printf '
' | fink --no-use-binary-dist --yes --build-as-nobody rebuild cran-xml-r215 2>&1
The package 'cran-xml-r215' will be built without being installed.
Reading build dependency for cran-xml-r215-3.98-1.1-1...
Reading dependency for cran-xml-r215-3.98-1.1-1...
Reading build conflict for cran-xml-r215-3.98-1.1-1...
The package 'r-base215-dev' will be installed.
Reading dependency for r-base215-dev-2.15.3-112...
Reading runtime dependency for r-base215-dev-2.15.3-112...
The package 'libiconv-dev' will be installed.
Reading dependency for libiconv-dev-1.14-5...
Reading runtime dependency for libiconv-dev-1.14-5...
The package 'libgettext8-dev' will be installed.
Reading dependency for libgettext8-dev-0.18.3.1-2...
Reading runtime dependency for libgettext8-dev-0.18.3.1-2...
The package 'libxml2' will be installed.
Reading dependency for libxml2-2.9.1-3...
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The package 'r-base215' will be installed.
Reading dependency for r-base215-2.15.3-112...
Reading runtime dependency for r-base215-2.15.3-112...
The package 'libxml2-shlibs' will be installed.
Reading dependency for libxml2-shlibs-2.9.1-3...
Reading runtime dependency for libxml2-shlibs-2.9.1-3...
The package 'r-base215-shlibs' will be installed.
Reading dependency for r-base215-shlibs-2.15.3-112...
Reading runtime dependency for r-base215-shlibs-2.15.3-112...
The package 'gettext-bin' will be installed.
Reading dependency for gettext-bin-0.18.3.1-2...
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The package 'libxml2-bin' will be installed.
Reading dependency for libxml2-bin-2.9.1-3...
Reading runtime dependency for libxml2-bin-2.9.1-3...
The package 'flag-sort' will be installed.
Reading dependency for flag-sort-0.5-1...
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The package 'liblzma5-shlibs' will be installed.
Reading dependency for liblzma5-shlibs-5.0.5-2...
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The package 'cairo-shlibs' will be installed.
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The package 'gcc49-shlibs' will be installed.
Reading dependency for gcc49-shlibs-4.9.1-1000...
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The package 'glib2-shlibs' will be installed.
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The package 'libicu48-shlibs' will be installed.
Reading dependency for libicu48-shlibs-4.8.1.1-2...
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The package 'libjpeg9-shlibs' will be installed.
Reading dependency for libjpeg9-shlibs-9a-1...
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The package 'libpng16-shlibs' will be installed.
Reading dependency for libpng16-shlibs-1.6.12-1...
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The package 'libtiff5-shlibs' will be installed.
Reading dependency for libtiff5-shlibs-4.0.3-5...
Reading runtime dependency for libtiff5-shlibs-4.0.3-5...
The package 'pango1-xft2-ft219-shlibs' will be installed.
Reading dependency for pango1-xft2-ft219-shlibs-1.24.5-9...
Reading runtime dependency for pango1-xft2-ft219-shlibs-1.24.5-9...
The package 'libpcre1-shlibs' will be installed.
Reading dependency for libpcre1-shlibs-8.35-1...
Reading runtime dependency for libpcre1-shlibs-8.35-1...
The package 'readline6-shlibs' will be installed.
Reading dependency for readline6-shlibs-6.3.6-1...
Reading runtime dependency for readline6-shlibs-6.3.6-1...
The package 'tcltk' will be installed.
Reading dependency for tcltk-8.6.1-104...
Reading runtime dependency for tcltk-8.6.1-104...
The package 'fontconfig2-shlibs' will be installed.
Reading dependency for fontconfig2-shlibs-2.10.2-1...
Reading runtime dependency for fontconfig2-shlibs-2.10.2-1...
The package 'freetype219-shlibs' will be installed.
Reading dependency for freetype219-shlibs-2.4.12-1...
Reading runtime dependency for freetype219-shlibs-2.4.12-1...
The package 'pixman-shlibs' will be installed.
Reading dependency for pixman-shlibs-0.32.4-1...
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The package 'xdg-base' will be installed.
Reading dependency for xdg-base-0.8-2...
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The package 'libjbig-shlibs' will be installed.
Reading dependency for libjbig-shlibs-2.0-1...
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The package 'libthai-shlibs' will be installed.
Reading dependency for libthai-shlibs-0.1.20-1...
Reading runtime dependency for libthai-shlibs-0.1.20-1...
The package 'xft2-shlibs' will be installed.
Reading dependency for xft2-shlibs-2.2.0-3...
Reading runtime dependency for xft2-shlibs-2.2.0-3...
The package 'tcltk-shlibs' will be installed.
Reading dependency for tcltk-shlibs-8.6.1-104...
Reading runtime dependency for tcltk-shlibs-8.6.1-104...
The package 'fontconfig-config' will be installed.
Reading dependency for fontconfig-config-2.10.2-1...
Reading runtime dependency for fontconfig-config-2.10.2-1...
The package 'expat1-shlibs' will be installed.
Reading dependency for expat1-shlibs-2.1.0-1...
Reading runtime dependency for expat1-shlibs-2.1.0-1...
The package 'libdatrie1-shlibs' will be installed.
Reading dependency for libdatrie1-shlibs-0.2.8-2...
