h usability... yes checking getopt.h presence... yes checking for getopt.h... yes checking for stdint.h... (cached) yes checking for an ANSI C-conforming const... yes checking for inline... inline checking for C thread-local keyword... __thread checking size of unsigned int... 4 checking size of unsigned long... 8 checking for uint32_t... yes checking for sin in -lm... yes checking for BSDgettimeofday... no checking for gettimeofday... yes checking for time... yes checking for qsort_r... yes checking for getpid... yes checking for gettid syscall... yes checking for isnan... yes checking for isinf... yes checking for copysign... yes checking for mkoctfile... no checking for mex... no checking for working HUGE_VAL... ok checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating nlopt.pc config.status: creating api/Makefile config.status: creating util/Makefile config.status: creating octave/Makefile config.status: creating direct/Makefile config.status: creating cdirect/Makefile config.status: creating stogo/Makefile config.status: creating praxis/Makefile config.status: creating luksan/Makefile config.status: creating crs/Makefile config.status: creating mlsl/Makefile config.status: creating mma/Makefile config.status: creating cobyla/Makefile config.status: creating newuoa/Makefile config.status: creating neldermead/Makefile config.status: creating auglag/Makefile config.status: creating bobyqa/Makefile config.status: creating isres/Makefile config.status: creating slsqp/Makefile config.status: creating esch/Makefile config.status: creating test/Makefile config.status: creating swig/Makefile config.status: creating swig/nlopt.scm config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands make all-recursive Making all in util /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I/sw/include -g -O3 -MT mt19937ar.lo -MD -MP -MF .deps/mt19937ar.Tpo -c -o mt19937ar.lo mt19937ar.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I/sw/include -g -O3 -MT mt19937ar.lo -MD -MP -MF .deps/mt19937ar.Tpo -c mt19937ar.c -fno-common -DPIC -o .libs/mt19937ar.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I/sw/include -g -O3 -MT mt19937ar.lo -MD -MP -MF .deps/mt19937ar.Tpo -c mt19937ar.c -o mt19937ar.o >/dev/null 2>&1 mv -f .deps/mt19937ar.Tpo .deps/mt19937ar.Plo /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I/sw/include -g -O3 -MT sobolseq.lo -MD -MP -MF .deps/sobolseq.Tpo -c -o sobolseq.lo sobolseq.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I/sw/include -g -O3 -MT sobolseq.lo -MD -MP -MF .deps/sobolseq.Tpo -c sobolseq.c -fno-common -DPIC -o .libs/sobolseq.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I/sw/include -g -O3 -MT sobolseq.lo -MD -MP -MF .deps/sobolseq.Tpo -c sobolseq.c -o sobolseq.o >/dev/null 2>&1 mv -f .deps/sobolseq.Tpo .deps/sobolseq.Plo /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I/sw/include -g -O3 -MT timer.lo -MD -MP -MF .deps/timer.Tpo -c -o timer.lo timer.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I/sw/include -g -O3 -MT timer.lo -MD -MP -MF .deps/timer.Tpo -c timer.c -fno-common -DPIC -o .libs/timer.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I/sw/include -g -O3 -MT timer.lo -MD -MP -MF .deps/timer.Tpo -c timer.c -o timer.o >/dev/null 2>&1 mv -f .deps/timer.Tpo .deps/timer.Plo /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I/sw/include -g -O3 -MT stop.lo -MD -MP -MF .deps/stop.Tpo -c -o stop.lo stop.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I/sw/include -g -O3 -MT stop.lo -MD -MP -MF .deps/stop.Tpo -c stop.c -fno-common -DPIC -o .libs/stop.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I/sw/include -g -O3 -MT stop.lo -MD -MP -MF .deps/stop.Tpo -c stop.c -o stop.o >/dev/null 2>&1 mv -f .deps/stop.Tpo .deps/stop.Plo /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I/sw/include -g -O3 -MT redblack.lo -MD -MP -MF .deps/redblack.Tpo -c -o redblack.lo redblack.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I/sw/include -g -O3 -MT redblack.lo -MD -MP -MF .deps/redblack.Tpo -c redblack.c -fno-common -DPIC -o .libs/redblack.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I/sw/include -g -O3 -MT redblack.lo -MD -MP -MF .deps/redblack.Tpo -c redblack.c -o redblack.o >/dev/null 2>&1 mv -f .deps/redblack.Tpo .deps/redblack.Plo /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I/sw/include -g -O3 -MT qsort_r.lo -MD -MP -MF .deps/qsort_r.Tpo -c -o qsort_r.lo qsort_r.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I/sw/include -g -O3 -MT qsort_r.lo -MD -MP -MF .deps/qsort_r.Tpo -c qsort_r.c -fno-common -DPIC -o .libs/qsort_r.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I/sw/include -g -O3 -MT qsort_r.lo -MD -MP -MF .deps/qsort_r.Tpo -c qsort_r.c -o qsort_r.o >/dev/null 2>&1 mv -f .deps/qsort_r.Tpo .deps/qsort_r.Plo /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I/sw/include -g -O3 -MT rescale.lo -MD -MP -MF .deps/rescale.Tpo -c -o rescale.lo rescale.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I/sw/include -g -O3 -MT rescale.lo -MD -MP -MF .deps/rescale.Tpo -c rescale.c -fno-common -DPIC -o .libs/rescale.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I/sw/include -g -O3 -MT rescale.lo -MD -MP -MF .deps/rescale.Tpo -c rescale.c -o rescale.o >/dev/null 2>&1 mv -f .deps/rescale.Tpo .deps/rescale.Plo /bin/sh ../libtool --tag=CC --mode=link flag-sort -r g++ -g -O3 -L/sw/lib -o libutil.la mt19937ar.lo sobolseq.lo timer.lo stop.lo redblack.lo qsort_r.lo rescale.lo -lm libtool: link: ar cru .libs/libutil.a .libs/mt19937ar.o .libs/sobolseq.o .libs/timer.o .libs/stop.o .libs/redblack.o .libs/qsort_r.o .libs/rescale.o libtool: link: ranlib .libs/libutil.a libtool: link: ( cd ".libs" && rm -f "libutil.la" && ln -s "../libutil.la" "libutil.la" ) flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I/sw/include -g -O3 -MT redblack_test.o -MD -MP -MF .deps/redblack_test.Tpo -c -o redblack_test.o redblack_test.c clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated mv -f .deps/redblack_test.Tpo .deps/redblack_test.Po /bin/sh ../libtool --tag=CC --mode=link flag-sort -r g++ -g -O3 -L/sw/lib -o redblack_test redblack_test.o libutil.la -lm libtool: link: flag-sort -r g++ -g -O3 -o redblack_test redblack_test.o -L/sw/lib ./.libs/libutil.a -lm Making all in direct /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT DIRect.lo -MD -MP -MF .deps/DIRect.Tpo -c -o DIRect.lo DIRect.