printf ' ' | fink --no-use-binary-dist --yes --build-as-nobody rebuild cran-vgamdata-r31 2>&1 The package 'cran-vgamdata-r31' will be built without being installed. Reading build dependency for cran-vgamdata-r31-0.9-3-1... Reading dependency for cran-vgamdata-r31-0.9-3-1... Reading build conflict for cran-vgamdata-r31-0.9-3-1... The package 'r-base31-dev' will be installed. Reading dependency for r-base31-dev-3.1.1-2... Reading runtime dependency for r-base31-dev-3.1.1-2... The package 'r-base31' will be installed. Reading dependency for r-base31-3.1.1-2... Reading runtime dependency for r-base31-3.1.1-2... The package 'r-base31-shlibs' will be installed. Reading dependency for r-base31-shlibs-3.1.1-2... Reading runtime dependency for r-base31-shlibs-3.1.1-2... The package 'flag-sort' will be installed. Reading dependency for flag-sort-0.5-1... Reading runtime dependency for flag-sort-0.5-1... The package 'libicu48-shlibs' will be installed. Reading dependency for libicu48-shlibs-4.8.1.1-2... Reading runtime dependency for libicu48-shlibs-4.8.1.1-2... The package 'libpcre1-shlibs' will be installed. Reading dependency for libpcre1-shlibs-8.35-1... Reading runtime dependency for libpcre1-shlibs-8.35-1... The package 'tcltk' will be installed. Reading dependency for tcltk-8.6.1-104... Reading runtime dependency for tcltk-8.6.1-104... The package 'tcltk-shlibs' will be installed. Reading dependency for tcltk-shlibs-8.6.1-104... Reading runtime dependency for tcltk-shlibs-8.6.1-104... The following package will be rebuilt: cran-vgamdata-r31 The following 8 additional packages will be installed: flag-sort libicu48-shlibs libpcre1-shlibs r-base31 r-base31-dev r-base31-shlibs tcltk tcltk-shlibs Do you want to continue? [Y/n] (assuming default) Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/flag-sort_0.5-1_darwin-x86_64.deb Selecting previously deselected package flag-sort. (Reading database ... 26335 files and directories currently installed.) Unpacking flag-sort (from .../flag-sort_0.5-1_darwin-x86_64.deb) ... Setting up flag-sort (0.5-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libicu48-shlibs_4.8.1.1-2_darwin-x86_64.deb Selecting previously deselected package libicu48-shlibs. (Reading database ... 26336 files and directories currently installed.) Unpacking libicu48-shlibs (from .../libicu48-shlibs_4.8.1.1-2_darwin-x86_64.deb) ... Setting up libicu48-shlibs (4.8.1.1-2) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libpcre1-shlibs_8.35-1_darwin-x86_64.deb Selecting previously deselected package libpcre1-shlibs. (Reading database ... 26350 files and directories currently installed.) Unpacking libpcre1-shlibs (from .../libpcre1-shlibs_8.35-1_darwin-x86_64.deb) ... Setting up libpcre1-shlibs (8.35-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/tcltk_8.6.1-104_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/tcltk-shlibs_8.6.1-104_darwin-x86_64.deb Selecting previously deselected package tcltk. (Reading database ... 