Reading runtime dependency for libdatrie1-shlibs-0.2.8-2...
The package 'libthai' will be installed.
Reading dependency for libthai-0.1.20-1...
Reading runtime dependency for libthai-0.1.20-1...
The following package will be rebuilt:
cran-xml-r215
The following 34 additional packages will be installed:
cairo-shlibs expat1-shlibs flag-sort fontconfig-config fontconfig2-shlibs
freetype219-shlibs gcc49-shlibs gettext-bin glib2-shlibs libdatrie1-shlibs
libgettext8-dev libiconv-dev libicu48-shlibs libjbig-shlibs libjpeg9-shlibs
liblzma5-shlibs libpcre1-shlibs libpng16-shlibs libthai libthai-shlibs
libtiff5-shlibs libxml2 libxml2-bin libxml2-shlibs pango1-xft2-ft219-shlibs
pixman-shlibs r-base215 r-base215-dev r-base215-shlibs readline6-shlibs
tcltk tcltk-shlibs xdg-base xft2-shlibs
Do you want to continue? [Y/n] (assuming default)
Reading buildlock packages...
All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/base/expat1-shlibs_2.1.0-1_darwin-x86_64.deb
Selecting previously deselected package expat1-shlibs.
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Setting up expat1-shlibs (2.1.0-1) ...
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/sw/bin/dpkg-lockwait -i /sw/fink/debs/flag-sort_0.5-1_darwin-x86_64.deb
Selecting previously deselected package flag-sort.
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Setting up flag-sort (0.5-1) ...
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/freetype219-shlibs_2.4.12-1_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/gcc49-shlibs_4.9.1-1000_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libdatrie1-shlibs_0.2.8-2_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/base/libgettext8-dev_0.18.3.1-2_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/base/gettext-bin_0.18.3.1-2_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/base/libiconv-dev_1.14-5_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libicu48-shlibs_4.8.1.1-2_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/libjbig-shlibs_2.0-1_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/libjpeg9-shlibs_9a-1_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/utils/liblzma5-shlibs_5.0.5-2_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libpcre1-shlibs_8.35-1_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libthai-shlibs_0.1.20-1_darwin-x86_64.deb /sw/fink/debs/libthai_0.1.20-1_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/debs/libtiff5-shlibs_4.0.3-5_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/pixman-shlibs_0.32.4-1_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/readline6-shlibs_6.3.6-1_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/debs/xdg-base_0.8-2_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/x11/fontconfig2-shlibs_2.10.2-1_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/x11/fontconfig-config_2.10.2-1_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/debs/libxml2_2.9.1-3_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libxml2-shlibs_2.9.1-3_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libxml2-bin_2.9.1-3_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/debs/r-base215_2.15.3-112_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base215-shlibs_2.15.3-112_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base215-dev_2.15.3-112_darwin-x86_64.deb
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dpkg-deb -b /sw/build.build/root-fink-buildlock-cran-xml-r215-3.98-1.1-1 /sw/build.build
dpkg-deb: building package `fink-buildlock-cran-xml-r215-3.98-1.1-1' in `/sw/build.build/fink-buildlock-cran-xml-r215-3.98-1.1-1_2014.07.27-12.00.00_darwin-x86_64.deb'.
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Setting up fink-buildlock-cran-xml-r215-3.98-1.1-1 (2014.07.27-12.00.00) ...
