printf ' ' | fink --no-use-binary-dist --yes --build-as-nobody rebuild cran-rmpfr-r215 2>&1 The package 'cran-rmpfr-r215' will be built without being installed. Reading build dependency for cran-rmpfr-r215-0.5-4-1... Reading dependency for cran-rmpfr-r215-0.5-4-1... Reading build conflict for cran-rmpfr-r215-0.5-4-1... The package 'r-base215-dev' will be installed. Reading dependency for r-base215-dev-2.15.3-112... Reading runtime dependency for r-base215-dev-2.15.3-112... The package 'gmp5' will be installed. Reading dependency for gmp5-6.0.0a-1... Reading runtime dependency for gmp5-6.0.0a-1... The package 'libgettext8-dev' will be installed. Reading dependency for libgettext8-dev-0.18.3.1-2... Reading runtime dependency for libgettext8-dev-0.18.3.1-2... The package 'libmpfr4' will be installed. Reading dependency for libmpfr4-3.1.2-1... Reading runtime dependency for libmpfr4-3.1.2-1... The package 'r-base215' will be installed. Reading dependency for r-base215-2.15.3-112... Reading runtime dependency for r-base215-2.15.3-112... The package 'cran-gmp-r215' will be installed. Reading dependency for cran-gmp-r215-0.5-11-1... Reading runtime dependency for cran-gmp-r215-0.5-11-1... The package 'gmp5-shlibs' will be installed. Reading dependency for gmp5-shlibs-6.0.0a-1... Reading runtime dependency for gmp5-shlibs-6.0.0a-1... The package 'libmpfr4-shlibs' will be installed. Reading dependency for libmpfr4-shlibs-3.1.2-1... Reading runtime dependency for libmpfr4-shlibs-3.1.2-1... The package 'r-base215-shlibs' will be installed. Reading dependency for r-base215-shlibs-2.15.3-112... Reading runtime dependency for r-base215-shlibs-2.15.3-112... The package 'libgmpxx5-shlibs' will be installed. Reading dependency for libgmpxx5-shlibs-6.0.0a-1... Reading runtime dependency for libgmpxx5-shlibs-6.0.0a-1... The package 'gettext-bin' will be installed. Reading dependency for gettext-bin-0.18.3.1-2... Reading runtime dependency for gettext-bin-0.18.3.1-2... The package 'flag-sort' will be installed. Reading dependency for flag-sort-0.5-1... Reading runtime dependency for flag-sort-0.5-1... The package 'cairo-shlibs' will be installed. Reading dependency for cairo-shlibs-1.12.14-1... Reading runtime dependency for cairo-shlibs-1.12.14-1... The package 'gcc49-shlibs' will be installed. Reading dependency for gcc49-shlibs-4.9.1-1000... Reading runtime dependency for gcc49-shlibs-4.9.1-1000... The package 'glib2-shlibs' will be installed. Reading dependency for glib2-shlibs-2.22.4-8... Reading runtime dependency for glib2-shlibs-2.22.4-8... The package 'libicu48-shlibs' will be installed. Reading dependency for libicu48-shlibs-4.8.1.1-2... Reading runtime dependency for libicu48-shlibs-4.8.1.1-2... The package 'libjpeg9-shlibs' will be installed. Reading dependency for libjpeg9-shlibs-9a-1... Reading runtime dependency for libjpeg9-shlibs-9a-1... The package 'liblzma5-shlibs' will be installed. Reading dependency for liblzma5-shlibs-5.0.5-2... Reading runtime dependency for liblzma5-shlibs-5.0.5-2... The package 'libpng16-shlibs' will be installed. Reading dependency for libpng16-shlibs-1.6.12-1... Reading runtime dependency for libpng16-shlibs-1.6.12-1... The package 'libtiff5-shlibs' will be installed. Reading dependency for libtiff5-shlibs-4.0.3-5... Reading runtime dependency for libtiff5-shlibs-4.0.3-5... The package 'pango1-xft2-ft219-shlibs' will be installed. Reading dependency for pango1-xft2-ft219-shlibs-1.24.5-9... Reading runtime dependency for pango1-xft2-ft219-shlibs-1.24.5-9... The package 