printf '

' | fink --no-use-binary-dist --yes  --build-as-nobody rebuild cran-rgdal-r31 2>&1
The package 'cran-rgdal-r31' will be built without being installed.
Reading build dependency for cran-rgdal-r31-0.8-16-2...
Reading dependency for cran-rgdal-r31-0.8-16-2...
Reading build conflict for cran-rgdal-r31-0.8-16-2...
The package 'r-base31-dev' will be installed.
Reading dependency for r-base31-dev-3.1.1-2...
Reading runtime dependency for r-base31-dev-3.1.1-2...
The package 'cran-sp-r31-dev' will be installed.
Reading dependency for cran-sp-r31-dev-1.0-15-2...
Reading runtime dependency for cran-sp-r31-dev-1.0-15-2...
The package 'gdal-dev' will be installed.
Reading dependency for gdal-dev-1.11.0-2...
Reading runtime dependency for gdal-dev-1.11.0-2...
The package 'gdal' will be installed.
Reading dependency for gdal-1.11.0-2...
Reading runtime dependency for gdal-1.11.0-2...
The package 'libgettext8-dev' will be installed.
Reading dependency for libgettext8-dev-0.18.3.1-2...
Reading runtime dependency for libgettext8-dev-0.18.3.1-2...
The package 'proj' will be installed.
Reading dependency for proj-4.8.0-3...
Reading runtime dependency for proj-4.8.0-3...
The package 'r-base31' will be installed.
Reading dependency for r-base31-3.1.1-2...
Reading runtime dependency for r-base31-3.1.1-2...
The package 'cran-sp-r31' will be installed.
Reading dependency for cran-sp-r31-1.0-15-2...
Reading runtime dependency for cran-sp-r31-1.0-15-2...
The package 'gdal-shlibs' will be installed.
Reading dependency for gdal-shlibs-1.11.0-2...
Reading runtime dependency for gdal-shlibs-1.11.0-2...

fink needs help picking an alternative to satisfy a virtual dependency. The
candidates:

(1)	unixodbc2-shlibs: ODBC 3 connectivity for Unix
(2)	unixodbc2-nox-shlibs: ODBC 3 connectivity for Unix