sudo -u fink-bld [ENV] sh -c /tmp/fink.KuDDx
env LANG=C LC_ALL=C /sw/bin/tar --no-same-owner --no-same-permissions -xvf /sw/src/XML_3.98-1.1.tar.gz
XML/
XML/MD5
XML/xpathPointer.xml
XML/testRemoveFinalizers.c
XML/testRemoveFinalizers.R
XML/symbols.rds
XML/src/
XML/src/xpath.c
XML/src/xmlsecurity.c
XML/src/schema.c
XML/src/libxmlFeatures.c
XML/src/fixNS.c
XML/src/XMLTree.c
XML/src/XMLHashTree.c
XML/src/XMLEventParse.c
XML/src/Utils.h
XML/src/Utils.c
XML/src/SPlus/
XML/src/SPlus/SUtils.h
XML/src/SPlus/SUtils.c
XML/src/Rcatalog.c
XML/src/RUtils.c
XML/src/RS_XML.h
XML/src/RSDTD.h
XML/src/RSDTD.c
XML/src/RSCommon.h
XML/src/NodeGC.h
XML/src/NodeGC.c
XML/src/Makevars.win
XML/src/Makevars.in
XML/src/HTMLParse.c
XML/src/ExpatParse.h
XML/src/ExpatParse.c
XML/src/EventParse.h
XML/src/EventParse.c
XML/src/DocParse.h
XML/src/DocParse.c
XML/scrapingData.xml
XML/man/
XML/man/xmlValue.Rd
XML/man/xmlTreeParse.Rd
XML/man/xmlTree.Rd
XML/man/xmlToS4.Rd
XML/man/xmlToList.Rd
XML/man/xmlToDataFrame.Rd
XML/man/xmlSubset.Rd
XML/man/xmlStructuredStop.Rd
XML/man/xmlStopParser.Rd
XML/man/xmlSource.Rd
XML/man/xmlSize.Rd
XML/man/xmlSerializeHook.Rd
XML/man/xmlSearchNs.Rd
XML/man/xmlSchemaValidate.Rd
XML/man/xmlRoot.Rd
XML/man/xmlParserContextFunction.Rd
XML/man/xmlParseDoc.Rd
XML/man/xmlParent.Rd
XML/man/xmlOutput.Rd
XML/man/xmlNode.Rd
XML/man/xmlNamespaceDefinitions.Rd
XML/man/xmlNamespace.Rd
XML/man/xmlName.Rd
XML/man/xmlHandler.Rd
XML/man/xmlGetAttr.Rd
XML/man/xmlFlatListTree.Rd
XML/man/xmlEventParse.Rd
XML/man/xmlEventHandler.Rd
XML/man/xmlElementsByTagName.Rd
XML/man/xmlElementSummary.Rd
XML/man/xmlDOMApply.Rd
XML/man/xmlContainsEntity.Rd
XML/man/xmlClone.Rd
XML/man/xmlCleanNamespaces.Rd
XML/man/xmlChildren.Rd
XML/man/xmlAttrs.Rd
XML/man/xmlAttributeType.Rd
XML/man/xmlApply.Rd
XML/man/toString.Rd
XML/man/toHTML.Rd
XML/man/supportsExpat.Rd
XML/man/setXMLNamespace.Rd
XML/man/schema-class.Rd
XML/man/saveXML.Rd
XML/man/removeXMLNamespaces.Rd
XML/man/readSolrDoc.Rd
XML/man/readKeyValueDB.Rd
XML/man/readHTMLTable.Rd
XML/man/readHTMLList.Rd
XML/man/processXInclude.Rd
XML/man/print.Rd
XML/man/parseXMLAndAdd.Rd
XML/man/parseURI.Rd
XML/man/parseDTD.Rd
XML/man/newXMLNamespace.Rd
XML/man/newXMLDoc.Rd
XML/man/names.XMLNode.Rd
XML/man/makeClassTemplate.Rd
XML/man/libxmlVersion.Rd
XML/man/length.XMLNode.Rd
XML/man/isXMLString.Rd
XML/man/getXMLErrors.Rd
XML/man/getXIncludes.Rd
XML/man/getRelativeURL.Rd
XML/man/getNodeSet.Rd
XML/man/getLineNumber.Rd
XML/man/getHTMLLinks.Rd
XML/man/getEncoding.Rd
XML/man/getChildrenStrings.Rd
XML/man/genericSAXHandlers.Rd
XML/man/free.Rd
XML/man/findXInclude.Rd
XML/man/ensureNamespace.Rd
XML/man/dtdValidElement.Rd
XML/man/dtdIsAttribute.Rd
XML/man/dtdElementValidEntry.Rd
XML/man/dtdElement.Rd
XML/man/docName.Rd
XML/man/compareXMLDocs.Rd
XML/man/coerce.Rd
XML/man/catalogs.Rd
XML/man/catalogResolve.Rd
XML/man/asXMLTreeNode.Rd
XML/man/asXMLNode.Rd
XML/man/append.XMLNode.Rd
XML/man/addSibling.Rd
XML/man/addNode.Rd
XML/man/addChildren.Rd
XML/man/XMLNode-class.Rd
XML/man/XMLInternalDocument.Rd
XML/man/XMLCodeFile-class.Rd
XML/man/XMLAttributes-class.Rd
XML/man/SAXState-class.Rd
XML/man/SAXMethods.Rd
XML/man/Doctype.Rd
XML/man/Doctype-class.Rd
XML/man/AssignXMLNode.Rd
XML/libxml2.9.R
XML/libxml/
XML/libxml/PATCH.attribute
XML/libxml/GNUmakefile
XML/inst/
XML/inst/scripts/
XML/inst/scripts/RSXML.csh.in
XML/inst/scripts/RSXML.bsh.in
XML/inst/examples/
XML/inst/examples/yeast_small-01.xml
XML/inst/examples/xpath.xml
XML/inst/examples/xpath.R
XML/inst/examples/xmlTree.R
XML/inst/examples/xmlTags.xml
XML/inst/examples/xmlSource.R
XML/inst/examples/xml2tex.Sxml
XML/inst/examples/writeExamples.S
XML/inst/examples/wordML.R