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT DIRect.lo -MD -MP -MF .deps/DIRect.Tpo -c DIRect.c -fno-common -DPIC -o .libs/DIRect.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT DIRect.lo -MD -MP -MF .deps/DIRect.Tpo -c DIRect.c -o DIRect.o >/dev/null 2>&1 mv -f .deps/DIRect.Tpo .deps/DIRect.Plo /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT direct_wrap.lo -MD -MP -MF .deps/direct_wrap.Tpo -c -o direct_wrap.lo direct_wrap.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT direct_wrap.lo -MD -MP -MF .deps/direct_wrap.Tpo -c direct_wrap.c -fno-common -DPIC -o .libs/direct_wrap.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT direct_wrap.lo -MD -MP -MF .deps/direct_wrap.Tpo -c direct_wrap.c -o direct_wrap.o >/dev/null 2>&1 mv -f .deps/direct_wrap.Tpo .deps/direct_wrap.Plo /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT DIRserial.lo -MD -MP -MF .deps/DIRserial.Tpo -c -o DIRserial.lo DIRserial.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT DIRserial.lo -MD -MP -MF .deps/DIRserial.Tpo -c DIRserial.c -fno-common -DPIC -o .libs/DIRserial.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT DIRserial.lo -MD -MP -MF .deps/DIRserial.Tpo -c DIRserial.c -o DIRserial.o >/dev/null 2>&1 mv -f .deps/DIRserial.Tpo .deps/DIRserial.Plo /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT DIRsubrout.lo -MD -MP -MF .deps/DIRsubrout.Tpo -c -o DIRsubrout.lo DIRsubrout.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT DIRsubrout.lo -MD -MP -MF .deps/DIRsubrout.Tpo -c DIRsubrout.c -fno-common -DPIC -o .libs/DIRsubrout.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT DIRsubrout.lo -MD -MP -MF .deps/DIRsubrout.Tpo -c DIRsubrout.c -o DIRsubrout.o >/dev/null 2>&1 mv -f .deps/DIRsubrout.Tpo .deps/DIRsubrout.Plo /bin/sh ../libtool --tag=CC --mode=link flag-sort -r g++ -g -O3 -L/sw/lib -o libdirect.la DIRect.lo direct_wrap.lo DIRserial.lo DIRsubrout.lo -lm libtool: link: ar cru .libs/libdirect.a .libs/DIRect.o .libs/direct_wrap.o .libs/DIRserial.o .libs/DIRsubrout.o libtool: link: ranlib .libs/libdirect.a libtool: link: ( cd ".libs" && rm -f "libdirect.la" && ln -s "../libdirect.la" "libdirect.la" ) Making all in cdirect /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT cdirect.lo -MD -MP -MF .deps/cdirect.Tpo -c -o cdirect.lo cdirect.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT cdirect.lo -MD -MP -MF .deps/cdirect.Tpo -c cdirect.c -fno-common -DPIC -o .libs/cdirect.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT cdirect.lo -MD -MP -MF .deps/cdirect.Tpo -c cdirect.c -o cdirect.o >/dev/null 2>&1 mv -f .deps/cdirect.Tpo .deps/cdirect.Plo /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT hybrid.lo -MD -MP -MF .deps/hybrid.Tpo -c -o hybrid.lo hybrid.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT hybrid.lo -MD -MP -MF .deps/hybrid.Tpo -c hybrid.c -fno-common -DPIC -o .libs/hybrid.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated hybrid.c:91:12: warning: 'nlopt_minimize' is deprecated [-Wdeprecated-declarations] ret = nlopt_minimize(p->local_alg, n, fcount, p, ^ ../api/nlopt.h:330:28: note: 'nlopt_minimize' declared here NLOPT_EXTERN(nlopt_result) nlopt_minimize( ^ 1 warning generated. libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT hybrid.lo -MD -MP -MF .deps/hybrid.Tpo -c hybrid.c -o hybrid.o >/dev/null 2>&1 mv -f .deps/hybrid.Tpo .deps/hybrid.Plo /bin/sh ../libtool --tag=CC --mode=link flag-sort -r g++ -g -O3 -L/sw/lib -o libcdirect.la cdirect.lo hybrid.lo -lm libtool: link: ar cru .libs/libcdirect.a .libs/cdirect.o .libs/hybrid.o libtool: link: ranlib .libs/libcdirect.a libtool: link: ( cd ".libs" && rm -f "libcdirect.la" && ln -s "../libcdirect.la" "libcdirect.la" ) Making all in stogo /bin/sh ../libtool --tag=CXX --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT global.lo -MD -MP -MF .deps/global.Tpo -c -o global.lo global.cc libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT global.lo -MD -MP -MF .deps/global.Tpo -c global.cc -fno-common -DPIC -o .libs/global.o libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT global.lo -MD -MP -MF .deps/global.Tpo -c global.cc -o global.o >/dev/null 2>&1 mv -f .deps/global.Tpo .deps/global.Plo /bin/sh ../libtool --tag=CXX --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT linalg.lo -MD -MP -MF .deps/linalg.Tpo -c -o linalg.lo linalg.cc libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT linalg.lo -MD -MP -MF .deps/linalg.Tpo -c linalg.cc -fno-common -DPIC -o .libs/linalg.o libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT linalg.lo -MD -MP -MF .deps/linalg.Tpo -c linalg.cc -o linalg.o >/dev/null 2>&1 mv -f .deps/linalg.Tpo .deps/linalg.Plo /bin/sh ../libtool --tag=CXX --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT local.lo -MD -MP -MF .deps/local.Tpo -c -o local.lo local.cc libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT local.lo -MD -MP -MF .deps/local.Tpo -c local.cc -fno-common -DPIC -o .libs/local.o libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT local.lo -MD -MP -MF .deps/local.Tpo -c local.cc -o local.o >/dev/null 2>&1 mv -f .deps/local.Tpo .deps/local.Plo /bin/sh ../libtool --tag=CXX --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT stogo.lo -MD -MP -MF .deps/stogo.Tpo -c -o stogo.lo stogo.cc libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT stogo.lo -MD -MP -MF .deps/stogo.Tpo -c stogo.cc -fno-common -DPIC -o .libs/stogo.o libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT stogo.lo -MD -MP -MF .deps/stogo.Tpo -c stogo.cc -o stogo.o >/dev/null 2>&1 mv -f .deps/stogo.Tpo .deps/stogo.Plo /bin/sh ../libtool --tag=CXX --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT tools.lo -MD -MP -MF .deps/tools.Tpo -c -o tools.lo tools.cc libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT tools.lo -MD -MP -MF .deps/tools.Tpo -c tools.cc -fno-common -DPIC -o .libs/tools.o libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT tools.lo -MD -MP -MF .deps/tools.Tpo -c tools.cc -o tools.o >/dev/null 2>&1 mv -f .deps/tools.Tpo .deps/tools.Plo /bin/sh ../libtool --tag=CXX --mode=link flag-sort -r g++ -g -O3 -L/sw/lib -o libstogo.la global.lo linalg.lo local.lo stogo.lo tools.lo -lm libtool: link: ar cru .libs/libstogo.a .libs/global.o .libs/linalg.o .libs/local.o .libs/stogo.o .libs/tools.o libtool: link: ranlib .libs/libstogo.a libtool: link: ( cd ".libs" && rm -f "libstogo.la" && ln -s "../libstogo.la" "libstogo.la" ) Making all in praxis /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT praxis.lo -MD -MP -MF .deps/praxis.Tpo -c -o praxis.lo praxis.