'libpcre1-shlibs' will be installed. Reading dependency for libpcre1-shlibs-8.35-1... Reading runtime dependency for libpcre1-shlibs-8.35-1... The package 'readline6-shlibs' will be installed. Reading dependency for readline6-shlibs-6.3.6-1... Reading runtime dependency for readline6-shlibs-6.3.6-1... The package 'tcltk' will be installed. Reading dependency for tcltk-8.6.1-104... Reading runtime dependency for tcltk-8.6.1-104... The package 'fontconfig2-shlibs' will be installed. Reading dependency for fontconfig2-shlibs-2.10.2-1... Reading runtime dependency for fontconfig2-shlibs-2.10.2-1... The package 'freetype219-shlibs' will be installed. Reading dependency for freetype219-shlibs-2.4.12-1... Reading runtime dependency for freetype219-shlibs-2.4.12-1... The package 'pixman-shlibs' will be installed. Reading dependency for pixman-shlibs-0.32.4-1... Reading runtime dependency for pixman-shlibs-0.32.4-1... The package 'xdg-base' will be installed. Reading dependency for xdg-base-0.8-2... Reading runtime dependency for xdg-base-0.8-2... The package 'libjbig-shlibs' will be installed. Reading dependency for libjbig-shlibs-2.0-1... Reading runtime dependency for libjbig-shlibs-2.0-1... The package 'libthai-shlibs' will be installed. Reading dependency for libthai-shlibs-0.1.20-1... Reading runtime dependency for libthai-shlibs-0.1.20-1... The package 'xft2-shlibs' will be installed. Reading dependency for xft2-shlibs-2.2.0-3... Reading runtime dependency for xft2-shlibs-2.2.0-3... The package 'tcltk-shlibs' will be installed. Reading dependency for tcltk-shlibs-8.6.1-104... Reading runtime dependency for tcltk-shlibs-8.6.1-104... The package 'fontconfig-config' will be installed. Reading dependency for fontconfig-config-2.10.2-1... Reading runtime dependency for fontconfig-config-2.10.2-1... The package 'expat1-shlibs' will be installed. Reading dependency for expat1-shlibs-2.1.0-1... Reading runtime dependency for expat1-shlibs-2.1.0-1... The package 'libdatrie1-shlibs' will be installed. Reading dependency for libdatrie1-shlibs-0.2.8-2... Reading runtime dependency for libdatrie1-shlibs-0.2.8-2... The package 'libthai' will be installed. Reading dependency for libthai-0.1.20-1... Reading runtime dependency for libthai-0.1.20-1... The following package will be rebuilt: cran-rmpfr-r215 The following 36 additional packages will be installed: cairo-shlibs cran-gmp-r215 expat1-shlibs flag-sort fontconfig-config fontconfig2-shlibs freetype219-shlibs gcc49-shlibs gettext-bin glib2-shlibs gmp5 gmp5-shlibs libdatrie1-shlibs libgettext8-dev libgmpxx5-shlibs libicu48-shlibs libjbig-shlibs libjpeg9-shlibs liblzma5-shlibs libmpfr4 libmpfr4-shlibs libpcre1-shlibs libpng16-shlibs libthai libthai-shlibs libtiff5-shlibs pango1-xft2-ft219-shlibs pixman-shlibs r-base215 r-base215-dev r-base215-shlibs readline6-shlibs tcltk tcltk-shlibs xdg-base xft2-shlibs Do you want to continue? [Y/n] (assuming default) curl --connect-timeout 30 -f -L -A 'fink/0.37.0' -O http://distfiles.master.finkmirrors.net/distfiles/Rmpfr_0.5-4.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 524k 0 1206 0 0 5513 0 0:01:37 --:--:-- 0:01:37 5506 16 524k 16 88086 0 0 69705 0 0:00:07 0:00:01 0:00:06 69688 100 524k 100 524k 0 0 269k 0 0:00:01 0:00:01 --:--:-- 269k Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/base/expat1-shlibs_2.1.0-1_darwin-x86_64.deb Selecting previously deselected package expat1-shlibs. (Reading database ... 