XML/inst/examples/valueFilterDataFrameEvent.R
XML/inst/examples/trademe_cars.R
XML/inst/examples/tags.Sxml
XML/inst/examples/svg.R
XML/inst/examples/schemas.xml
XML/inst/examples/schemaEg.xml
XML/inst/examples/schema.xsd
XML/inst/examples/sbmlSAX.S
XML/inst/examples/sbml.xml
XML/inst/examples/reorder.xml
XML/inst/examples/redirection.R
XML/inst/examples/rcode.xsl
XML/inst/examples/rcode.xml
XML/inst/examples/promptXML.Sxml
XML/inst/examples/promptXML.R
XML/inst/examples/prompt.xml
XML/inst/examples/pmml.R
XML/inst/examples/pi.xml
XML/inst/examples/oop.S
XML/inst/examples/newNodes.R
XML/inst/examples/namespaces1.S
XML/inst/examples/namespaces.S
XML/inst/examples/modified_itunes_sax.R
XML/inst/examples/mi1.R
XML/inst/examples/mexico.xml
XML/inst/examples/mexico.R
XML/inst/examples/metlin.R
XML/inst/examples/mathmlPlot.R
XML/inst/examples/mathml.R
XML/inst/examples/itunesSax2.R
XML/inst/examples/itunesSax1.R
XML/inst/examples/itunesSax.R
XML/inst/examples/itunes.xsl
XML/inst/examples/itunes.xml
XML/inst/examples/itunes.R
XML/inst/examples/internalXInclude.xml
XML/inst/examples/internalNodes.S
XML/inst/examples/index.html
XML/inst/examples/iTunes.plist
XML/inst/examples/hashTree.R
XML/inst/examples/gnumericHandler.R
XML/inst/examples/gettingStarted.xml
XML/inst/examples/gettingStarted.html
XML/inst/examples/getElements.S
XML/inst/examples/generic_file.xml
XML/inst/examples/genericHandlers.R
XML/inst/examples/functionIndex.Sxml
XML/inst/examples/formals.xsl
XML/inst/examples/foo.html
XML/inst/examples/filterDataFrameEvent.R
XML/inst/examples/faq.R
XML/inst/examples/eventHandlers.R
XML/inst/examples/event.S
XML/inst/examples/event.R
XML/inst/examples/enhancedDataFrame.R
XML/inst/examples/ecb.R
XML/inst/examples/docbook.R
XML/inst/examples/dataFrameEvent.R
XML/inst/examples/createTree1.R
XML/inst/examples/createTree.R
XML/inst/examples/connections1.R
XML/inst/examples/connections.R
XML/inst/examples/catalog.R
XML/inst/examples/bondsTables.R
XML/inst/examples/bondYields.R
XML/inst/examples/author.R
XML/inst/examples/SSource.dtd
XML/inst/examples/SAXEntity.R
XML/inst/examples/RhelpInfo.xml
XML/inst/examples/RhelpArchive.xml
XML/inst/examples/Rhelp.xml
XML/inst/examples/README
XML/inst/examples/HTMLText.R
XML/inst/examples/GNUmakefile
XML/inst/examples/DiGIR.R
XML/inst/examples/CIS.R
XML/inst/exampleData/
XML/inst/exampleData/xyz.svg.gz
XML/inst/exampleData/xysize.svg
XML/inst/exampleData/xpathTest.xml
XML/inst/exampleData/xinclude/
XML/inst/exampleData/xinclude/top.xml
XML/inst/exampleData/xinclude/simple.xml
XML/inst/exampleData/xinclude/e.xml
XML/inst/exampleData/xinclude/d.xml
XML/inst/exampleData/xinclude/c.xml
XML/inst/exampleData/xinclude/b.xml
XML/inst/exampleData/xinclude/a.xml
XML/inst/exampleData/writeRS.xml
XML/inst/exampleData/writeRS.S
XML/inst/exampleData/vars.xml
XML/inst/exampleData/utf.xml
XML/inst/exampleData/tides.xml
XML/inst/exampleData/test1.xml
XML/inst/exampleData/test.xml
XML/inst/exampleData/tagnames.xml
XML/inst/exampleData/symslines.svg
XML/inst/exampleData/svg.xml
XML/inst/exampleData/something.xml
XML/inst/exampleData/solr.xml
XML/inst/exampleData/size3.xml
XML/inst/exampleData/size2.xml
XML/inst/exampleData/size1.xml
XML/inst/exampleData/size.xml
XML/inst/exampleData/simple.xml
XML/inst/exampleData/simple.plist
XML/inst/exampleData/setInterval.xml
XML/inst/exampleData/same.xml
XML/inst/exampleData/rxinclude.xml
XML/inst/exampleData/rhelp.xsl
XML/inst/exampleData/reparent.xml
XML/inst/exampleData/redundantNS.xml
XML/inst/exampleData/raw.xml
XML/inst/exampleData/plist.xml
XML/inst/exampleData/nsAttrs.xml
XML/inst/exampleData/nodes3.xml
XML/inst/exampleData/nodes2.xml
XML/inst/exampleData/nodes1.xml
XML/inst/exampleData/nodes.xml
XML/inst/exampleData/namespaces2.xml