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT praxis.lo -MD -MP -MF .deps/praxis.Tpo -c praxis.c -fno-common -DPIC -o .libs/praxis.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT praxis.lo -MD -MP -MF .deps/praxis.Tpo -c praxis.c -o praxis.o >/dev/null 2>&1 mv -f .deps/praxis.Tpo .deps/praxis.Plo /bin/sh ../libtool --tag=CC --mode=link flag-sort -r g++ -g -O3 -L/sw/lib -o libpraxis.la praxis.lo -lm libtool: link: ar cru .libs/libpraxis.a .libs/praxis.o libtool: link: ranlib .libs/libpraxis.a libtool: link: ( cd ".libs" && rm -f "libpraxis.la" && ln -s "../libpraxis.la" "libpraxis.la" ) Making all in luksan /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT plis.lo -MD -MP -MF .deps/plis.Tpo -c -o plis.lo plis.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT plis.lo -MD -MP -MF .deps/plis.Tpo -c plis.c -fno-common -DPIC -o .libs/plis.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT plis.lo -MD -MP -MF .deps/plis.Tpo -c plis.c -o plis.o >/dev/null 2>&1 mv -f .deps/plis.Tpo .deps/plis.Plo /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT plip.lo -MD -MP -MF .deps/plip.Tpo -c -o plip.lo plip.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT plip.lo -MD -MP -MF .deps/plip.Tpo -c plip.c -fno-common -DPIC -o .libs/plip.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT plip.lo -MD -MP -MF .deps/plip.Tpo -c plip.c -o plip.o >/dev/null 2>&1 mv -f .deps/plip.Tpo .deps/plip.Plo /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT pnet.lo -MD -MP -MF .deps/pnet.Tpo -c -o pnet.lo pnet.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT pnet.lo -MD -MP -MF .deps/pnet.Tpo -c pnet.c -fno-common -DPIC -o .libs/pnet.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT pnet.lo -MD -MP -MF .deps/pnet.Tpo -c pnet.c -o pnet.o >/dev/null 2>&1 mv -f .deps/pnet.Tpo .deps/pnet.Plo /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT mssubs.lo -MD -MP -MF .deps/mssubs.Tpo -c -o mssubs.lo mssubs.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT mssubs.lo -MD -MP -MF .deps/mssubs.Tpo -c mssubs.c -fno-common -DPIC -o .libs/mssubs.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT mssubs.lo -MD -MP -MF .deps/mssubs.Tpo -c mssubs.c -o mssubs.o >/dev/null 2>&1 mv -f .deps/mssubs.Tpo .deps/mssubs.Plo /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT pssubs.lo -MD -MP -MF .deps/pssubs.Tpo -c -o pssubs.lo pssubs.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT pssubs.lo -MD -MP -MF .deps/pssubs.Tpo -c pssubs.c -fno-common -DPIC -o .libs/pssubs.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT pssubs.lo -MD -MP -MF .deps/pssubs.Tpo -c pssubs.c -o pssubs.o >/dev/null 2>&1 mv -f .deps/pssubs.Tpo .deps/pssubs.Plo /bin/sh ../libtool --tag=CC --mode=link flag-sort -r g++ -g -O3 -L/sw/lib -o libluksan.la plis.lo plip.lo pnet.lo mssubs.lo pssubs.lo -lm libtool: link: ar cru .libs/libluksan.a .libs/plis.o .libs/plip.o .libs/pnet.o .libs/mssubs.o .libs/pssubs.o libtool: link: ranlib .libs/libluksan.a libtool: link: ( cd ".libs" && rm -f "libluksan.la" && ln -s "../libluksan.la" "libluksan.la" ) Making all in crs /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT crs.lo -MD -MP -MF .deps/crs.Tpo -c -o crs.lo crs.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT crs.lo -MD -MP -MF .deps/crs.Tpo -c crs.c -fno-common -DPIC -o .libs/crs.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT crs.lo -MD -MP -MF .deps/crs.Tpo -c crs.c -o crs.o >/dev/null 2>&1 mv -f .deps/crs.Tpo .deps/crs.Plo /bin/sh ../libtool --tag=CC --mode=link flag-sort -r g++ -g -O3 -L/sw/lib -o libcrs.la crs.lo -lm libtool: link: ar cru .libs/libcrs.a .libs/crs.o libtool: link: ranlib .libs/libcrs.a libtool: link: ( cd ".libs" && rm -f "libcrs.la" && ln -s "../libcrs.la" "libcrs.la" ) Making all in mlsl /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT mlsl.lo -MD -MP -MF .deps/mlsl.Tpo -c -o mlsl.lo mlsl.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT mlsl.lo -MD -MP -MF .deps/mlsl.Tpo -c mlsl.c -fno-common -DPIC -o .libs/mlsl.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT mlsl.lo -MD -MP -MF .deps/mlsl.Tpo -c mlsl.c -o mlsl.o >/dev/null 2>&1 mv -f .deps/mlsl.Tpo .deps/mlsl.Plo /bin/sh ../libtool --tag=CC --mode=link flag-sort -r g++ -g -O3 -L/sw/lib -o libmlsl.la mlsl.lo -lm libtool: link: ar cru .libs/libmlsl.a .libs/mlsl.o libtool: link: ranlib .libs/libmlsl.a libtool: link: ( cd ".libs" && rm -f "libmlsl.la" && ln -s "../libmlsl.la" "libmlsl.la" ) Making all in mma /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT mma.lo -MD -MP -MF .deps/mma.Tpo -c -o mma.lo mma.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT mma.lo -MD -MP -MF .deps/mma.Tpo -c mma.c -fno-common -DPIC -o .libs/mma.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT mma.lo -MD -MP -MF .deps/mma.Tpo -c mma.c -o mma.o >/dev/null 2>&1 mv -f .deps/mma.Tpo .deps/mma.Plo /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT ccsa_quadratic.lo -MD -MP -MF .deps/ccsa_quadratic.Tpo -c -o ccsa_quadratic.lo ccsa_quadratic.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT ccsa_quadratic.lo -MD -MP -MF .deps/ccsa_quadratic.Tpo -c ccsa_quadratic.c -fno-common -DPIC -o .libs/ccsa_quadratic.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT ccsa_quadratic.lo -MD -MP -MF .deps/ccsa_quadratic.Tpo -c ccsa_quadratic.c -o ccsa_quadratic.o >/dev/null 2>&1 mv -f .deps/ccsa_quadratic.Tpo .deps/ccsa_quadratic.Plo /bin/sh ../libtool --tag=CC --mode=link flag-sort -r g++ -g -O3 -L/sw/lib -o libmma.la mma.lo ccsa_quadratic.lo -lm libtool: link: ar cru .libs/libmma.a .libs/mma.o .libs/ccsa_quadratic.o libtool: link: ranlib .libs/libmma.a libtool: link: ( cd ".libs" && rm -f "libmma.la" && ln -s "../libmma.la" "libmma.la" ) Making all in cobyla /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT cobyla.lo -MD -MP -MF .deps/cobyla.Tpo -c -o cobyla.lo cobyla.