Pick one: [1] (assuming default)
The package 'libspatialite5-shlibs' will be installed.
Reading dependency for libspatialite5-shlibs-4.1.1-1...
Reading runtime dependency for libspatialite5-shlibs-4.1.1-1...
The package 'proj-shlibs' will be installed.
Reading dependency for proj-shlibs-4.8.0-3...
Reading runtime dependency for proj-shlibs-4.8.0-3...
The package 'r-base31-shlibs' will be installed.
Reading dependency for r-base31-shlibs-3.1.1-2...
Reading runtime dependency for r-base31-shlibs-3.1.1-2...
The package 'gettext-bin' will be installed.
Reading dependency for gettext-bin-0.18.3.1-2...
Reading runtime dependency for gettext-bin-0.18.3.1-2...
The package 'flag-sort' will be installed.
Reading dependency for flag-sort-0.5-1...
Reading runtime dependency for flag-sort-0.5-1...
The package 'libjpeg9-shlibs' will be installed.
Reading dependency for libjpeg9-shlibs-9a-1...
Reading runtime dependency for libjpeg9-shlibs-9a-1...
The package 'libjasper.1-shlibs' will be installed.
Reading dependency for libjasper.1-shlibs-1.900.1-5...
Reading runtime dependency for libjasper.1-shlibs-1.900.1-5...
The package 'libpng16-shlibs' will be installed.
Reading dependency for libpng16-shlibs-1.6.12-1...
Reading runtime dependency for libpng16-shlibs-1.6.12-1...
The package 'libtiff5-shlibs' will be installed.
Reading dependency for libtiff5-shlibs-4.0.3-5...
Reading runtime dependency for libtiff5-shlibs-4.0.3-5...
The package 'giflib-shlibs' will be installed.
Reading dependency for giflib-shlibs-4.1.6-103...
Reading runtime dependency for giflib-shlibs-4.1.6-103...
The package 'szip-shlibs' will be installed.
Reading dependency for szip-shlibs-2.1-3...
Reading runtime dependency for szip-shlibs-2.1-3...
The package 'netcdf-c7-shlibs' will be installed.
Reading dependency for netcdf-c7-shlibs-4.3.2-2...
Reading runtime dependency for netcdf-c7-shlibs-4.3.2-2...
The package 'hdf5.8-shlibs' will be installed.
Reading dependency for hdf5.8-shlibs-1.8.13-1...
Reading runtime dependency for hdf5.8-shlibs-1.8.13-1...
The package 'libdap11-shlibs' will be installed.
Reading dependency for libdap11-shlibs-3.11.7-1...
Reading runtime dependency for libdap11-shlibs-3.11.7-1...
The package 'libogdi3-shlibs' will be installed.
Reading dependency for libogdi3-shlibs-3.1.5-1007...
Reading runtime dependency for libogdi3-shlibs-3.1.5-1007...
The package 'libgeos3.4.2-shlibs' will be installed.
Reading dependency for libgeos3.4.2-shlibs-3.4.2-1...
Reading runtime dependency for libgeos3.4.2-shlibs-3.4.2-1...
The package 'libpcre1-shlibs' will be installed.
Reading dependency for libpcre1-shlibs-8.35-1...
Reading runtime dependency for libpcre1-shlibs-8.35-1...
The package 'libcurl4-shlibs' will be installed.
Reading dependency for libcurl4-shlibs-7.37.1-1+10.8...
Reading runtime dependency for libcurl4-shlibs-7.37.1-1+10.8...
The package 'expat1-shlibs' will be installed.
Reading dependency for expat1-shlibs-2.1.0-1...
Reading runtime dependency for expat1-shlibs-2.1.0-1...
The package 'libxml2-shlibs' will be installed.
Reading dependency for libxml2-shlibs-2.9.1-3...
Reading runtime dependency for libxml2-shlibs-2.9.1-3...
The package 'liblzma5-shlibs' will be installed.
Reading dependency for liblzma5-shlibs-5.0.5-2...
Reading runtime dependency for liblzma5-shlibs-5.0.5-2...
The package 'libwebp5-shlibs' will be installed.
Reading dependency for libwebp5-shlibs-0.4.0-1...
Reading runtime dependency for libwebp5-shlibs-0.4.0-1...
The package 'xerces-c31-shlibs' will be installed.
Reading dependency for xerces-c31-shlibs-3.1.0-2...
Reading runtime dependency for xerces-c31-shlibs-3.1.0-2...
The package 'sqlite3-shlibs' will be installed.
Reading dependency for sqlite3-shlibs-3.8.3.1-1...
Reading runtime dependency for sqlite3-shlibs-3.8.3.1-1...
The package 'unixodbc2-shlibs' will be installed.
Reading dependency for unixodbc2-shlibs-2.2.12-7...
Reading runtime dependency for unixodbc2-shlibs-2.2.12-7...
The package 'libfreexl1-shlibs' will be installed.
Reading dependency for libfreexl1-shlibs-1.0.0g-2...
Reading runtime dependency for libfreexl1-shlibs-1.0.0g-2...
The package 'cairo-shlibs' will be installed.
Reading dependency for cairo-shlibs-1.12.14-1...
Reading runtime dependency for cairo-shlibs-1.12.14-1...
The package 'gcc49-shlibs' will be installed.
Reading dependency for gcc49-shlibs-4.9.1-1000...
Reading runtime dependency for gcc49-shlibs-4.9.1-1000...
The package 'glib2-shlibs' will be installed.
Reading dependency for glib2-shlibs-2.22.4-8...
Reading runtime dependency for glib2-shlibs-2.22.4-8...
The package 'libicu48-shlibs' will be installed.
