printf ' ' | fink --no-use-binary-dist --yes --build-as-nobody rebuild cran-nnet-r30 2>&1 The package 'cran-nnet-r30' will be built without being installed. Reading build dependency for cran-nnet-r30-7.3-8-2... Reading dependency for cran-nnet-r30-7.3-8-2... Reading build conflict for cran-nnet-r30-7.3-8-2... The package 'r-base30-dev' will be installed. Reading dependency for r-base30-dev-3.0.3-8... Reading runtime dependency for r-base30-dev-3.0.3-8... The package 'r-base30' will be installed. Reading dependency for r-base30-3.0.3-8... Reading runtime dependency for r-base30-3.0.3-8... The package 'r-base30-shlibs' will be installed. Reading dependency for r-base30-shlibs-3.0.3-8... Reading runtime dependency for r-base30-shlibs-3.0.3-8... The following package will be rebuilt: cran-nnet-r30 The following 3 additional packages will be installed: r-base30 r-base30-dev r-base30-shlibs Do you want to continue? [Y/n] (assuming default) Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/r-base30_3.0.3-8_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base30-shlibs_3.0.3-8_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base30-dev_3.0.3-8_darwin-x86_64.deb Selecting previously deselected package r-base30. (Reading database ... 7371 files and directories currently installed.) Unpacking r-base30 (from .../r-base30_3.0.3-8_darwin-x86_64.deb) ... Selecting previously deselected package r-base30-shlibs. Unpacking r-base30-shlibs (from .../r-base30-shlibs_3.0.3-8_darwin-x86_64.deb) ... Selecting previously deselected package r-base30-dev. dpkg: considering removing r-base31-dev in favour of r-base30-dev ... dpkg: yes, will remove r-base31-dev in favour of r-base30-dev. Unpacking r-base30-dev (from .../r-base30-dev_3.0.3-8_darwin-x86_64.deb) ... Setting up r-base30-shlibs (3.0.3-8) ... Setting up r-base30-dev (3.0.3-8) ... Setting up r-base30 (3.0.3-8) ... Setting runtime build-lock... dpkg-deb -b /sw/build.build/root-fink-buildlock-cran-nnet-r30-7.3-8-2 /sw/build.build dpkg-deb: building package `fink-buildlock-cran-nnet-r30-7.3-8-2' in `/sw/build.build/fink-buildlock-cran-nnet-r30-7.3-8-2_2014.07.27-11.37.36_darwin-x86_64.deb'. Installing build-lock package... /sw/bin/dpkg-lockwait -i /sw/build.build/fink-buildlock-cran-nnet-r30-7.3-8-2_2014.07.27-11.37.36_darwin-x86_64.deb Selecting previously deselected package fink-buildlock-cran-nnet-r30-7.3-8-2. (Reading database ... 9300 files and directories currently installed.) Unpacking fink-buildlock-cran-nnet-r30-7.3-8-2 (from .../fink-buildlock-cran-nnet-r30-7.3-8-2_2014.07.27-11.37.36_darwin-x86_64.deb) ... Setting up fink-buildlock-cran-nnet-r30-7.3-8-2 (2014.07.27-11.37.36) ... sudo -u fink-bld [ENV] sh -c /tmp/fink.o8TGg env LANG=C LC_ALL=C /sw/bin/tar --no-same-owner --no-same-permissions -xvf /sw/src/nnet_7.3-8.tar.gz nnet/ nnet/po/ nnet/po/R-fr.po nnet/po/R-de.po nnet/po/R-nnet.pot nnet/po/R-pl.po nnet/po/R-ko.po nnet/inst/ nnet/inst/po/ nnet/inst/po/pl/ nnet/inst/po/pl/LC_MESSAGES/ nnet/inst/po/pl/LC_MESSAGES/R-nnet.mo nnet/inst/po/en@quot/ nnet/inst/po/en@quot/LC_MESSAGES/ nnet/inst/po/en@quot/LC_MESSAGES/R-nnet.mo nnet/inst/po/ko/ nnet/inst/po/ko/LC_MESSAGES/ nnet/inst/po/ko/LC_MESSAGES/R-nnet.mo nnet/inst/po/fr/ nnet/inst/po/fr/LC_MESSAGES/ nnet/inst/po/fr/LC_MESSAGES/R-nnet.mo nnet/inst/po/de/ nnet/inst/po/de/LC_MESSAGES/ nnet/inst/po/de/LC_MESSAGES/R-nnet.mo nnet/inst/CITATION nnet/inst/NEWS nnet/src/ nnet/src/nnet.c nnet/NAMESPACE nnet/R/ nnet/R/vcovmultinom.R nnet/R/nnet.R nnet/R/multinom.R nnet/R/zzz.R nnet/MD5 nnet/DESCRIPTION nnet/man/ nnet/man/which.is.max.Rd nnet/man/multinom.Rd nnet/man/nnet.Hess.Rd nnet/man/class.ind.Rd nnet/man/predict.nnet.Rd nnet/man/nnet.Rd nnet/LICENCE.note sudo -u fink-bld [ENV] sh -c /tmp/fink.mFnTI /tmp/fink.5cMKG #!