26363 files and directories currently installed.) Unpacking tcltk (from .../tcltk_8.6.1-104_darwin-x86_64.deb) ... Selecting previously deselected package tcltk-shlibs. Unpacking tcltk-shlibs (from .../tcltk-shlibs_8.6.1-104_darwin-x86_64.deb) ... Setting up tcltk-shlibs (8.6.1-104) ... Setting up tcltk (8.6.1-104) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/r-base31_3.1.1-2_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base31-shlibs_3.1.1-2_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base31-dev_3.1.1-2_darwin-x86_64.deb Selecting previously deselected package r-base31. (Reading database ... 26838 files and directories currently installed.) Unpacking r-base31 (from .../r-base31_3.1.1-2_darwin-x86_64.deb) ... Selecting previously deselected package r-base31-shlibs. Unpacking r-base31-shlibs (from .../r-base31-shlibs_3.1.1-2_darwin-x86_64.deb) ... Selecting previously deselected package r-base31-dev. Unpacking r-base31-dev (from .../r-base31-dev_3.1.1-2_darwin-x86_64.deb) ... Setting up r-base31-shlibs (3.1.1-2) ... Setting up r-base31-dev (3.1.1-2) ... Setting up r-base31 (3.1.1-2) ... Setting runtime build-lock... dpkg-deb -b /sw/build.build/root-fink-buildlock-cran-vgamdata-r31-0.9-3-1 /sw/build.build dpkg-deb: building package `fink-buildlock-cran-vgamdata-r31-0.9-3-1' in `/sw/build.build/fink-buildlock-cran-vgamdata-r31-0.9-3-1_2014.08.01-04.42.29_darwin-x86_64.deb'. Installing build-lock package... /sw/bin/dpkg-lockwait -i /sw/build.build/fink-buildlock-cran-vgamdata-r31-0.9-3-1_2014.08.01-04.42.29_darwin-x86_64.deb Selecting previously deselected package fink-buildlock-cran-vgamdata-r31-0.9-3-1. (Reading database ... 28805 files and directories currently installed.) Unpacking fink-buildlock-cran-vgamdata-r31-0.9-3-1 (from .../fink-buildlock-cran-vgamdata-r31-0.9-3-1_2014.08.01-04.42.29_darwin-x86_64.deb) ... Setting up fink-buildlock-cran-vgamdata-r31-0.9-3-1 (2014.08.01-04.42.29) ... sudo -u fink-bld [ENV] sh -c /tmp/fink.7XuN7 env LANG=C LC_ALL=C /sw/bin/tar --no-same-owner --no-same-permissions -xvf /sw/src/VGAMdata_0.9-3.tar.gz VGAMdata/ VGAMdata/BUGS VGAMdata/inst/ VGAMdata/inst/CITATION VGAMdata/NAMESPACE VGAMdata/demo/ VGAMdata/demo/distributions.R VGAMdata/demo/vgam.R VGAMdata/demo/cqo.R VGAMdata/demo/00Index VGAMdata/demo/zipoisson.R VGAMdata/demo/binom2.or.R VGAMdata/demo/lmsqreg.R VGAMdata/NEWS VGAMdata/data/ VGAMdata/data/xs.nz.rda VGAMdata/data/wffc.nc.rda VGAMdata/data/exam1.rda VGAMdata/data/huse.rda VGAMdata/data/rugby.rda VGAMdata/data/fibre1dot5.rda VGAMdata/data/wffc.teams.rda VGAMdata/data/hued.rda VGAMdata/data/wffc.indiv.rda VGAMdata/data/wffc.rda VGAMdata/data/rainfall.rda VGAMdata/data/bb.de.rda VGAMdata/data/fibre15.rda VGAMdata/data/prison.us.rda VGAMdata/data/ugss.rda VGAMdata/data/huie.rda VGAMdata/data/datalist VGAMdata/data/oly12.rda VGAMdata/data/gala.rda VGAMdata/data/rugby.ties.rda VGAMdata/data/crime.us.rda VGAMdata/data/students.tw.rda VGAMdata/R/ VGAMdata/R/family.fishing.R VGAMdata/MD5 VGAMdata/DESCRIPTION VGAMdata/man/ VGAMdata/man/wffc.indiv.Rd VGAMdata/man/exam1.Rd VGAMdata/man/ugss.Rd VGAMdata/man/students.tw.Rd VGAMdata/man/wffc.teams.Rd VGAMdata/man/xs.nz.Rd VGAMdata/man/bb.de.Rd VGAMdata/man/huie.Rd VGAMdata/man/oly12.Rd VGAMdata/man/wffc.Rd VGAMdata/man/huse.Rd VGAMdata/man/rugby.Rd VGAMdata/man/notdocumentedyet.Rd VGAMdata/man/VGAMdata-package.Rd VGAMdata/man/hued.Rd VGAMdata/man/prison.us.Rd VGAMdata/man/crime.us.Rd VGAMdata/man/DeLury.Rd VGAMdata/man/wffc.P2star.Rd VGAMdata/man/wffc.nc.Rd sudo -u fink-bld [ENV] sh -c /tmp/fink.y7G1G /tmp/fink.WEFqZ #!