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT cobyla.lo -MD -MP -MF .deps/cobyla.Tpo -c cobyla.c -fno-common -DPIC -o .libs/cobyla.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT cobyla.lo -MD -MP -MF .deps/cobyla.Tpo -c cobyla.c -o cobyla.o >/dev/null 2>&1 mv -f .deps/cobyla.Tpo .deps/cobyla.Plo /bin/sh ../libtool --tag=CC --mode=link flag-sort -r g++ -g -O3 -L/sw/lib -o libcobyla.la cobyla.lo -lm libtool: link: ar cru .libs/libcobyla.a .libs/cobyla.o libtool: link: ranlib .libs/libcobyla.a libtool: link: ( cd ".libs" && rm -f "libcobyla.la" && ln -s "../libcobyla.la" "libcobyla.la" ) Making all in newuoa /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT newuoa.lo -MD -MP -MF .deps/newuoa.Tpo -c -o newuoa.lo newuoa.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT newuoa.lo -MD -MP -MF .deps/newuoa.Tpo -c newuoa.c -fno-common -DPIC -o .libs/newuoa.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated newuoa.c:184:9: warning: 'nlopt_minimize_constrained' is deprecated [-Wdeprecated-declarations] ret = nlopt_minimize_constrained(NLOPT_LD_MMA, *n, quad_model, &qmd, ^ ../api/nlopt.h:340:28: note: 'nlopt_minimize_constrained' declared here NLOPT_EXTERN(nlopt_result) nlopt_minimize_constrained( ^ newuoa.c:1241:10: warning: 'nlopt_minimize_constrained' is deprecated [-Wdeprecated-declarations] return nlopt_minimize_constrained(NLOPT_LD_MMA, *n, lag, &ld, ^ ../api/nlopt.h:340:28: note: 'nlopt_minimize_constrained' declared here NLOPT_EXTERN(nlopt_result) nlopt_minimize_constrained( ^ 2 warnings generated. libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT newuoa.lo -MD -MP -MF .deps/newuoa.Tpo -c newuoa.c -o newuoa.o >/dev/null 2>&1 mv -f .deps/newuoa.Tpo .deps/newuoa.Plo /bin/sh ../libtool --tag=CC --mode=link flag-sort -r g++ -g -O3 -L/sw/lib -o libnewuoa.la newuoa.lo -lm libtool: link: ar cru .libs/libnewuoa.a .libs/newuoa.o libtool: link: ranlib .libs/libnewuoa.a libtool: link: ( cd ".libs" && rm -f "libnewuoa.la" && ln -s "../libnewuoa.la" "libnewuoa.la" ) Making all in neldermead /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT nldrmd.lo -MD -MP -MF .deps/nldrmd.Tpo -c -o nldrmd.lo nldrmd.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT nldrmd.lo -MD -MP -MF .deps/nldrmd.Tpo -c nldrmd.c -fno-common -DPIC -o .libs/nldrmd.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT nldrmd.lo -MD -MP -MF .deps/nldrmd.Tpo -c nldrmd.c -o nldrmd.o >/dev/null 2>&1 mv -f .deps/nldrmd.Tpo .deps/nldrmd.Plo /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT sbplx.lo -MD -MP -MF .deps/sbplx.Tpo -c -o sbplx.lo sbplx.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT sbplx.lo -MD -MP -MF .deps/sbplx.Tpo -c sbplx.c -fno-common -DPIC -o .libs/sbplx.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT sbplx.lo -MD -MP -MF .deps/sbplx.Tpo -c sbplx.c -o sbplx.o >/dev/null 2>&1 mv -f .deps/sbplx.Tpo .deps/sbplx.Plo /bin/sh ../libtool --tag=CC --mode=link flag-sort -r g++ -g -O3 -L/sw/lib -o libneldermead.la nldrmd.lo sbplx.lo -lm libtool: link: ar cru .libs/libneldermead.a .libs/nldrmd.o .libs/sbplx.o libtool: link: ranlib .libs/libneldermead.a libtool: link: ( cd ".libs" && rm -f "libneldermead.la" && ln -s "../libneldermead.la" "libneldermead.la" ) Making all in auglag /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT auglag.lo -MD -MP -MF .deps/auglag.Tpo -c -o auglag.lo auglag.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT auglag.lo -MD -MP -MF .deps/auglag.Tpo -c auglag.c -fno-common -DPIC -o .libs/auglag.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT auglag.lo -MD -MP -MF .deps/auglag.Tpo -c auglag.c -o auglag.o >/dev/null 2>&1 mv -f .deps/auglag.Tpo .deps/auglag.Plo /bin/sh ../libtool --tag=CC --mode=link flag-sort -r g++ -g -O3 -L/sw/lib -o libauglag.la auglag.lo -lm libtool: link: ar cru .libs/libauglag.a .libs/auglag.o libtool: link: ranlib .libs/libauglag.a libtool: link: ( cd ".libs" && rm -f "libauglag.la" && ln -s "../libauglag.la" "libauglag.la" ) Making all in bobyqa /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT bobyqa.lo -MD -MP -MF .deps/bobyqa.Tpo -c -o bobyqa.lo bobyqa.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT bobyqa.lo -MD -MP -MF .deps/bobyqa.Tpo -c bobyqa.c -fno-common -DPIC -o .libs/bobyqa.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT bobyqa.lo -MD -MP -MF .deps/bobyqa.Tpo -c bobyqa.c -o bobyqa.o >/dev/null 2>&1 mv -f .deps/bobyqa.Tpo .deps/bobyqa.Plo /bin/sh ../libtool --tag=CC --mode=link flag-sort -r g++ -g -O3 -L/sw/lib -o libbobyqa.la bobyqa.lo -lm libtool: link: ar cru .libs/libbobyqa.a .libs/bobyqa.o libtool: link: ranlib .libs/libbobyqa.a libtool: link: ( cd ".libs" && rm -f "libbobyqa.la" && ln -s "../libbobyqa.la" "libbobyqa.la" ) Making all in isres /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT isres.lo -MD -MP -MF .deps/isres.Tpo -c -o isres.lo isres.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT isres.lo -MD -MP -MF .deps/isres.Tpo -c isres.c -fno-common -DPIC -o .libs/isres.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT isres.lo -MD -MP -MF .deps/isres.Tpo -c isres.c -o isres.o >/dev/null 2>&1 mv -f .deps/isres.Tpo .deps/isres.Plo /bin/sh ../libtool --tag=CC --mode=link flag-sort -r g++ -g -O3 -L/sw/lib -o libisres.la isres.lo -lm libtool: link: ar cru .libs/libisres.a .libs/isres.o libtool: link: ranlib .libs/libisres.a libtool: link: ( cd ".libs" && rm -f "libisres.la" && ln -s "../libisres.la" "libisres.la" ) Making all in slsqp /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT slsqp.lo -MD -MP -MF .deps/slsqp.Tpo -c -o slsqp.lo slsqp.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT slsqp.lo -MD -MP -MF .deps/slsqp.Tpo -c slsqp.c -fno-common -DPIC -o .libs/slsqp.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT slsqp.lo -MD -MP -MF .deps/slsqp.Tpo -c slsqp.c -o slsqp.o >/dev/null 2>&1 mv -f .deps/slsqp.Tpo .deps/slsqp.Plo /bin/sh ../libtool --tag=CC --mode=link flag-sort -r g++ -g -O3 -L/sw/lib -o libslsqp.la slsqp.lo -lm libtool: link: ar cru .libs/libslsqp.a .libs/slsqp.o libtool: link: ranlib .libs/libslsqp.a libtool: link: ( cd ".libs" && rm -f "libslsqp.la" && ln -s "../libslsqp.la" "libslsqp.la" ) Making all in esch /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT esch.lo -MD -MP -MF .deps/esch.Tpo -c -o esch.lo esch.