Reading dependency for libicu48-shlibs-4.8.1.1-2...
Reading runtime dependency for libicu48-shlibs-4.8.1.1-2...
The package 'pango1-xft2-ft219-shlibs' will be installed.
Reading dependency for pango1-xft2-ft219-shlibs-1.24.5-9...
Reading runtime dependency for pango1-xft2-ft219-shlibs-1.24.5-9...
The package 'readline6-shlibs' will be installed.
Reading dependency for readline6-shlibs-6.3.6-1...
Reading runtime dependency for readline6-shlibs-6.3.6-1...
The package 'tcltk' will be installed.
Reading dependency for tcltk-8.6.1-104...
Reading runtime dependency for tcltk-8.6.1-104...
The package 'libjbig-shlibs' will be installed.
Reading dependency for libjbig-shlibs-2.0-1...
Reading runtime dependency for libjbig-shlibs-2.0-1...
The package 'librtmp-shlibs' will be installed.
Reading dependency for librtmp-shlibs-2.3-4...
Reading runtime dependency for librtmp-shlibs-2.3-4...
The package 'libssh2.1-shlibs' will be installed.
Reading dependency for libssh2.1-shlibs-1.4.3-1...
Reading runtime dependency for libssh2.1-shlibs-1.4.3-1...
The package 'fontconfig2-shlibs' will be installed.
Reading dependency for fontconfig2-shlibs-2.10.2-1...
Reading runtime dependency for fontconfig2-shlibs-2.10.2-1...
The package 'freetype219-shlibs' will be installed.
Reading dependency for freetype219-shlibs-2.4.12-1...
Reading runtime dependency for freetype219-shlibs-2.4.12-1...
The package 'pixman-shlibs' will be installed.
Reading dependency for pixman-shlibs-0.32.4-1...
Reading runtime dependency for pixman-shlibs-0.32.4-1...
The package 'xdg-base' will be installed.
Reading dependency for xdg-base-0.8-2...
Reading runtime dependency for xdg-base-0.8-2...
The package 'libthai-shlibs' will be installed.
Reading dependency for libthai-shlibs-0.1.20-1...
Reading runtime dependency for libthai-shlibs-0.1.20-1...
The package 'xft2-shlibs' will be installed.
Reading dependency for xft2-shlibs-2.2.0-3...
Reading runtime dependency for xft2-shlibs-2.2.0-3...
The package 'tcltk-shlibs' will be installed.
Reading dependency for tcltk-shlibs-8.6.1-104...
Reading runtime dependency for tcltk-shlibs-8.6.1-104...
The package 'openssl100-shlibs' will be installed.
Reading dependency for openssl100-shlibs-1.0.1h-1...
Reading runtime dependency for openssl100-shlibs-1.0.1h-1...
The package 'fontconfig-config' will be installed.
Reading dependency for fontconfig-config-2.10.2-1...
Reading runtime dependency for fontconfig-config-2.10.2-1...
The package 'libdatrie1-shlibs' will be installed.
Reading dependency for libdatrie1-shlibs-0.2.8-2...
Reading runtime dependency for libdatrie1-shlibs-0.2.8-2...
The package 'libthai' will be installed.
Reading dependency for libthai-0.1.20-1...
Reading runtime dependency for libthai-0.1.20-1...
The following package will be rebuilt:
 cran-rgdal-r31
The following 56 additional packages will be installed:
 cairo-shlibs cran-sp-r31 cran-sp-r31-dev expat1-shlibs flag-sort
 fontconfig-config fontconfig2-shlibs freetype219-shlibs gcc49-shlibs gdal
 gdal-dev gdal-shlibs gettext-bin giflib-shlibs glib2-shlibs hdf5.8-shlibs
 libcurl4-shlibs libdap11-shlibs libdatrie1-shlibs libfreexl1-shlibs
 libgeos3.4.2-shlibs libgettext8-dev libicu48-shlibs libjasper.1-shlibs
 libjbig-shlibs libjpeg9-shlibs liblzma5-shlibs libogdi3-shlibs
 libpcre1-shlibs libpng16-shlibs librtmp-shlibs libspatialite5-shlibs
 libssh2.1-shlibs libthai libthai-shlibs libtiff5-shlibs libwebp5-shlibs
 libxml2-shlibs netcdf-c7-shlibs openssl100-shlibs pango1-xft2-ft219-shlibs
 pixman-shlibs proj proj-shlibs r-base31 r-base31-dev r-base31-shlibs
 readline6-shlibs sqlite3-shlibs szip-shlibs tcltk tcltk-shlibs
 unixodbc2-shlibs xdg-base xerces-c31-shlibs xft2-shlibs
Do you want to continue? [Y/n] (assuming default)
curl --connect-timeout 30 -f -L -A 'fink/0.37.0' -O http://distfiles.master.finkmirrors.net/distfiles/rgdal_0.8-16.tar.gz
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                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 16 1578k   16  252k    0     0   317k      0  0:00:04 --:--:--  0:00:04  317k
 37 1578k   37  589k    0     0   325k      0  0:00:04  0:00:01  0:00:03  325k
 73 1578k   73 1164k    0     0   413k      0  0:00:03  0:00:02  0:00:01  413k
100 1578k  100 1578k    0     0   483k      0  0:00:03  0:00:03 --:--:--  483k
Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/base/expat1-shlibs_2.1.0-1_darwin-x86_64.deb
Selecting previously deselected package expat1-shlibs.
(Reading database ... 4296 files and directories currently installed.)
Unpacking expat1-shlibs (from .../expat1-shlibs_2.1.0-1_darwin-x86_64.deb) ...
Setting up expat1-shlibs (2.1.0-1) ...

Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/debs/flag-sort_0.5-1_darwin-x86_64.deb
Selecting previously deselected package flag-sort.
(Reading database ... 4301 files and directories currently installed.)
Unpacking flag-sort (from .../flag-sort_0.5-1_darwin-x86_64.deb) ...
Setting up flag-sort (0.5-1) ...

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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/freetype219-shlibs_2.4.12-1_darwin-x86_64.deb
Selecting previously deselected package freetype219-shlibs.
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Unpacking freetype219-shlibs (from .../freetype219-shlibs_2.4.12-1_darwin-x86_64.deb) ...
Setting up freetype219-shlibs (2.4.12-1) ...

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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/gcc49-shlibs_4.9.1-1000_darwin-x86_64.deb
Selecting previously deselected package gcc49-shlibs.
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Clearing dependency_libs of .la files being installed

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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/giflib-shlibs_4.1.6-103_darwin-x86_64.deb
Selecting previously deselected package giflib-shlibs.
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libdatrie1-shlibs_0.2.8-2_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/debs/libfreexl1-shlibs_1.0.0g-2_darwin-x86_64.deb
Selecting previously deselected package libfreexl1-shlibs.
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libgeos3.4.2-shlibs_3.4.2-1_darwin-x86_64.deb
Selecting previously deselected package libgeos3.4.2-shlibs.
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Setting up libgeos3.4.2-shlibs (3.4.2-1) ...

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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/base/libgettext8-dev_0.18.3.1-2_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/base/gettext-bin_0.18.3.1-2_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/libjbig-shlibs_2.0-1_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/libjpeg9-shlibs_9a-1_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/utils/liblzma5-shlibs_5.0.5-2_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libpcre1-shlibs_8.35-1_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/libpng16-shlibs_1.6.12-1_darwin-x86_64.deb
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Setting runtime build-lock...
dpkg-deb -b /sw/build.build/root-fink-buildlock-cran-rgdal-r31-0.8-16-2 /sw/build.build
dpkg-deb: building package `fink-buildlock-cran-rgdal-r31-0.8-16-2' in `/sw/build.build/fink-buildlock-cran-rgdal-r31-0.8-16-2_2014.07.29-00.20.09_darwin-x86_64.deb'.
Installing build-lock package...
/sw/bin/dpkg-lockwait -i /sw/build.build/fink-buildlock-cran-rgdal-r31-0.8-16-2_2014.07.29-00.20.09_darwin-x86_64.deb
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Setting up fink-buildlock-cran-rgdal-r31-0.8-16-2 (2014.07.29-00.20.09) ...