/bin/bash -ev export TMPDIR=/sw/build.build/cran-vgamdata-r31-0.9-3-1/VGAMdata/tmp BIN_R=/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/bin/R pushd .. /sw/build.build/cran-vgamdata-r31-0.9-3-1 /sw/build.build/cran-vgamdata-r31-0.9-3-1/VGAMdata if [[ 3.1 > 2.15 ]]; then $BIN_R --verbose CMD build --no-build-vignettes VGAMdata else $BIN_R --verbose CMD build --no-vignettes VGAMdata fi * checking for file 'VGAMdata/DESCRIPTION' ... OK * preparing 'VGAMdata': * checking DESCRIPTION meta-information ... OK * checking for LF line-endings in source and make files * checking for empty or unneeded directories * looking to see if a 'data/datalist' file should be added * building 'VGAMdata_0.9-3.tar.gz' /bin/rm -rf /sw/build.build/root-cran-vgamdata-r31-0.9-3-1 /bin/mkdir -p /sw/build.build/root-cran-vgamdata-r31-0.9-3-1/sw /bin/mkdir -p /sw/build.build/root-cran-vgamdata-r31-0.9-3-1/DEBIAN /usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-cran-vgamdata-r31-0.9-3-1 sudo -u fink-bld [ENV] sh -c /tmp/fink.2vXJj /tmp/fink.hS_UC #!/bin/sh -ev BIN_R=/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/bin/R mkdir -p /sw/build.build/root-cran-vgamdata-r31-0.9-3-1/sw/lib/R/3.1/site-library pushd /sw/build.build/cran-vgamdata-r31-0.9-3-1/VGAMdata/.. && $BIN_R --verbose CMD install --library=/sw/build.build/root-cran-vgamdata-r31-0.9-3-1/sw/lib/R/3.1/site-library VGAMdata /sw/build.build/cran-vgamdata-r31-0.9-3-1 /sw/build.build/cran-vgamdata-r31-0.9-3-1/VGAMdata * installing *source* package 'VGAMdata' ... ** package 'VGAMdata' successfully unpacked and MD5 sums checked ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** preparing package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (VGAMdata) sudo -u fink-bld [ENV] sh -c /tmp/fink.A8lQ5 /bin/rm -f /sw/build.build/root-cran-vgamdata-r31-0.9-3-1/sw/info/dir /sw/build.build/root-cran-vgamdata-r31-0.9-3-1/sw/info/dir.old /sw/build.build/root-cran-vgamdata-r31-0.9-3-1/sw/share/info/dir /sw/build.build/root-cran-vgamdata-r31-0.9-3-1/sw/share/info/dir.old Reverting ownership of install dir to root Writing control file... Writing md5sums file... env LANG=C LC_ALL=C dpkg-deb -b root-cran-vgamdata-r31-0.9-3-1 /sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods dpkg-deb: building package `cran-vgamdata-r31' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods/cran-vgamdata-r31_0.9-3-1_darwin-x86_64.deb'. Removing runtime build-lock... Removing build-lock package... /sw/bin/dpkg-lockwait -r fink-buildlock-cran-vgamdata-r31-0.9-3-1 (Reading database ... 28806 files and directories currently installed.) Removing fink-buildlock-cran-vgamdata-r31-0.9-3-1 ...