4296 files and directories currently installed.) Unpacking expat1-shlibs (from .../expat1-shlibs_2.1.0-1_darwin-x86_64.deb) ... Setting up expat1-shlibs (2.1.0-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/flag-sort_0.5-1_darwin-x86_64.deb Selecting previously deselected package flag-sort. (Reading database ... 4301 files and directories currently installed.) Unpacking flag-sort (from .../flag-sort_0.5-1_darwin-x86_64.deb) ... Setting up flag-sort (0.5-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/freetype219-shlibs_2.4.12-1_darwin-x86_64.deb Selecting previously deselected package freetype219-shlibs. (Reading database ... 4302 files and directories currently installed.) Unpacking freetype219-shlibs (from .../freetype219-shlibs_2.4.12-1_darwin-x86_64.deb) ... Setting up freetype219-shlibs (2.4.12-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/gcc49-shlibs_4.9.1-1000_darwin-x86_64.deb Selecting previously deselected package gcc49-shlibs. (Reading database ... 4313 files and directories currently installed.) Unpacking gcc49-shlibs (from .../gcc49-shlibs_4.9.1-1000_darwin-x86_64.deb) ... Setting up gcc49-shlibs (4.9.1-1000) ... Clearing dependency_libs of .la files being installed Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/gmp5_6.0.0a-1_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/gmp5-shlibs_6.0.0a-1_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libgmpxx5-shlibs_6.0.0a-1_darwin-x86_64.deb Selecting previously deselected package gmp5. (Reading database ... 4358 files and directories currently installed.) Unpacking gmp5 (from .../gmp5_6.0.0a-1_darwin-x86_64.deb) ... Selecting previously deselected package gmp5-shlibs. Unpacking gmp5-shlibs (from .../gmp5-shlibs_6.0.0a-1_darwin-x86_64.deb) ... Selecting previously deselected package libgmpxx5-shlibs. Unpacking libgmpxx5-shlibs (from .../libgmpxx5-shlibs_6.0.0a-1_darwin-x86_64.deb) ... Setting up gmp5-shlibs (6.0.0a-1) ... Setting up libgmpxx5-shlibs (6.0.0a-1) ... Setting up gmp5 (6.0.0a-1) ... Clearing dependency_libs of .la files being installed * gmp: (gmp). GNU Multiple Precision Arithmetic Library. install-info(/sw/share/info/gmp.info): creating new section `GNU libraries' Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libdatrie1-shlibs_0.2.8-2_darwin-x86_64.deb Selecting previously deselected package libdatrie1-shlibs. (Reading database ... 4408 files and directories currently installed.) Unpacking libdatrie1-shlibs (from .../libdatrie1-shlibs_0.2.8-2_darwin-x86_64.deb) ... Setting up libdatrie1-shlibs (0.2.8-2) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/base/libgettext8-dev_0.18.3.1-2_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/base/gettext-bin_0.18.3.1-2_darwin-x86_64.deb Selecting previously deselected package libgettext8-dev. (Reading database ... 4415 files and directories currently installed.) Unpacking libgettext8-dev (from .../libgettext8-dev_0.18.3.1-2_darwin-x86_64.deb) ... Selecting previously deselected package gettext-bin. Unpacking gettext-bin (from .../gettext-bin_0.18.3.1-2_darwin-x86_64.deb) ... Setting up gettext-bin (0.18.3.1-2) ... Setting up libgettext8-dev (0.18.3.1-2) ... Clearing dependency_libs of .la files being installed Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libicu48-shlibs_4.8.1.1-2_darwin-x86_64.deb Selecting previously deselected package libicu48-shlibs. (Reading database ... 4509 files and directories currently installed.) Unpacking libicu48-shlibs (from .../libicu48-shlibs_4.8.1.1-2_darwin-x86_64.deb) ... Setting up libicu48-shlibs (4.8.1.1-2) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/libjbig-shlibs_2.0-1_darwin-x86_64.deb Selecting previously deselected package libjbig-shlibs. (Reading database ... 