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT esch.lo -MD -MP -MF .deps/esch.Tpo -c esch.c -fno-common -DPIC -o .libs/esch.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../util -I../api -I/sw/include -g -O3 -MT esch.lo -MD -MP -MF .deps/esch.Tpo -c esch.c -o esch.o >/dev/null 2>&1 mv -f .deps/esch.Tpo .deps/esch.Plo /bin/sh ../libtool --tag=CC --mode=link flag-sort -r g++ -g -O3 -L/sw/lib -o libesch.la esch.lo -lm libtool: link: ar cru .libs/libesch.a .libs/esch.o libtool: link: ranlib .libs/libesch.a libtool: link: ( cd ".libs" && rm -f "libesch.la" && ln -s "../libesch.la" "libesch.la" ) Making all in api make all-am /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../cdirect -I../direct -I../stogo -I../praxis -I../lbfgs -I../luksan -I../crs -I../mlsl -I../mma -I../cobyla -I../newuoa -I../neldermead -I../auglag -I../bobyqa -I../isres -I../slsqp -I../esch -I../util -I/sw/include -g -O3 -MT general.lo -MD -MP -MF .deps/general.Tpo -c -o general.lo general.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../cdirect -I../direct -I../stogo -I../praxis -I../lbfgs -I../luksan -I../crs -I../mlsl -I../mma -I../cobyla -I../newuoa -I../neldermead -I../auglag -I../bobyqa -I../isres -I../slsqp -I../esch -I../util -I/sw/include -g -O3 -MT general.lo -MD -MP -MF .deps/general.Tpo -c general.c -fno-common -DPIC -o .libs/general.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../cdirect -I../direct -I../stogo -I../praxis -I../lbfgs -I../luksan -I../crs -I../mlsl -I../mma -I../cobyla -I../newuoa -I../neldermead -I../auglag -I../bobyqa -I../isres -I../slsqp -I../esch -I../util -I/sw/include -g -O3 -MT general.lo -MD -MP -MF .deps/general.Tpo -c general.c -o general.o >/dev/null 2>&1 mv -f .deps/general.Tpo .deps/general.Plo /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../cdirect -I../direct -I../stogo -I../praxis -I../lbfgs -I../luksan -I../crs -I../mlsl -I../mma -I../cobyla -I../newuoa -I../neldermead -I../auglag -I../bobyqa -I../isres -I../slsqp -I../esch -I../util -I/sw/include -g -O3 -MT options.lo -MD -MP -MF .deps/options.Tpo -c -o options.lo options.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../cdirect -I../direct -I../stogo -I../praxis -I../lbfgs -I../luksan -I../crs -I../mlsl -I../mma -I../cobyla -I../newuoa -I../neldermead -I../auglag -I../bobyqa -I../isres -I../slsqp -I../esch -I../util -I/sw/include -g -O3 -MT options.lo -MD -MP -MF .deps/options.Tpo -c options.c -fno-common -DPIC -o .libs/options.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../cdirect -I../direct -I../stogo -I../praxis -I../lbfgs -I../luksan -I../crs -I../mlsl -I../mma -I../cobyla -I../newuoa -I../neldermead -I../auglag -I../bobyqa -I../isres -I../slsqp -I../esch -I../util -I/sw/include -g -O3 -MT options.lo -MD -MP -MF .deps/options.Tpo -c options.c -o options.o >/dev/null 2>&1 mv -f .deps/options.Tpo .deps/options.Plo /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../cdirect -I../direct -I../stogo -I../praxis -I../lbfgs -I../luksan -I../crs -I../mlsl -I../mma -I../cobyla -I../newuoa -I../neldermead -I../auglag -I../bobyqa -I../isres -I../slsqp -I../esch -I../util -I/sw/include -g -O3 -MT optimize.lo -MD -MP -MF .deps/optimize.Tpo -c -o optimize.lo optimize.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../cdirect -I../direct -I../stogo -I../praxis -I../lbfgs -I../luksan -I../crs -I../mlsl -I../mma -I../cobyla -I../newuoa -I../neldermead -I../auglag -I../bobyqa -I../isres -I../slsqp -I../esch -I../util -I/sw/include -g -O3 -MT optimize.lo -MD -MP -MF .deps/optimize.Tpo -c optimize.c -fno-common -DPIC -o .libs/optimize.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../cdirect -I../direct -I../stogo -I../praxis -I../lbfgs -I../luksan -I../crs -I../mlsl -I../mma -I../cobyla -I../newuoa -I../neldermead -I../auglag -I../bobyqa -I../isres -I../slsqp -I../esch -I../util -I/sw/include -g -O3 -MT optimize.lo -MD -MP -MF .deps/optimize.Tpo -c optimize.c -o optimize.o >/dev/null 2>&1 mv -f .deps/optimize.Tpo .deps/optimize.Plo /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../cdirect -I../direct -I../stogo -I../praxis -I../lbfgs -I../luksan -I../crs -I../mlsl -I../mma -I../cobyla -I../newuoa -I../neldermead -I../auglag -I../bobyqa -I../isres -I../slsqp -I../esch -I../util -I/sw/include -g -O3 -MT deprecated.lo -MD -MP -MF .deps/deprecated.Tpo -c -o deprecated.lo deprecated.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../cdirect -I../direct -I../stogo -I../praxis -I../lbfgs -I../luksan -I../crs -I../mlsl -I../mma -I../cobyla -I../newuoa -I../neldermead -I../auglag -I../bobyqa -I../isres -I../slsqp -I../esch -I../util -I/sw/include -g -O3 -MT deprecated.lo -MD -MP -MF .deps/deprecated.Tpo -c deprecated.c -fno-common -DPIC -o .libs/deprecated.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../cdirect -I../direct -I../stogo -I../praxis -I../lbfgs -I../luksan -I../crs -I../mlsl -I../mma -I../cobyla -I../newuoa -I../neldermead -I../auglag -I../bobyqa -I../isres -I../slsqp -I../esch -I../util -I/sw/include -g -O3 -MT deprecated.lo -MD -MP -MF .deps/deprecated.Tpo -c deprecated.c -o deprecated.o >/dev/null 2>&1 mv -f .deps/deprecated.Tpo .deps/deprecated.Plo /bin/sh ../libtool --tag=CC --mode=compile flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../cdirect -I../direct -I../stogo -I../praxis -I../lbfgs -I../luksan -I../crs -I../mlsl -I../mma -I../cobyla -I../newuoa -I../neldermead -I../auglag -I../bobyqa -I../isres -I../slsqp -I../esch -I../util -I/sw/include -g -O3 -MT f77api.lo -MD -MP -MF .deps/f77api.Tpo -c -o f77api.lo f77api.c libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../cdirect -I../direct -I../stogo -I../praxis -I../lbfgs -I../luksan -I../crs -I../mlsl -I../mma -I../cobyla -I../newuoa -I../neldermead -I../auglag -I../bobyqa -I../isres -I../slsqp -I../esch -I../util -I/sw/include -g -O3 -MT f77api.lo -MD -MP -MF .deps/f77api.Tpo -c f77api.c -fno-common -DPIC -o .libs/f77api.o clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated In file included from f77api.c:103: ./f77funcs.h:57:14: warning: 'nlopt_minimize_constrained' is deprecated [-Wdeprecated-declarations] *info = nlopt_minimize_constrained((nlopt_algorithm) *algorithm, ^ ./nlopt.h:340:28: note: 'nlopt_minimize_constrained' declared here NLOPT_EXTERN(nlopt_result) nlopt_minimize_constrained( ^ In file included from f77api.c:103: ./f77funcs.h:96:6: warning: 'nlopt_get_local_search_algorithm' is deprecated [-Wdeprecated-declarations] nlopt_get_local_search_algorithm(&deriv, &nonderiv, maxeval); ^ ./nlopt.h:364:20: note: 'nlopt_get_local_search_algorithm' declared here NLOPT_EXTERN(void) nlopt_get_local_search_algorithm(nlopt_algorithm *deriv, ^ In file included from f77api.c:103: ./f77funcs.h:104:6: warning: 'nlopt_set_local_search_algorithm' is deprecated [-Wdeprecated-declarations] nlopt_set_local_search_algorithm(deriv, nonderiv, *maxeval); ^ ./nlopt.h:367:20: note: 'nlopt_set_local_search_algorithm' declared here NLOPT_EXTERN(void) nlopt_set_local_search_algorithm(nlopt_algorithm deriv, ^ In file included from f77api.c:103: ./f77funcs.h:109:13: warning: 'nlopt_get_stochastic_population' is deprecated [-Wdeprecated-declarations] *pop = nlopt_get_stochastic_population(); ^ ./nlopt.h:371:19: note: 'nlopt_get_stochastic_population' declared here NLOPT_EXTERN(int) nlopt_get_stochastic_population(void) NLOPT_DEPRECATED; ^ In file included from f77api.c:103: ./f77funcs.h:113:6: warning: 'nlopt_set_stochastic_population' is deprecated [-Wdeprecated-declarations] nlopt_set_stochastic_population(*pop); ^ ./nlopt.h:372:20: note: 'nlopt_set_stochastic_population' declared here NLOPT_EXTERN(void) nlopt_set_stochastic_population(int pop) NLOPT_DEPRECATED; ^ In file included from f77api.c:114: ./f77funcs.h:57:14: warning: 'nlopt_minimize_constrained' is deprecated [-Wdeprecated-declarations] *info = nlopt_minimize_constrained((nlopt_algorithm) *algorithm, ^ ./nlopt.h:340:28: note: 'nlopt_minimize_constrained' declared here NLOPT_EXTERN(nlopt_result) nlopt_minimize_constrained( ^ In file included from f77api.c:114: ./f77funcs.h:96:6: warning: 'nlopt_get_local_search_algorithm' is deprecated [-Wdeprecated-declarations] nlopt_get_local_search_algorithm(&deriv, &nonderiv, maxeval); ^ ./nlopt.h:364:20: note: 'nlopt_get_local_search_algorithm' declared here NLOPT_EXTERN(void) nlopt_get_local_search_algorithm(nlopt_algorithm *deriv, ^ In file included from f77api.c:114: ./f77funcs.h:104:6: warning: 'nlopt_set_local_search_algorithm' is deprecated [-Wdeprecated-declarations] nlopt_set_local_search_algorithm(deriv, nonderiv, *maxeval); ^ ./nlopt.h:367:20: note: 'nlopt_set_local_search_algorithm' declared here NLOPT_EXTERN(void) nlopt_set_local_search_algorithm(nlopt_algorithm deriv, ^ In file included from f77api.c:114: ./f77funcs.h:109:13: warning: 'nlopt_get_stochastic_population' is deprecated [-Wdeprecated-declarations] *pop = nlopt_get_stochastic_population(); ^ ./nlopt.h:371:19: note: 'nlopt_get_stochastic_population' declared here NLOPT_EXTERN(int) nlopt_get_stochastic_population(void) NLOPT_DEPRECATED; ^ In file included from f77api.c:114: ./f77funcs.h:113:6: warning: 'nlopt_set_stochastic_population' is deprecated [-Wdeprecated-declarations] nlopt_set_stochastic_population(*pop); ^ ./nlopt.h:372:20: note: 'nlopt_set_stochastic_population' declared here NLOPT_EXTERN(void) nlopt_set_stochastic_population(int pop) NLOPT_DEPRECATED; ^ In file included from f77api.c:129: ./f77funcs.h:57:14: warning: 'nlopt_minimize_constrained' is deprecated [-Wdeprecated-declarations] *info = nlopt_minimize_constrained((nlopt_algorithm) *algorithm, ^ ./nlopt.h:340:28: note: 'nlopt_minimize_constrained' declared here NLOPT_EXTERN(nlopt_result) nlopt_minimize_constrained( ^ In file included from f77api.c:129: ./f77funcs.h:96:6: warning: 'nlopt_get_local_search_algorithm' is deprecated [-Wdeprecated-declarations] nlopt_get_local_search_algorithm(&deriv, &nonderiv, maxeval); ^ ./nlopt.h:364:20: note: 'nlopt_get_local_search_algorithm' declared here NLOPT_EXTERN(void) nlopt_get_local_search_algorithm(nlopt_algorithm *deriv, ^ In file included from f77api.c:129: ./f77funcs.h:104:6: warning: 'nlopt_set_local_search_algorithm' is deprecated [-Wdeprecated-declarations] nlopt_set_local_search_algorithm(deriv, nonderiv, *maxeval); ^ ./nlopt.h:367:20: note: 'nlopt_set_local_search_algorithm' declared here NLOPT_EXTERN(void) nlopt_set_local_search_algorithm(nlopt_algorithm deriv, ^ In file included from f77api.c:129: ./f77funcs.h:109:13: warning: 'nlopt_get_stochastic_population' is deprecated [-Wdeprecated-declarations] *pop = nlopt_get_stochastic_population(); ^ ./nlopt.h:371:19: note: 'nlopt_get_stochastic_population' declared here NLOPT_EXTERN(int) nlopt_get_stochastic_population(void) NLOPT_DEPRECATED; ^ In file included from f77api.c:129: ./f77funcs.h:113:6: warning: 'nlopt_set_stochastic_population' is deprecated [-Wdeprecated-declarations] nlopt_set_stochastic_population(*pop); ^ ./nlopt.h:372:20: note: 'nlopt_set_stochastic_population' declared here NLOPT_EXTERN(void) nlopt_set_stochastic_population(int pop) NLOPT_DEPRECATED; ^ 15 warnings generated. libtool: compile: flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../cdirect -I../direct -I../stogo -I../praxis -I../lbfgs -I../luksan -I../crs -I../mlsl -I../mma -I../cobyla -I../newuoa -I../neldermead -I../auglag -I../bobyqa -I../isres -I../slsqp -I../esch -I../util -I/sw/include -g -O3 -MT f77api.lo -MD -MP -MF .deps/f77api.Tpo -c f77api.c -o f77api.o >/dev/null 2>&1 mv -f .deps/f77api.Tpo .deps/f77api.Plo /bin/sh ../libtool --tag=CC --mode=link flag-sort -r g++ -g -O3 -L/sw/lib -o libapi.la general.lo options.lo optimize.lo deprecated.lo f77api.lo -lm libtool: link: ar cru .libs/libapi.a .libs/general.o .libs/options.o .libs/optimize.o .libs/deprecated.o .libs/f77api.o libtool: link: ranlib .libs/libapi.a libtool: link: ( cd ".libs" && rm -f "libapi.la" && ln -s "../libapi.la" "libapi.la" ) Making all in . /bin/sh ./libtool --tag=CC --mode=link flag-sort -r g++ -g -O3 -version-info 8:0:8 -L/sw/lib -o libnlopt_cxx.la -rpath /sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/lib direct/libdirect.la cdirect/libcdirect.la stogo/libstogo.la praxis/libpraxis.la luksan/libluksan.la crs/libcrs.la mlsl/libmlsl.la mma/libmma.la cobyla/libcobyla.la newuoa/libnewuoa.la neldermead/libneldermead.la