sudo -u fink-bld [ENV] sh -c /tmp/fink.kb9tX
env LANG=C LC_ALL=C /sw/bin/tar  --no-same-owner --no-same-permissions -xvf /sw/src/rgdal_0.8-16.tar.gz
rgdal/
rgdal/inst/
rgdal/inst/SVN_VERSION
rgdal/inst/pictures/
rgdal/inst/pictures/scaleoffset.vrt
rgdal/inst/pictures/big_int_arc_file.asc
rgdal/inst/pictures/test_envi_class.hdr
rgdal/inst/pictures/test_envi_class.envi
rgdal/inst/pictures/erdas_spnad83.tif
rgdal/inst/pictures/logo.jpg
rgdal/inst/pictures/Rlogo.jpg
rgdal/inst/pictures/SP27GTIF.TIF
rgdal/inst/pictures/scaleoffset.dat
rgdal/inst/pictures/SOURCES
rgdal/inst/pictures/cea.tif
rgdal/inst/README
rgdal/inst/OSGeo4W_test
rgdal/inst/ChangeLog
rgdal/inst/README.windows
rgdal/inst/doc/
rgdal/inst/doc/OGR_shape_encoding.R
rgdal/inst/doc/OGR_shape_encoding.Rnw
rgdal/inst/doc/OGR_shape_encoding.pdf
rgdal/inst/etc/
rgdal/inst/etc/point.cpg
rgdal/inst/etc/point.shx
rgdal/inst/etc/point.shp
rgdal/inst/etc/point_WinCRAN.RData
rgdal/inst/etc/point.dbf
rgdal/inst/etc/point.prj
rgdal/inst/etc/point_LinuxGDAL.RData
rgdal/inst/vectors/
rgdal/inst/vectors/trin_inca_pl03.dbf
rgdal/inst/vectors/kiritimati_primary_roads.shx
rgdal/inst/vectors/Up.ind
rgdal/inst/vectors/kiritimati_primary_roads.sbn
rgdal/inst/vectors/Up.tab
rgdal/inst/vectors/airports.gml
rgdal/inst/vectors/Up.id
rgdal/inst/vectors/cities.sbn
rgdal/inst/vectors/scot_BNG.shx
rgdal/inst/vectors/test_trk2.gpx
rgdal/inst/vectors/ps_cant_31.MIF
rgdal/inst/vectors/trin_inca_pl03.shx
rgdal/inst/vectors/ps_cant_31.MID
rgdal/inst/vectors/cities.sbx
rgdal/inst/vectors/Up.map
rgdal/inst/vectors/kiritimati_primary_roads.prj
rgdal/inst/vectors/cities.htm
rgdal/inst/vectors/kiritimati_primary_roads.sbx
rgdal/inst/vectors/scot_BNG.shp
rgdal/inst/vectors/kiritimati_primary_roads.shp
rgdal/inst/vectors/cities.prj
rgdal/inst/vectors/trin_inca_pl03.shp
rgdal/inst/vectors/SOURCES
rgdal/inst/vectors/scot_BNG.dbf
rgdal/inst/vectors/cities.dbf
rgdal/inst/vectors/kiritimati_primary_roads.dbf
rgdal/inst/vectors/cities.shx
rgdal/inst/vectors/cities.shp
rgdal/inst/vectors/scot_BNG.prj
rgdal/inst/vectors/Up.dat
rgdal/configure.ac
rgdal/tests/
rgdal/tests/test_proj.Rout.save
rgdal/tests/test_proj.R
rgdal/tests/tests.Rout.save
rgdal/tests/tests.R
rgdal/src/
rgdal/src/local_stubs.c
rgdal/src/rgdal.h
rgdal/src/projectit.cpp
rgdal/src/gdal-bindings.cpp
rgdal/src/ogrsource.cpp
rgdal/src/Makevars.in
rgdal/src/ogrdrivers.cpp
rgdal/src/RGDAL.def
rgdal/src/ogr_geom.cpp
rgdal/src/ogr_proj.cpp
rgdal/src/OGR_write.cpp
rgdal/src/Makevars.win
rgdal/src/init.c
rgdal/src/ogr_polygons.c
rgdal/NAMESPACE
rgdal/data/
rgdal/data/nor2k.rda
rgdal/R/
rgdal/R/Class-CRSx.R
rgdal/R/project.R
rgdal/R/gdal.R
rgdal/R/ogr.R
rgdal/R/ogr_sp.R
rgdal/R/ogr_write.R
rgdal/R/make_EPSG.R
rgdal/R/wrappers.R
rgdal/R/SGDF2RGB.R
rgdal/R/sp_gdal.R
rgdal/R/sgdf_gdal.R
rgdal/R/zzz.R
rgdal/R/AAA.R
rgdal/R/subs.R
rgdal/R/llgrid.R
rgdal/vignettes/
rgdal/vignettes/OGR_shape_encoding.Rnw
rgdal/MD5
rgdal/build/
rgdal/build/vignette.rds
rgdal/DESCRIPTION
rgdal/configure
rgdal/ChangeLog
rgdal/man/
rgdal/man/spTransform-methods.Rd
rgdal/man/RGB2PCT.Rd
rgdal/man/readGDAL.Rd
rgdal/man/SGDF2PCT.Rd
rgdal/man/GDALDriver-class.Rd
rgdal/man/GDALRasterBand-class.Rd
rgdal/man/projInfo.Rd
rgdal/man/closeDataset-methods.Rd
rgdal/man/showWKT.Rd
rgdal/man/readOGR.Rd
rgdal/man/llgrid.Rd
rgdal/man/SpatialGDAL-class.Rd
rgdal/man/project.Rd
rgdal/man/make_EPSG.Rd
rgdal/man/GDALDataset-class.Rd
rgdal/man/GDALMajorObject-class.Rd
rgdal/man/wrappers.Rd
rgdal/man/nor2k.Rd
rgdal/man/GDALTransientDataset-class.Rd
rgdal/man/CRS-class.Rd
rgdal/man/writeOGR.Rd
rgdal/man/GDALReadOnlyDataset-class.Rd
rgdal/man/GDALReadOnlyDataset-methods.Rd
rgdal/man/displayDataset.Rd
rgdal/configure.win
rgdal/cleanup
sudo -u fink-bld [ENV] sh -c /tmp/fink.lwELk
/tmp/fink.rKU_a
#!/bin/sh -ev
  export TMPDIR=/sw/build.build/cran-rgdal-r31-0.8-16-2/rgdal/tmp
  BIN_R=/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/bin/R
  