4523 files and directories currently installed.) Unpacking libjbig-shlibs (from .../libjbig-shlibs_2.0-1_darwin-x86_64.deb) ... Setting up libjbig-shlibs (2.0-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/libjpeg9-shlibs_9a-1_darwin-x86_64.deb Selecting previously deselected package libjpeg9-shlibs. (Reading database ... 4530 files and directories currently installed.) Unpacking libjpeg9-shlibs (from .../libjpeg9-shlibs_9a-1_darwin-x86_64.deb) ... Setting up libjpeg9-shlibs (9a-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/utils/liblzma5-shlibs_5.0.5-2_darwin-x86_64.deb Selecting previously deselected package liblzma5-shlibs. (Reading database ... 4533 files and directories currently installed.) Unpacking liblzma5-shlibs (from .../liblzma5-shlibs_5.0.5-2_darwin-x86_64.deb) ... Setting up liblzma5-shlibs (5.0.5-2) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/libmpfr4_3.1.2-1_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libmpfr4-shlibs_3.1.2-1_darwin-x86_64.deb Selecting previously deselected package libmpfr4. (Reading database ... 4544 files and directories currently installed.) Unpacking libmpfr4 (from .../libmpfr4_3.1.2-1_darwin-x86_64.deb) ... Selecting previously deselected package libmpfr4-shlibs. Unpacking libmpfr4-shlibs (from .../libmpfr4-shlibs_3.1.2-1_darwin-x86_64.deb) ... Setting up libmpfr4-shlibs (3.1.2-1) ... Setting up libmpfr4 (3.1.2-1) ... Clearing dependency_libs of .la files being installed * mpfr: (mpfr). Multiple Precision Floating-Point Reliable Library. install-info(/sw/share/info/mpfr.info): creating new section `Software libraries' Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libpcre1-shlibs_8.35-1_darwin-x86_64.deb Selecting previously deselected package libpcre1-shlibs. (Reading database ... 4588 files and directories currently installed.) Unpacking libpcre1-shlibs (from .../libpcre1-shlibs_8.35-1_darwin-x86_64.deb) ... Setting up libpcre1-shlibs (8.35-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/libpng16-shlibs_1.6.12-1_darwin-x86_64.deb Selecting previously deselected package libpng16-shlibs. (Reading database ... 4601 files and directories currently installed.) Unpacking libpng16-shlibs (from .../libpng16-shlibs_1.6.12-1_darwin-x86_64.deb) ... Setting up libpng16-shlibs (1.6.12-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libthai-shlibs_0.1.20-1_darwin-x86_64.deb /sw/fink/debs/libthai_0.1.20-1_darwin-x86_64.deb Selecting previously deselected package libthai-shlibs. (Reading database ... 4609 files and directories currently installed.) Unpacking libthai-shlibs (from .../libthai-shlibs_0.1.20-1_darwin-x86_64.deb) ... Selecting previously deselected package libthai. Unpacking libthai (from .../libthai_0.1.20-1_darwin-x86_64.deb) ... Setting up libthai (0.1.20-1) ... Setting up libthai-shlibs (0.1.20-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/libtiff5-shlibs_4.0.3-5_darwin-x86_64.deb Selecting previously deselected package libtiff5-shlibs. (Reading database ... 4624 files and directories currently installed.) Unpacking libtiff5-shlibs (from .../libtiff5-shlibs_4.0.3-5_darwin-x86_64.deb) ... Setting up libtiff5-shlibs (4.0.3-5) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/pixman-shlibs_0.32.4-1_darwin-x86_64.deb Selecting previously deselected package pixman-shlibs. (Reading database ... 