/bin/sh -ev export TMPDIR=/sw/build.build/cran-nnet-r30-7.3-8-2/nnet/tmp BIN_R=/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/bin/R pushd .. /sw/build.build/cran-nnet-r30-7.3-8-2 /sw/build.build/cran-nnet-r30-7.3-8-2/nnet if [[ 3.0 > 2.15 ]]; then $BIN_R --verbose CMD build --no-build-vignettes nnet else $BIN_R --verbose CMD build --no-vignettes nnet fi WARNING: ignoring environment value of R_HOME * checking for file 'nnet/DESCRIPTION' ... OK * preparing 'nnet': * checking DESCRIPTION meta-information ... OK * cleaning src * checking for LF line-endings in source and make files * checking for empty or unneeded directories * building 'nnet_7.3-8.tar.gz' /bin/rm -rf /sw/build.build/root-cran-nnet-r30-7.3-8-2 /bin/mkdir -p /sw/build.build/root-cran-nnet-r30-7.3-8-2/sw /bin/mkdir -p /sw/build.build/root-cran-nnet-r30-7.3-8-2/DEBIAN /usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-cran-nnet-r30-7.3-8-2 sudo -u fink-bld [ENV] sh -c /tmp/fink.f15BL /tmp/fink.lHqFB #!/bin/sh -ev BIN_R=/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/bin/R mkdir -p /sw/build.build/root-cran-nnet-r30-7.3-8-2/sw/lib/R/3.0/site-library pushd /sw/build.build/cran-nnet-r30-7.3-8-2/nnet/.. && $BIN_R --verbose CMD install --library=/sw/build.build/root-cran-nnet-r30-7.3-8-2/sw/lib/R/3.0/site-library nnet /sw/build.build/cran-nnet-r30-7.3-8-2 /sw/build.build/cran-nnet-r30-7.3-8-2/nnet WARNING: ignoring environment value of R_HOME * installing *source* package 'nnet' ... ** package 'nnet' successfully unpacked and MD5 sums checked ** libs flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/include -DNDEBUG -I/sw/include -fPIC -g -O3 -c nnet.c -o nnet.o flag-sort -r gcc -ffor-scope -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/sw/lib -o nnet.dylib nnet.o -L/sw/Library/Frameworks/R.framework/Versions/3.0/Resources/lib -lR -lintl -Wl,-framework -Wl,CoreFoundation installing to /sw/build.build/root-cran-nnet-r30-7.3-8-2/sw/lib/R/3.0/site-library/nnet/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (nnet) install_name_tool -id /sw/lib/R/3.0/site-library/nnet/libs/nnet.dylib /sw/build.build/root-cran-nnet-r30-7.3-8-2/sw/lib/R/3.0/site-library/nnet/libs/nnet.dylib sudo -u fink-bld [ENV] sh -c /tmp/fink.4VYvG /bin/rm -f /sw/build.build/root-cran-nnet-r30-7.3-8-2/sw/info/dir /sw/build.build/root-cran-nnet-r30-7.3-8-2/sw/info/dir.old /sw/build.build/root-cran-nnet-r30-7.3-8-2/sw/share/info/dir /sw/build.build/root-cran-nnet-r30-7.3-8-2/sw/share/info/dir.old Reverting ownership of install dir to root Writing control file... Creating shlibs files... Writing md5sums file... env LANG=C LC_ALL=C dpkg-deb -b root-cran-nnet-r30-7.3-8-2 /sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods dpkg-deb: building package `cran-nnet-r30' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods/cran-nnet-r30_7.3-8-2_darwin-x86_64.deb'. Removing runtime build-lock... Removing build-lock package... /sw/bin/dpkg-lockwait -r fink-buildlock-cran-nnet-r30-7.3-8-2 (Reading database ... 9301 files and directories currently installed.) Removing fink-buildlock-cran-nnet-r30-7.3-8-2 ...