  # weird configure workaround.
  perl -pi -e "s|-o proj_conf_test| -I/sw/include -o proj_conf_test|g" configure
  
  pushd ..
/sw/build.build/cran-rgdal-r31-0.8-16-2 /sw/build.build/cran-rgdal-r31-0.8-16-2/rgdal
  if [[ 3.1 > 2.15 ]]; then
    $BIN_R --verbose CMD build --no-build-vignettes rgdal
  else
    $BIN_R --verbose CMD build --no-vignettes rgdal
  fi
* checking for file 'rgdal/DESCRIPTION' ... OK
* preparing 'rgdal':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* running 'cleanup'
* checking vignette meta-information ... OK
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* looking to see if a 'data/datalist' file should be added
* building 'rgdal_0.8-16.tar.gz'

/bin/rm -rf /sw/build.build/root-cran-rgdal-r31-0.8-16-2
/bin/mkdir -p /sw/build.build/root-cran-rgdal-r31-0.8-16-2/sw
/bin/mkdir -p /sw/build.build/root-cran-rgdal-r31-0.8-16-2/DEBIAN
/usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-cran-rgdal-r31-0.8-16-2
sudo -u fink-bld [ENV] sh -c /tmp/fink.oNvvF
/tmp/fink.zMflE
#!/bin/sh -ev
  BIN_R=/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/bin/R
  