4629 files and directories currently installed.) Unpacking pixman-shlibs (from .../pixman-shlibs_0.32.4-1_darwin-x86_64.deb) ... Setting up pixman-shlibs (0.32.4-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/readline6-shlibs_6.3.6-1_darwin-x86_64.deb Selecting previously deselected package readline6-shlibs. (Reading database ... 4633 files and directories currently installed.) Unpacking readline6-shlibs (from .../readline6-shlibs_6.3.6-1_darwin-x86_64.deb) ... Setting up readline6-shlibs (6.3.6-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/xdg-base_0.8-2_darwin-x86_64.deb Selecting previously deselected package xdg-base. (Reading database ... 4644 files and directories currently installed.) Unpacking xdg-base (from .../xdg-base_0.8-2_darwin-x86_64.deb) ... Setting up xdg-base (0.8-2) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/x11/fontconfig2-shlibs_2.10.2-1_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/x11/fontconfig-config_2.10.2-1_darwin-x86_64.deb Selecting previously deselected package fontconfig2-shlibs. (Reading database ... 4646 files and directories currently installed.) Unpacking fontconfig2-shlibs (from .../fontconfig2-shlibs_2.10.2-1_darwin-x86_64.deb) ... Selecting previously deselected package fontconfig-config. Unpacking fontconfig-config (from .../fontconfig-config_2.10.2-1_darwin-x86_64.deb) ... Setting up fontconfig-config (2.10.2-1) ... Setting up fontconfig2-shlibs (2.10.2-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/glib2-shlibs_2.22.4-8_darwin-x86_64.deb Selecting previously deselected package glib2-shlibs. (Reading database ... 4731 files and directories currently installed.) Unpacking glib2-shlibs (from .../glib2-shlibs_2.22.4-8_darwin-x86_64.deb) ... Setting up glib2-shlibs (2.22.4-8) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/x11/xft2-shlibs_2.2.0-3_darwin-x86_64.deb Selecting previously deselected package xft2-shlibs. (Reading database ... 4950 files and directories currently installed.) Unpacking xft2-shlibs (from .../xft2-shlibs_2.2.0-3_darwin-x86_64.deb) ... Setting up xft2-shlibs (2.2.0-3) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/cairo-shlibs_1.12.14-1_darwin-x86_64.deb Selecting previously deselected package cairo-shlibs. (Reading database ... 4959 files and directories currently installed.) Unpacking cairo-shlibs (from .../cairo-shlibs_1.12.14-1_darwin-x86_64.deb) ... Setting up cairo-shlibs (1.12.14-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/gnome/pango1-xft2-ft219-shlibs_1.24.5-9_darwin-x86_64.deb Selecting previously deselected package pango1-xft2-ft219-shlibs. (Reading database ... 4978 files and directories currently installed.) Unpacking pango1-xft2-ft219-shlibs (from .../pango1-xft2-ft219-shlibs_1.24.5-9_darwin-x86_64.deb) ... Setting up pango1-xft2-ft219-shlibs (1.24.5-9) ... Clearing dependency_libs of .la files being installed Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/tcltk_8.6.1-104_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/tcltk-shlibs_8.6.1-104_darwin-x86_64.deb Selecting previously deselected package tcltk. (Reading database ... 5022 files and directories currently installed.) Unpacking tcltk (from .../tcltk_8.6.1-104_darwin-x86_64.deb) ... Selecting previously deselected package tcltk-shlibs. Unpacking tcltk-shlibs (from .../tcltk-shlibs_8.6.1-104_darwin-x86_64.deb) ... Setting up tcltk-shlibs (8.6.1-104) ... Setting up tcltk (8.6.1-104) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/r-base215_2.15.3-112_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base215-shlibs_2.15.3-112_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base215-dev_2.15.3-112_darwin-x86_64.deb Selecting previously deselected package r-base215. (Reading database ... 