XML/inst/exampleData/namespaces1.xml
XML/inst/exampleData/namespaces.xml
XML/inst/exampleData/namespaceHandlers.xml
XML/inst/exampleData/mtcars.xml
XML/inst/exampleData/matrixMult.xml
XML/inst/exampleData/mathmlSums.xml
XML/inst/exampleData/mathmlSphere.xml
XML/inst/exampleData/mathmlSimple.xml
XML/inst/exampleData/mathmlSet.xml
XML/inst/exampleData/mathmlScript.xml
XML/inst/exampleData/mathmlRoot.xml
XML/inst/exampleData/mathmlQuadratic.xml
XML/inst/exampleData/mathmlMatrix.xml
XML/inst/exampleData/mathmlInt.xml
XML/inst/exampleData/mathmlFuncCall.xml
XML/inst/exampleData/mathml.xml
XML/inst/exampleData/mathml.dtd
XML/inst/exampleData/malformed.xml
XML/inst/exampleData/longitudinalData.xml
XML/inst/exampleData/literateFunction.xml
XML/inst/exampleData/literate.xsl
XML/inst/exampleData/literate.xml
XML/inst/exampleData/literate.dtd
XML/inst/exampleData/lists.html
XML/inst/exampleData/largeText.xml
XML/inst/exampleData/kiva_lender.xml
XML/inst/exampleData/job.xml
XML/inst/exampleData/include.xml
XML/inst/exampleData/iTunes.plist
XML/inst/exampleData/graph.gxl
XML/inst/exampleData/gnumeric.xml
XML/inst/exampleData/generalInfo.xml
XML/inst/exampleData/functionTemplate.xml
XML/inst/exampleData/foo.dtd
XML/inst/exampleData/event.xml
XML/inst/exampleData/eurofxref-hist.xml.gz
XML/inst/exampleData/entityValue
XML/inst/exampleData/entity4.xml
XML/inst/exampleData/entity3.html
XML/inst/exampleData/entity2.xml
XML/inst/exampleData/entity1.xml
XML/inst/exampleData/entity.xml
XML/inst/exampleData/dtd.zip
XML/inst/exampleData/dot.xml
XML/inst/exampleData/dataframe.xml
XML/inst/exampleData/content.html
XML/inst/exampleData/cleanNamespace.xml
XML/inst/exampleData/charts.svg
XML/inst/exampleData/cdata.xml
XML/inst/exampleData/catalog.xml
XML/inst/exampleData/branch.xml
XML/inst/exampleData/boxplot.svg
XML/inst/exampleData/book.xml
XML/inst/exampleData/basic.xml
XML/inst/exampleData/author2.xsd
XML/inst/exampleData/author2.xml
XML/inst/exampleData/author1.xml
XML/inst/exampleData/author.xsd
XML/inst/exampleData/author.xml
XML/inst/exampleData/allNodeTypes.xml
XML/inst/exampleData/TestInvalid.xml
XML/inst/exampleData/StatModel.dtd
XML/inst/exampleData/SOAPNamespaces.xml
XML/inst/exampleData/Rsource.xml
XML/inst/exampleData/Rref.xml
XML/inst/exampleData/README
XML/inst/exampleData/GNUmakefile
XML/inst/exampleData/9003.html
XML/inst/exampleData/9003-en.html
XML/index.html.in
XML/index.html
XML/expat/
XML/expat/xmltok/
XML/expat/xmltok/GNUmakefile
XML/expat/xmlparse/
XML/expat/xmlparse/GNUmakefile
XML/expat/GNUmakefile.lib
XML/expat/GNUmakefile
XML/dotCalls
XML/configure.win
XML/configure.in
XML/configure
XML/cleanup
XML/checkLinks/
XML/checkLinks/other_checkLinks.R
XML/checkLinks/checkLinks.R
XML/checkLinks/big_checkLinks.R
XML/addFinalizer
XML/a.out.dSYM/
XML/a.out.dSYM/Contents/
XML/a.out.dSYM/Contents/Resources/
XML/a.out.dSYM/Contents/Resources/DWARF/
XML/a.out.dSYM/Contents/Resources/DWARF/a.out
XML/a.out.dSYM/Contents/Info.plist
XML/VersionInfo
XML/Todo.xml
XML/Todo-orig.html
XML/TAGS
XML/Rsamples/
XML/Rsamples/userClasses.R
XML/Rsamples/tt.R
XML/Rsamples/tryBug.R
XML/Rsamples/toList.R
XML/Rsamples/testNew.R
XML/Rsamples/testGC.R
XML/Rsamples/test.R
XML/Rsamples/stop.R
XML/Rsamples/parent.R
XML/Rsamples/ns.R
XML/Rsamples/humus.R
XML/Rsamples/hhtmlFree.R
XML/Rsamples/gc2.R
XML/Rsamples/gc1.R
XML/Rsamples/gc.R
XML/Rsamples/free.R
XML/Rsamples/findXInclude.R
XML/Rsamples/encoding.R
XML/Rsamples/check.R
XML/Rsamples/attrs.R
XML/Rsamples/addChildren.R
XML/README.windows
XML/README
XML/R/
XML/R/zzz.R
XML/R/xmlTreeParse.R
XML/R/xmlTree.R
XML/R/xmlToDataFrame.R
XML/R/xmlString.R
XML/R/xmlRoot.R
XML/R/xmlOutputDOM.R
XML/R/xmlOutputBuffer.R
XML/R/xmlNodes.R
XML/R/xmlMemoryMgmt.R