  mkdir -p /sw/build.build/root-cran-rgdal-r31-0.8-16-2/sw/lib/R/3.1/site-library
  pushd /sw/build.build/cran-rgdal-r31-0.8-16-2/rgdal/.. && $BIN_R --verbose CMD install --library=/sw/build.build/root-cran-rgdal-r31-0.8-16-2/sw/lib/R/3.1/site-library rgdal
/sw/build.build/cran-rgdal-r31-0.8-16-2 /sw/build.build/cran-rgdal-r31-0.8-16-2/rgdal
* installing *source* package 'rgdal' ...
file 'configure' has the wrong MD5 checksum
configure: CC: flag-sort -r gcc -ffor-scope
configure: CXX: flag-sort -r g++
configure: rgdal: 0.8-15
checking for /usr/bin/svnversion... yes
configure: svn revision: 498
configure: gdal-config: gdal-config
checking gdal-config usability... yes
configure: GDAL: 1.11.0
checking GDAL version >= 1.6.3... yes
checking for gcc... flag-sort -r gcc -ffor-scope
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether flag-sort -r gcc -ffor-scope accepts -g... yes
checking for flag-sort -r gcc -ffor-scope option to accept ISO C89... none needed
checking how to run the C preprocessor... flag-sort -r gcc -ffor-scope -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... rm: conftest.dSYM: is a directory
rm: conftest.dSYM: is a directory
yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking gdal.h usability... yes
checking gdal.h presence... yes
checking for gdal.h... yes
checking gdal: linking with --libs only... yes
checking GDAL: /sw/share/gdal/pcs.csv readable... yes
checking proj_api.h usability... yes
checking proj_api.h presence... yes
checking for proj_api.h... yes
checking for pj_init_plus in -lproj... yes
configure: PROJ.4 version: < 4.8.0
checking PROJ.4: epsg found and readable... yes
checking PROJ.4: conus found and readable... no
Note: proj/conus not found
No support available in PROJ4 for NAD grid datum transformations
If required, consider re-installing from source with the contents
of proj-datumgrid-1.<latest>.zip from http://download.osgeo.org/proj/ in nad/.
configure: Package CPP flags:  -I/sw/include/gdal1
configure: Package LIBS:  -L/sw/lib -lgdal -lproj
configure: creating ./config.status
config.status: creating src/Makevars
** libs
flag-sort -r g++ -I/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/include -DNDEBUG -I/sw/include/gdal1 -I/sw/include -I"/sw/lib/R/3.1/site-library/sp/include"   -fPIC  -g -O3  -c OGR_write.cpp -o OGR_write.o
flag-sort -r g++ -I/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/include -DNDEBUG -I/sw/include/gdal1 -I/sw/include -I"/sw/lib/R/3.1/site-library/sp/include"   -fPIC  -g -O3  -c gdal-bindings.cpp -o gdal-bindings.o
flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/include -DNDEBUG -I/sw/include/gdal1 -I/sw/include -I"/sw/lib/R/3.1/site-library/sp/include"   -fPIC  -g -O3  -c init.c -o init.o
flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/include -DNDEBUG -I/sw/include/gdal1 -I/sw/include -I"/sw/lib/R/3.1/site-library/sp/include"   -fPIC  -g -O3  -c local_stubs.c -o local_stubs.o
flag-sort -r g++ -I/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/include -DNDEBUG -I/sw/include/gdal1 -I/sw/include -I"/sw/lib/R/3.1/site-library/sp/include"   -fPIC  -g -O3  -c ogr_geom.cpp -o ogr_geom.o
flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/include -DNDEBUG -I/sw/include/gdal1 -I/sw/include -I"/sw/lib/R/3.1/site-library/sp/include"   -fPIC  -g -O3  -c ogr_polygons.c -o ogr_polygons.o
flag-sort -r g++ -I/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/include -DNDEBUG -I/sw/include/gdal1 -I/sw/include -I"/sw/lib/R/3.1/site-library/sp/include"   -fPIC  -g -O3  -c ogr_proj.cpp -o ogr_proj.o
flag-sort -r g++ -I/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/include -DNDEBUG -I/sw/include/gdal1 -I/sw/include -I"/sw/lib/R/3.1/site-library/sp/include"   -fPIC  -g -O3  -c ogrdrivers.cpp -o ogrdrivers.o
flag-sort -r g++ -I/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/include -DNDEBUG -I/sw/include/gdal1 -I/sw/include -I"/sw/lib/R/3.1/site-library/sp/include"   -fPIC  -g -O3  -c ogrsource.cpp -o ogrsource.o
flag-sort -r g++ -I/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/include -DNDEBUG -I/sw/include/gdal1 -I/sw/include -I"/sw/lib/R/3.1/site-library/sp/include"   -fPIC  -g -O3  -c projectit.cpp -o projectit.o
flag-sort -r g++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/sw/lib -o rgdal.dylib OGR_write.o gdal-bindings.o init.o local_stubs.o ogr_geom.o ogr_polygons.o ogr_proj.o ogrdrivers.o ogrsource.o projectit.o -L/sw/lib -lgdal -lproj -L/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/lib -lR -lintl -Wl,-framework -Wl,CoreFoundation
installing to /sw/build.build/root-cran-rgdal-r31-0.8-16-2/sw/lib/R/3.1/site-library/rgdal/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (rgdal)
  install_name_tool -id /sw/lib/R/3.1/site-library/rgdal/libs/rgdal.dylib /sw/build.build/root-cran-rgdal-r31-0.8-16-2/sw/lib/R/3.1/site-library/rgdal/libs/rgdal.dylib
sudo -u fink-bld [ENV] sh -c /tmp/fink.pisOS
/bin/rm -f /sw/build.build/root-cran-rgdal-r31-0.8-16-2/sw/info/dir /sw/build.build/root-cran-rgdal-r31-0.8-16-2/sw/info/dir.old /sw/build.build/root-cran-rgdal-r31-0.8-16-2/sw/share/info/dir /sw/build.build/root-cran-rgdal-r31-0.8-16-2/sw/share/info/dir.old
Reverting ownership of install dir to root
Writing control file...
Creating shlibs files...
Writing md5sums file...
env LANG=C LC_ALL=C dpkg-deb -b root-cran-rgdal-r31-0.8-16-2 /sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods
dpkg-deb: building package `cran-rgdal-r31' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods/cran-rgdal-r31_0.8-16-2_darwin-x86_64.deb'.
Removing runtime build-lock...
Removing build-lock package...
/sw/bin/dpkg-lockwait -r fink-buildlock-cran-rgdal-r31-0.8-16-2
(Reading database ... 7831 files and directories currently installed.)
Removing fink-buildlock-cran-rgdal-r31-0.8-16-2 ...