5498 files and directories currently installed.) Unpacking r-base215 (from .../r-base215_2.15.3-112_darwin-x86_64.deb) ... Selecting previously deselected package r-base215-shlibs. Unpacking r-base215-shlibs (from .../r-base215-shlibs_2.15.3-112_darwin-x86_64.deb) ... Selecting previously deselected package r-base215-dev. Unpacking r-base215-dev (from .../r-base215-dev_2.15.3-112_darwin-x86_64.deb) ... Setting up r-base215-shlibs (2.15.3-112) ... Setting up r-base215-dev (2.15.3-112) ... Setting up r-base215 (2.15.3-112) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/cran-gmp-r215_0.5-11-1_darwin-x86_64.deb Selecting previously deselected package cran-gmp-r215. (Reading database ... 7651 files and directories currently installed.) Unpacking cran-gmp-r215 (from .../cran-gmp-r215_0.5-11-1_darwin-x86_64.deb) ... Setting up cran-gmp-r215 (0.5-11-1) ... Setting runtime build-lock... dpkg-deb -b /sw/build.build/root-fink-buildlock-cran-rmpfr-r215-0.5-4-1 /sw/build.build dpkg-deb: building package `fink-buildlock-cran-rmpfr-r215-0.5-4-1' in `/sw/build.build/fink-buildlock-cran-rmpfr-r215-0.5-4-1_2014.07.29-00.33.01_darwin-x86_64.deb'. Installing build-lock package... /sw/bin/dpkg-lockwait -i /sw/build.build/fink-buildlock-cran-rmpfr-r215-0.5-4-1_2014.07.29-00.33.01_darwin-x86_64.deb Selecting previously deselected package fink-buildlock-cran-rmpfr-r215-0.5-4-1. (Reading database ... 7698 files and directories currently installed.) Unpacking fink-buildlock-cran-rmpfr-r215-0.5-4-1 (from .../fink-buildlock-cran-rmpfr-r215-0.5-4-1_2014.07.29-00.33.01_darwin-x86_64.deb) ... Setting up fink-buildlock-cran-rmpfr-r215-0.5-4-1 (2014.07.29-00.33.01) ... sudo -u fink-bld [ENV] sh -c /tmp/fink.lCT4N env LANG=C LC_ALL=C /sw/bin/tar --no-same-owner --no-same-permissions -xvf /sw/src/Rmpfr_0.5-4.tar.gz Rmpfr/ Rmpfr/TODO Rmpfr/inst/ Rmpfr/inst/doc/ Rmpfr/inst/doc/Rmpfr-pkg.pdf Rmpfr/inst/doc/Maechler_useR_2011-abstr.Rnw Rmpfr/inst/doc/Rmpfr-pkg.Rnw Rmpfr/inst/doc/Rmpfr-pkg.R Rmpfr/inst/doc/Maechler_useR_2011-abstr.R Rmpfr/inst/doc/Maechler_useR_2011-abstr.pdf Rmpfr/inst/doc/log1mexp-note.pdf Rmpfr/inst/doc/log1mexp-note.R Rmpfr/inst/doc/log1mexp-note.Rnw Rmpfr/configure.ac Rmpfr/tests/ Rmpfr/tests/create.R Rmpfr/tests/bit-repr.R Rmpfr/tests/arith-ex.R Rmpfr/tests/special-fun-ex.R Rmpfr/tests/bit-repr.Rout.save Rmpfr/tests/matrix-ex.R Rmpfr/tests/binomial-etc.R Rmpfr/src/ Rmpfr/src/utils.c Rmpfr/src/convert.c Rmpfr/src/Summary.c Rmpfr/src/Rmpfr_utils.h Rmpfr/src/Makevars.in Rmpfr/src/Ops.c Rmpfr/src/Syms.h Rmpfr/src/Makevars.win Rmpfr/src/init.c Rmpfr/NAMESPACE Rmpfr/demo/ Rmpfr/demo/hjkMpfr.R Rmpfr/demo/00Index Rmpfr/R/ Rmpfr/R/AllClasses.R Rmpfr/R/hjk.R Rmpfr/R/Consts.R Rmpfr/R/optimizers.R Rmpfr/R/as.R Rmpfr/R/gmp-convert.R Rmpfr/R/integrate-Romberg.R Rmpfr/R/array.R Rmpfr/R/unirootR.R Rmpfr/R/special-fun.R Rmpfr/R/Math.R Rmpfr/R/mpfr.R Rmpfr/R/Summary.R Rmpfr/R/zzz.R Rmpfr/R/Arith.R Rmpfr/vignettes/ Rmpfr/vignettes/Maechler_useR_2011-abstr.Rnw Rmpfr/vignettes/Rmpfr-pkg.Rnw Rmpfr/vignettes/Rmpfr.bib Rmpfr/vignettes/jsslogo.jpg Rmpfr/vignettes/log1mexp.bib Rmpfr/vignettes/log1mexp-note.Rnw Rmpfr/MD5 Rmpfr/README Rmpfr/build/ Rmpfr/build/vignette.rds Rmpfr/DESCRIPTION Rmpfr/configure Rmpfr/ChangeLog Rmpfr/man/ Rmpfr/man/chooseMpfr.Rd Rmpfr/man/atomicVector-class.Rd Rmpfr/man/str.mpfr.Rd Rmpfr/man/factorialMpfr.Rd Rmpfr/man/sumBinomMpfr.Rd Rmpfr/man/mpfrArray.Rd Rmpfr/man/mpfr-utils.Rd Rmpfr/man/gmp-conversions.Rd Rmpfr/man/hjkMpfr.Rd