XML/R/xmlInternalSource.R
XML/R/xmlIncludes.R
XML/R/xmlHandler.R
XML/R/xmlEventParse.R
XML/R/xmlEventHandler.R
XML/R/xmlErrorEnums.R
XML/R/xincludes.R
XML/R/version.R
XML/R/tree.R
XML/R/toString.S
XML/R/tangle1.R
XML/R/tangle.R
XML/R/supports.R.in
XML/R/summary.R
XML/R/solrDocs.R
XML/R/simplifyPath.R
XML/R/serialize.R
XML/R/schema.S
XML/R/saveXML.R
XML/R/reflection.R
XML/R/readHTMLTable.R
XML/R/parser.R
XML/R/parseDTD.R
XML/R/nodeAccessors.R
XML/R/namespaces.R
XML/R/namespaceHandlers.R
XML/R/libxmlFeatures.R
XML/R/keyValueDB.R
XML/R/htmlParse.R
XML/R/htmlLists.R
XML/R/htmlLinks.R
XML/R/hashTree.R
XML/R/getRelativeURL.R
XML/R/getDependencies.R
XML/R/flatTree.R
XML/R/fixNS.R
XML/R/error.R
XML/R/encoding.R
XML/R/dynSupports.R
XML/R/createNode.R
XML/R/compare.R
XML/R/catalog.R
XML/R/bitList.R
XML/R/assignChild.R
XML/R/applyDOM.R
XML/R/XMLRErrorInfo.R
XML/R/XMLClasses.R
XML/R/SAXMethods.S
XML/R/DTDRef.R
XML/R/DTDClasses.R
XML/R/DTD.R
XML/R/AAA.R
XML/QuestionSolutions/
XML/QuestionSolutions/NeuroRetina/
XML/QuestionSolutions/NeuroRetina/tracing.xml
XML/QuestionSolutions/NeuroRetina/neuro.R
XML/Notes
XML/NodeFuns
XML/NAMESPACE.in
XML/NAMESPACE
XML/MemoryBug.R
XML/Makevars.in
XML/GNUmakefile.admin
XML/GNUmakefile
XML/FIXME_NOW
XML/FAQ.html
XML/Docs/
XML/Docs/shortIntro.xml
XML/Docs/navigation.xml
XML/Docs/memory.tex
XML/Docs/manual.xml
XML/Docs/manual.nw
XML/Docs/literate.nw
XML/Docs/job.xml
XML/Docs/htmlTable.xml
XML/Docs/exercises.xml
XML/Docs/description.xml
XML/Docs/description.nw
XML/Docs/bibliog.bib
XML/Docs/WritingXML.html
XML/Docs/Tour.xml
XML/Docs/Tour.nw
XML/Docs/Schema.xml
XML/Docs/SSource.xml
XML/Docs/RXML.xml
XML/Docs/RSXML.nw
XML/Docs/RSHelp.xml
XML/Docs/RS.xml
XML/Docs/Outline.xml
XML/Docs/Outline.nw
XML/Docs/OOP.nw
XML/Docs/ModernDoc.pdf
XML/Docs/ModernDoc.html
XML/Docs/ModernDoc.Rdb
XML/Docs/MemoryManagement.pdf
XML/Docs/MemoryManagement.html
XML/Docs/MathML.xml
XML/Docs/MathML.nw
XML/Docs/InternalDOM.nw
XML/Docs/GeneratingXML.nw
XML/Docs/GeneralHandlers.xml
XML/Docs/GNUmakefile
XML/Docs/CreatingXML.xml
XML/DESCRIPTION.in
XML/DESCRIPTION
XML/Copyright
XML/CodeDetails
XML/Check
XML/Changes
XML/Bugs.html
XML/Bugs/
XML/Bugs/wormmart.R
XML/Bugs/memory.R
XML/Bugs/createXMLNode.R
XML/Bugs/XMLStuff
XML/Bug.R
sudo -u fink-bld [ENV] sh -c /tmp/fink.PzJ5D
/tmp/fink.bMI_T
#!/bin/sh -ev
export TMPDIR=/sw/build.build/cran-xml-r215-3.98-1.1-1/XML/tmp
BIN_R=/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R
# perl -pi -e "s/LIBXML2_OK=0/LIBXML2_OK=1/g" configure
pushd ..
/sw/build.build/cran-xml-r215-3.98-1.1-1 /sw/build.build/cran-xml-r215-3.98-1.1-1/XML
if [[ 2.15 > 2.15 ]]; then
$BIN_R --verbose CMD build --no-build-vignettes XML
else
$BIN_R --verbose CMD build --no-vignettes XML
fi
* checking for file 'XML/DESCRIPTION' ... OK
* preparing 'XML':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* running 'cleanup'
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'XML_3.98-1.1.tar.gz'
/bin/rm -rf /sw/build.build/root-cran-xml-r215-3.98-1.1-1
/bin/mkdir -p /sw/build.build/root-cran-xml-r215-3.98-1.1-1/sw
/bin/mkdir -p /sw/build.build/root-cran-xml-r215-3.98-1.1-1/DEBIAN
/usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-cran-xml-r215-3.98-1.1-1
sudo -u fink-bld [ENV] sh -c /tmp/fink.dKq8y
/tmp/fink.aN12A
#!/bin/sh -ev
BIN_R=/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R
mkdir -p /sw/build.build/root-cran-xml-r215-3.98-1.1-1/sw/lib/R/2.15/site-library
pushd /sw/build.build/cran-xml-r215-3.98-1.1-1/XML/.. && $BIN_R --verbose CMD install --library=/sw/build.build/root-cran-xml-r215-3.98-1.1-1/sw/lib/R/2.15/site-library XML
/sw/build.build/cran-xml-r215-3.98-1.1-1 /sw/build.build/cran-xml-r215-3.98-1.1-1/XML
* installing *source* package 'XML' ...