auglag/libauglag.la bobyqa/libbobyqa.la isres/libisres.la slsqp/libslsqp.la esch/libesch.la api/libapi.la util/libutil.la -lm libtool: link: flag-sort -r gcc -ffor-scope -dynamiclib -Wl,-undefined -Wl,dynamic_lookup -o .libs/libnlopt_cxx.0.dylib -Wl,-force_load,direct/.libs/libdirect.a -Wl,-force_load,cdirect/.libs/libcdirect.a -Wl,-force_load,stogo/.libs/libstogo.a -Wl,-force_load,praxis/.libs/libpraxis.a -Wl,-force_load,luksan/.libs/libluksan.a -Wl,-force_load,crs/.libs/libcrs.a -Wl,-force_load,mlsl/.libs/libmlsl.a -Wl,-force_load,mma/.libs/libmma.a -Wl,-force_load,cobyla/.libs/libcobyla.a -Wl,-force_load,newuoa/.libs/libnewuoa.a -Wl,-force_load,neldermead/.libs/libneldermead.a -Wl,-force_load,auglag/.libs/libauglag.a -Wl,-force_load,bobyqa/.libs/libbobyqa.a -Wl,-force_load,isres/.libs/libisres.a -Wl,-force_load,slsqp/.libs/libslsqp.a -Wl,-force_load,esch/.libs/libesch.a -Wl,-force_load,api/.libs/libapi.a -Wl,-force_load,util/.libs/libutil.a -L/sw/lib -lm -O3 -install_name /sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/lib/libnlopt_cxx.0.dylib -compatibility_version 9 -current_version 9.0 -Wl,-single_module libtool: link: (cd ".libs" && rm -f "libnlopt_cxx.dylib" && ln -s "libnlopt_cxx.0.dylib" "libnlopt_cxx.dylib") libtool: link: (cd .libs/libnlopt_cxx.lax/libdirect.a && ar x "/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/direct/.libs/libdirect.a") libtool: link: (cd .libs/libnlopt_cxx.lax/libcdirect.a && ar x "/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/cdirect/.libs/libcdirect.a") libtool: link: (cd .libs/libnlopt_cxx.lax/libstogo.a && ar x "/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/stogo/.libs/libstogo.a") libtool: link: (cd .libs/libnlopt_cxx.lax/libpraxis.a && ar x "/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/praxis/.libs/libpraxis.a") libtool: link: (cd .libs/libnlopt_cxx.lax/libluksan.a && ar x "/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/luksan/.libs/libluksan.a") libtool: link: (cd .libs/libnlopt_cxx.lax/libcrs.a && ar x "/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/crs/.libs/libcrs.a") libtool: link: (cd .libs/libnlopt_cxx.lax/libmlsl.a && ar x "/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/mlsl/.libs/libmlsl.a") libtool: link: (cd .libs/libnlopt_cxx.lax/libmma.a && ar x "/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/mma/.libs/libmma.a") libtool: link: (cd .libs/libnlopt_cxx.lax/libcobyla.a && ar x "/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/cobyla/.libs/libcobyla.a") libtool: link: (cd .libs/libnlopt_cxx.lax/libnewuoa.a && ar x "/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/newuoa/.libs/libnewuoa.a") libtool: link: (cd .libs/libnlopt_cxx.lax/libneldermead.a && ar x "/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/neldermead/.libs/libneldermead.a") libtool: link: (cd .libs/libnlopt_cxx.lax/libauglag.a && ar x "/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/auglag/.libs/libauglag.a") libtool: link: (cd .libs/libnlopt_cxx.lax/libbobyqa.a && ar x "/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/bobyqa/.libs/libbobyqa.a") libtool: link: (cd .libs/libnlopt_cxx.lax/libisres.a && ar x "/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/isres/.libs/libisres.a") libtool: link: (cd .libs/libnlopt_cxx.lax/libslsqp.a && ar x "/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/slsqp/.libs/libslsqp.a") libtool: link: (cd .libs/libnlopt_cxx.lax/libesch.a && ar x "/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/esch/.libs/libesch.a") libtool: link: (cd .libs/libnlopt_cxx.lax/libapi.a && ar x "/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/api/.libs/libapi.a") libtool: link: (cd .libs/libnlopt_cxx.lax/libutil.a && ar x "/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/util/.libs/libutil.a") libtool: link: ar cru .libs/libnlopt_cxx.a .libs/libnlopt_cxx.lax/libdirect.a/DIRect.o .libs/libnlopt_cxx.lax/libdirect.a/DIRserial.o .libs/libnlopt_cxx.lax/libdirect.a/DIRsubrout.o .libs/libnlopt_cxx.lax/libdirect.a/direct_wrap.o .libs/libnlopt_cxx.lax/libcdirect.a/cdirect.o .libs/libnlopt_cxx.lax/libcdirect.a/hybrid.o .libs/libnlopt_cxx.lax/libstogo.a/global.o .libs/libnlopt_cxx.lax/libstogo.a/linalg.o .libs/libnlopt_cxx.lax/libstogo.a/local.o .libs/libnlopt_cxx.lax/libstogo.a/stogo.o .libs/libnlopt_cxx.lax/libstogo.a/tools.o .libs/libnlopt_cxx.lax/libpraxis.a/praxis.o .libs/libnlopt_cxx.lax/libluksan.a/mssubs.o .libs/libnlopt_cxx.lax/libluksan.a/plip.o .libs/libnlopt_cxx.lax/libluksan.a/plis.o .libs/libnlopt_cxx.lax/libluksan.a/pnet.o .libs/libnlopt_cxx.lax/libluksan.a/pssubs.o .libs/libnlopt_cxx.lax/libcrs.a/crs.o .libs/libnlopt_cxx.lax/libmlsl.a/mlsl.o .libs/libnlopt_cxx.lax/libmma.a/ccsa_quadratic.o .libs/libnlopt_cxx.lax/libmma.a/mma.o .libs/libnlopt_cxx.lax/libcobyla.a/cobyla.o .libs/libnlopt_cxx.lax/libnewuoa.a/newuoa.o .libs/libnlopt_cxx.lax/libneldermead.a/nldrmd.o .libs/libnlopt_cxx.lax/libneldermead.a/sbplx.o .libs/libnlopt_cxx.lax/libauglag.a/auglag.o .libs/libnlopt_cxx.lax/libbobyqa.a/bobyqa.o .libs/libnlopt_cxx.lax/libisres.a/isres.o .libs/libnlopt_cxx.lax/libslsqp.a/slsqp.o .libs/libnlopt_cxx.lax/libesch.a/esch.o .libs/libnlopt_cxx.lax/libapi.a/deprecated.o .libs/libnlopt_cxx.lax/libapi.a/f77api.o .libs/libnlopt_cxx.lax/libapi.a/general.o .libs/libnlopt_cxx.lax/libapi.a/optimize.o .libs/libnlopt_cxx.lax/libapi.a/options.o .libs/libnlopt_cxx.lax/libutil.a/mt19937ar.o .libs/libnlopt_cxx.lax/libutil.a/qsort_r.o .libs/libnlopt_cxx.lax/libutil.a/redblack.o .libs/libnlopt_cxx.lax/libutil.a/rescale.o .libs/libnlopt_cxx.lax/libutil.a/sobolseq.o .libs/libnlopt_cxx.lax/libutil.a/stop.o .libs/libnlopt_cxx.lax/libutil.a/timer.o libtool: link: ranlib .libs/libnlopt_cxx.a libtool: link: rm -fr .libs/libnlopt_cxx.lax libtool: link: ( cd ".libs" && rm -f "libnlopt_cxx.la" && ln -s "../libnlopt_cxx.la" "libnlopt_cxx.la" ) Making all in octave make all-am flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I../util -I/sw/include -g -O3 -MT dummy.o -MD -MP -MF .deps/dummy.Tpo -c -o dummy.o dummy.c clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated mv -f .deps/dummy.Tpo .deps/dummy.Po /bin/sh ../libtool --tag=CC --mode=link flag-sort -r g++ -g -O3 -L/sw/lib -o dummy dummy.o -lm libtool: link: flag-sort -r