Rmpfr/man/asNumeric-methods.Rd Rmpfr/man/is.whole.Rd Rmpfr/man/optimizeR.Rd Rmpfr/man/roundMpfr.Rd Rmpfr/man/seqMpfr.Rd Rmpfr/man/integrateR.Rd Rmpfr/man/mpfrMatrix-class.Rd Rmpfr/man/array_or_vector-class.Rd Rmpfr/man/utils.Rd Rmpfr/man/mpfrMatrix-utils.Rd Rmpfr/man/bind-methods.Rd Rmpfr/man/pbetaI.Rd Rmpfr/man/Bernoulli.Rd Rmpfr/man/mpfr-class.Rd Rmpfr/man/mpfr.Rd Rmpfr/man/Bessel_mpfr.Rd Rmpfr/man/formatMpfr.Rd Rmpfr/man/Rmpfr-package.Rd Rmpfr/man/special-math.Rd Rmpfr/man/pmax.Rd Rmpfr/man/Mnumber-class.Rd Rmpfr/man/unirootR.Rd Rmpfr/cleanup Rmpfr/.Rinstignore sudo -u fink-bld [ENV] sh -c /tmp/fink.mk88W /tmp/fink.MR_cA #!/bin/bash -ev export TMPDIR=/sw/build.build/cran-rmpfr-r215-0.5-4-1/Rmpfr/tmp BIN_R=/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R pushd .. /sw/build.build/cran-rmpfr-r215-0.5-4-1 /sw/build.build/cran-rmpfr-r215-0.5-4-1/Rmpfr if [[ 2.15 > 2.15 ]]; then $BIN_R --verbose CMD build --no-build-vignettes Rmpfr else $BIN_R --verbose CMD build --no-vignettes Rmpfr fi * checking for file 'Rmpfr/DESCRIPTION' ... OK * preparing 'Rmpfr': * checking DESCRIPTION meta-information ... OK * cleaning src * running 'cleanup' * checking for LF line-endings in source and make files * checking for empty or unneeded directories * building 'Rmpfr_0.5-4.tar.gz' /bin/rm -rf /sw/build.build/root-cran-rmpfr-r215-0.5-4-1 /bin/mkdir -p /sw/build.build/root-cran-rmpfr-r215-0.5-4-1/sw /bin/mkdir -p /sw/build.build/root-cran-rmpfr-r215-0.5-4-1/DEBIAN /usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-cran-rmpfr-r215-0.5-4-1 sudo -u fink-bld [ENV] sh -c /tmp/fink.cmdul /tmp/fink.Cr3xZ #!/bin/sh -ev BIN_R=/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R mkdir -p /sw/build.build/root-cran-rmpfr-r215-0.5-4-1/sw/lib/R/2.15/site-library pushd /sw/build.build/cran-rmpfr-r215-0.5-4-1/Rmpfr/.. && $BIN_R --verbose CMD install --library=/sw/build.build/root-cran-rmpfr-r215-0.5-4-1/sw/lib/R/2.15/site-library Rmpfr /sw/build.build/cran-rmpfr-r215-0.5-4-1 /sw/build.build/cran-rmpfr-r215-0.5-4-1/Rmpfr * installing *source* package 'Rmpfr' ... ** package 'Rmpfr' successfully unpacked and MD5 sums checked checking for gcc... flag-sort -r gcc -ffor-scope checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether flag-sort -r gcc -ffor-scope accepts -g... yes checking for flag-sort -r gcc -ffor-scope option to accept ISO C89... none needed checking how to run the C preprocessor... flag-sort -r gcc -ffor-scope -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... rm: conftest.dSYM: is a directory rm: conftest.dSYM: is a directory yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking mpfr.h usability... yes checking mpfr.h presence... yes checking for mpfr.h... yes checking gmp.h usability... yes checking gmp.h presence... yes checking for gmp.h... yes checking for __gmpz_init in -lgmp... yes checking for mpfr_init in -lmpfr... yes configure: creating ./config.status config.status: creating src/Makevars ** libs flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -I/sw/include -fPIC -g -O3 -c Ops.c -o Ops.o flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -I/sw/include -fPIC -g -O3 -c Summary.c -o Summary.o flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -I/sw/include -fPIC -g -O3 -c convert.c -o convert.o flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -I/sw/include -fPIC -g -O3 -c init.c -o init.o flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -I/sw/include -fPIC -g -O3 -c utils.c -o utils.o flag-sort -r gcc -ffor-scope -dynamiclib -Wl,-headerpad_max_install_names -single_module -multiply_defined suppress -L/sw/lib -o Rmpfr.dylib Ops.o Summary.o convert.o init.o utils.o -lmpfr -lgmp -L/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/lib -lR -lintl -Wl,-framework -Wl,CoreFoundation installing to /sw/build.build/root-cran-rmpfr-r215-0.5-4-1/sw/lib/R/2.15/site-library/Rmpfr/libs ** R ** demo ** inst ** preparing package for lazy loading Creating a generic function for 'factorial' from package 'base' in package 'Rmpfr' Creating a generic function for 'mean' from package 'base' in package 'Rmpfr' Creating a generic function for 't' from package 'base' in package 'Rmpfr' Creating a generic function for 'aperm' from package 'base' in package 'Rmpfr' Creating a generic function for 'as.vector' from package 'base' in package 'Rmpfr' Creating a generic function for 'crossprod' from package 'gmp' in package 'Rmpfr' Creating a generic function for 'tcrossprod' from package 'gmp' in package 'Rmpfr' Creating a generic function for 'diag' from package 'base' in package 'Rmpfr' Creating a generic function for 'diag<-' from package 'base' in package 'Rmpfr' Creating a new generic function for 'cbind' in package 'Rmpfr' Creating a new generic function for 'rbind' in package 'Rmpfr' Creating a generic function for 'colSums' from package 'base' in package 'Rmpfr' Creating a generic function for 'colMeans' from package 'base' in package 'Rmpfr' Creating a generic function for 'rowSums' from package 'base' in package 'Rmpfr' Creating a generic function for 'rowMeans' from package 'base' in package 'Rmpfr' Creating a generic function for 'format' from package 'base' in package 'Rmpfr' Creating a generic function for 'unique' from package 'base' in package 'Rmpfr' Creating a new generic function for 'pmin' in package 'Rmpfr' Creating a new generic function for 'pmax' in package 'Rmpfr' Creating a generic function for 'all.equal' from package 'base' in package 'Rmpfr' Creating a generic function for 'atan2' from package 'base' in package 'Rmpfr' Creating a generic function for 'beta' from package 'base' in package 'Rmpfr' Creating a generic function for 'lbeta' from package 'base' in package 'Rmpfr' ** help *** installing help indices ** building package indices ** installing vignettes 'Maechler_useR_2011-abstr.Rnw' 'Rmpfr-pkg.Rnw' 'log1mexp-note.Rnw' ** testing if installed package can be loaded Loading C code of R package 'Rmpfr': GMP using 64 bits per limb * DONE (Rmpfr) install_name_tool -id /sw/lib/R/2.15/site-library/Rmpfr/libs/Rmpfr.dylib /sw/build.build/root-cran-rmpfr-r215-0.5-4-1/sw/lib/R/2.15/site-library/Rmpfr/libs/Rmpfr.dylib sudo -u fink-bld [ENV] sh -c /tmp/fink.E_ABS /bin/rm -f /sw/build.build/root-cran-rmpfr-r215-0.5-4-1/sw/info/dir /sw/build.build/root-cran-rmpfr-r215-0.5-4-1/sw/info/dir.old /sw/build.build/root-cran-rmpfr-r215-0.5-4-1/sw/share/info/dir /sw/build.build/root-cran-rmpfr-r215-0.5-4-1/sw/share/info/dir.old Reverting ownership of install dir to root Writing control file... Creating shlibs files... Writing md5sums file... env LANG=C LC_ALL=C dpkg-deb -b root-cran-rmpfr-r215-0.5-4-1 /sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods dpkg-deb: building package `cran-rmpfr-r215' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods/cran-rmpfr-r215_0.5-4-1_darwin-x86_64.deb'. Removing runtime build-lock... Removing build-lock package... /sw/bin/dpkg-lockwait -r fink-buildlock-cran-rmpfr-r215-0.5-4-1 (Reading database ... 7699 files and directories currently installed.) Removing fink-buildlock-cran-rmpfr-r215-0.5-4-1 ...