g++ -g -O3 -o dummy dummy.o -L/sw/lib -lm Making all in test flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I../util -I/sw/include -g -O3 -MT testfuncs.o -MD -MP -MF .deps/testfuncs.Tpo -c -o testfuncs.o testfuncs.c clang: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated mv -f .deps/testfuncs.Tpo .deps/testfuncs.Po flag-sort -r g++ -DHAVE_CONFIG_H -I. -I.. -I../api -I../util -I/sw/include -g -O3 -MT testopt.o -MD -MP -MF .deps/testopt.Tpo -c -o testopt.o testopt.cpp testopt.cpp:218:11: warning: 'nlopt_minimize' is deprecated [-Wdeprecated-declarations] ret = nlopt_minimize(algorithm, ^ ../api/nlopt.h:330:28: note: 'nlopt_minimize' declared here NLOPT_EXTERN(nlopt_result) nlopt_minimize( ^ 1 warning generated. mv -f .deps/testopt.Tpo .deps/testopt.Po /bin/sh ../libtool --tag=CXX --mode=link flag-sort -r g++ -g -O3 -L/sw/lib -o testopt testfuncs.o testopt.o ../libnlopt_cxx.la -lm libtool: link: flag-sort -r g++ -g -O3 -o .libs/testopt testfuncs.o testopt.o -L/sw/lib ../.libs/libnlopt_cxx.dylib -lm Making all in swig make all-am make[4]: Nothing to be done for `all-am'. Making install in util make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. Making install in direct make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. Making install in cdirect make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. Making install in stogo make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. Making install in praxis make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. Making install in luksan make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. Making install in crs make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. Making install in mlsl make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. Making install in mma make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. Making install in cobyla make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. Making install in newuoa make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. Making install in neldermead make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. Making install in auglag make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. Making install in bobyqa make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. Making install in isres make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. Making install in slsqp make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. Making install in esch make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. Making install in api make install-am make[4]: Nothing to be done for `install-exec-am'. .././install-sh -c -d '/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/include' /usr/bin/install -c -m 644 nlopt.h nlopt.f nlopt.hpp '/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/include' .././install-sh -c -d '/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/share/man/man3' /usr/bin/install -c -m 644 nlopt.3 '/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/share/man/man3' Making install in . ./install-sh -c -d '/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/lib' /bin/sh ./libtool --mode=install /usr/bin/install -c libnlopt_cxx.la '/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/lib' libtool: install: /usr/bin/install -c .libs/libnlopt_cxx.0.dylib /sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/lib/libnlopt_cxx.0.dylib libtool: install: (cd /sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/lib && { ln -s -f libnlopt_cxx.0.dylib libnlopt_cxx.dylib || { rm -f libnlopt_cxx.dylib && ln -s libnlopt_cxx.0.dylib libnlopt_cxx.dylib; }; }) libtool: install: /usr/bin/install -c .libs/libnlopt_cxx.lai /sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/lib/libnlopt_cxx.la libtool: install: /usr/bin/install -c .libs/libnlopt_cxx.a /sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/lib/libnlopt_cxx.a libtool: install: chmod 644 /sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/lib/libnlopt_cxx.a libtool: install: ranlib /sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/lib/libnlopt_cxx.a ./install-sh -c -d '/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/lib/pkgconfig' /usr/bin/install -c -m 644 nlopt.pc '/sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/lib/pkgconfig' Making install in octave make install-am make[4]: Nothing to be done for `install-exec-am'. Making install in test make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. Making install in swig make install-am flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/include -DNDEBUG -I/sw/include -I`pwd`/nlopt-2.4/include -fPIC -g -O3 -c nloptr.c -o nloptr.o flag-sort -r g++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/sw/lib -o nloptr.dylib nloptr.o -lm /sw/build.build/cran-nloptr-r30-1.0.0-1/nloptr/src/nlopt-2.4/lib/libnlopt_cxx.a -L/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/lib -lR -lintl -Wl,-framework -Wl,CoreFoundation installing to /sw/build.build/root-cran-nloptr-r30-1.0.0-1/sw/lib/R/3.0/site-library/nloptr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** preparing package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (nloptr) install_name_tool -id /sw/lib/R/3.0/site-library/nloptr/libs/nloptr.dylib /sw/build.build/root-cran-nloptr-r30-1.0.0-1/sw/lib/R/3.0/site-library/nloptr/libs/nloptr.dylib sudo -u fink-bld [ENV] sh -c /tmp/fink.SlO9q /bin/rm -f /sw/build.build/root-cran-nloptr-r30-1.0.0-1/sw/info/dir /sw/build.build/root-cran-nloptr-r30-1.0.0-1/sw/info/dir.old /sw/build.build/root-cran-nloptr-r30-1.0.0-1/sw/share/info/dir /sw/build.build/root-cran-nloptr-r30-1.0.0-1/sw/share/info/dir.old Reverting ownership of install dir to root Writing control file... Creating shlibs files... Writing md5sums file... env LANG=C LC_ALL=C dpkg-deb -b root-cran-nloptr-r30-1.0.0-1 /sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods dpkg-deb: building package `cran-nloptr-r30' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods/cran-nloptr-r30_1.0.0-1_darwin-x86_64.deb'. Removing runtime build-lock... Removing build-lock package... /sw/bin/dpkg-lockwait -r fink-buildlock-cran-nloptr-r30-1.0.0-1 (Reading database ... 7385 files and directories currently installed.) Removing fink-buildlock-cran-nloptr-r30-1.0.0-1 ...