** package 'XML' successfully unpacked and MD5 sums checked
checking for gcc... gcc
checking for C compiler default output file name... rm: a.out.dSYM: is a directory
a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -E
checking for sed... /usr/bin/sed
checking for pkg-config... no
checking for xml2-config... /sw/bin/xml2-config
USE_XML2 = yes
SED_EXTENDED_ARG: -E
Minor 9, Patch 1 for 2.9.1
Located parser file -I/sw/include/libxml2 -I/sw/include/parser.h
Checking for 1.8: -I/sw/include/libxml2 -I/sw/include
Using libxml2.*
checking for gzopen in -lz... yes
checking for xmlParseFile in -lxml2... yes
checking for xmlHashSize in -lxml2... yes
Using built-in xmlHashSize
Checking DTD parsing (presence of externalSubset)...
checking for xmlHashSize in -lxml2... yes
Found xmlHashSize
checking for xmlOutputBufferCreateBuffer in -lxml2... yes
have xmlOutputBufferCreateBuffer()
checking for xmlDocDumpFormatMemoryEnc in -lxml2... yes
checking libxml/xmlversion.h usability... yes
checking libxml/xmlversion.h presence... yes
checking for libxml/xmlversion.h... yes
Expat: FALSE
Checking for return type of xmlHashScan element routine.
No return value for xmlHashScan
xmlNs has a context field
Checking for cetype_t enumeration
Using recent version of R with cetype_t enumeration type for encoding
checking for xmlsec1-config... no
nodegc default
xml-debug default
Version has XML_WITH_ZLIB
Version has xmlHasFeature()
****************************************
Configuration information:
Libxml settings
libxml include directory: -I/sw/include/libxml2 -I/sw/include
libxml library directory: -L/sw/lib -lxml2 -lz -lpthread -L/sw/lib -liconv -lm -lz -lxml2
libxml 2: -DLIBXML2=1
Compilation flags: -DLIBXML -I/sw/include/libxml2 -I/sw/include -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1
Link flags: -L/sw/lib -lxml2 -lz -lpthread -L/sw/lib -liconv -lm -lz -lxml2
****************************************
configure: creating ./config.status
config.status: creating src/Makevars
config.status: creating R/supports.R
config.status: creating inst/scripts/RSXML.csh
config.status: creating inst/scripts/RSXML.bsh
** libs
flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -DLIBXML -I/sw/include/libxml2 -I/sw/include -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/sw/include -fPIC -g -O3 -c DocParse.c -o DocParse.o
DocParse.c:375:60: warning: passing 'const char *' to parameter of type 'const xmlChar *' (aka 'const unsigned char *') converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(VECTOR_ELT(rdoc, FILE_ELEMENT_NAME), 0, ENC_COPY_TO_USER_STRING(doc->name ? XMLCHAR_TO_CHAR(doc->name) : fileName));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:235:74: note: expanded from macro 'ENC_COPY_TO_USER_STRING'
#define ENC_COPY_TO_USER_STRING(x) CreateCharSexpWithEncoding(encoding, CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
./Utils.h:220:73: note: passing argument to parameter 'str' here
SEXP CreateCharSexpWithEncoding(const xmlChar *encoding, const xmlChar *str);
^
DocParse.c:376:54: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(rdoc_el_names, FILE_ELEMENT_NAME, COPY_TO_USER_STRING("file"));
^~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
DocParse.c:384:38: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
COPY_TO_USER_STRING(version));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
DocParse.c:385:55: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(rdoc_el_names, VERSION_ELEMENT_NAME, COPY_TO_USER_STRING("version"));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
DocParse.c:405:56: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(rdoc_el_names, CHILDREN_ELEMENT_NAME, COPY_TO_USER_STRING("children"));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
DocParse.c:410:28: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(klass, 0, COPY_TO_USER_STRING("XMLDocumentContent"));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
DocParse.c:615:53: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(ans_el_names, NUM_NODE_ELEMENTS, COPY_TO_USER_STRING("value"));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
DocParse.c:768:31: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(klass, 0, COPY_TO_USER_STRING("XMLNamespaceDefinition"));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
DocParse.c:1226:31: warning: passing 'char *' to parameter of type 'const xmlChar *' (aka 'const unsigned char *') converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(names, i, ENC_COPY_TO_USER_STRING(ptr->name ? XMLCHAR_TO_CHAR(ptr->name) : ""));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:235:74: note: expanded from macro 'ENC_COPY_TO_USER_STRING'
#define ENC_COPY_TO_USER_STRING(x) CreateCharSexpWithEncoding(encoding, CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
./Utils.h:220:73: note: passing argument to parameter 'str' here
SEXP CreateCharSexpWithEncoding(const xmlChar *encoding, const xmlChar *str);
^
9 warnings generated.
flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -DLIBXML -I/sw/include/libxml2 -I/sw/include -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/sw/include -fPIC -g -O3 -c EventParse.c -o EventParse.o
EventParse.c:218:45: warning: passing 'const XML_Char *' (aka 'const char *') to parameter of type 'const xmlChar *' (aka 'const unsigned char *') converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(VECTOR_ELT(opArgs, i), 0, ENC_COPY_TO_USER_STRING(xml_args[i] ? xml_args[i] : ""));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:235:74: note: expanded from macro 'ENC_COPY_TO_USER_STRING'
#define ENC_COPY_TO_USER_STRING(x) CreateCharSexpWithEncoding(encoding, CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
./Utils.h:220:73: note: passing argument to parameter 'str' here
SEXP CreateCharSexpWithEncoding(const xmlChar *encoding, const xmlChar *str);
^
EventParse.c:405:6: warning: assigning to 'xmlChar *' (aka 'unsigned char *') from 'char *' converts between pointers to integer types with different sign [-Wpointer-sign]
tmp = strdup("");
^ ~~~~~~~~~~
2 warnings generated.
flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -DLIBXML -I/sw/include/libxml2 -I/sw/include -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/sw/include -fPIC -g -O3 -c ExpatParse.c -o ExpatParse.o
flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -DLIBXML -I/sw/include/libxml2 -I/sw/include -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/sw/include -fPIC -g -O3 -c HTMLParse.c -o HTMLParse.o
flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -DLIBXML -I/sw/include/libxml2 -I/sw/include -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/sw/include -fPIC -g -O3 -c NodeGC.c -o NodeGC.o
NodeGC.c:178:12: warning: incompatible pointer to integer conversion assigning to 'int' from 'int *'; remove & [-Wint-conversion]
val[1] = R_MEMORY_MANAGER_MARKER;
^ ~~~~~~~~~~~~~~~~~~~~~~~
1 warning generated.
flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -DLIBXML -I/sw/include/libxml2 -I/sw/include -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/sw/include -fPIC -g -O3 -c RSDTD.c -o RSDTD.o
RSDTD.c:325:56: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(scanData->dtdNames, scanData->counter, COPY_TO_USER_STRING(XMLCHAR_TO_CHAR(name)));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
RSDTD.c:399:56: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(scanData->dtdNames, scanData->counter, COPY_TO_USER_STRING(XMLCHAR_TO_CHAR(name)));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
RSDTD.c:434:60: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(VECTOR_ELT(ans, DTD_ENTITY_NAME_SLOT), 0, COPY_TO_USER_STRING(XMLCHAR_TO_CHAR(entity->name)));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
RSDTD.c:445:64: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(VECTOR_ELT(ans, DTD_ENTITY_CONTENT_SLOT), 0, COPY_TO_USER_STRING(XMLCHAR_TO_CHAR(value)));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
RSDTD.c:449:64: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(VECTOR_ELT(ans, DTD_ENTITY_ORIG_SLOT), 0, COPY_TO_USER_STRING(XMLCHAR_TO_CHAR(entity->orig)));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
RSDTD.c:491:60: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(VECTOR_ELT(rel, DTD_ELEMENT_NAME_SLOT), 0, COPY_TO_USER_STRING( XMLCHAR_TO_CHAR( ( el->name ? el->name : (xmlChar*)""))));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
RSDTD.c:578:71: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(VECTOR_ELT(ans, DTD_CONTENT_ELEMENTS_SLOT), 0, COPY_TO_USER_STRING(XMLCHAR_TO_CHAR(vals->name)));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
RSDTD.c:678:33: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(names, i, COPY_TO_USER_STRING(XMLCHAR_TO_CHAR(tmp->name)));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
RSDTD.c:727:63: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(VECTOR_ELT(ans, DTD_ATTRIBUTE_NAME_SLOT), 0, COPY_TO_USER_STRING(XMLCHAR_TO_CHAR(val->name)));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
RSDTD.c:741:74: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(VECTOR_ELT(ans, DTD_ATTRIBUTE_DEFAULT_VALUE_SLOT), 0, COPY_TO_USER_STRING( XMLCHAR_TO_CHAR( (val->defaultValue ? val->defaultValue : (xmlChar*)""))));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
RSDTD.c:779:30: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(ans, i, COPY_TO_USER_STRING(XMLCHAR_TO_CHAR(tmp->name)));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
11 warnings generated.
flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -DLIBXML -I/sw/include/libxml2 -I/sw/include -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/sw/include -fPIC -g -O3 -c RUtils.c -o RUtils.o
RUtils.c:341:55: warning: result of comparison against a string literal is unspecified (use strncmp instead) [-Wstring-compare]
if(encoding == (const xmlChar *) NULL || encoding == (const xmlChar *) "") {
^ ~~~~~~~~~~~~~~~~~~~~
RUtils.c:343:35: warning: passing 'char [6]' to parameter of type 'const xmlChar *' (aka 'const unsigned char *') converts between pointers to integer types with different sign [-Wpointer-sign]
} else if(xmlStrcmp(encoding, "UTF-8") == 0 || xmlStrcmp(encoding, "utf-8") == 0)
^~~~~~~
/sw/include/libxml2/libxml/xmlstring.h:65:57: note: passing argument to parameter 'str2' here
const xmlChar *str2);
^
RUtils.c:343:72: warning: passing 'char [6]' to parameter of type 'const xmlChar *' (aka 'const unsigned char *') converts between pointers to integer types with different sign [-Wpointer-sign]
} else if(xmlStrcmp(encoding, "UTF-8") == 0 || xmlStrcmp(encoding, "utf-8") == 0)
^~~~~~~
/sw/include/libxml2/libxml/xmlstring.h:65:57: note: passing argument to parameter 'str2' here
const xmlChar *str2);
^
RUtils.c:345:33: warning: passing 'char [11]' to parameter of type 'const xmlChar *' (aka 'const unsigned char *') converts between pointers to integer types with different sign [-Wpointer-sign]
else if(xmlStrcmp(encoding, "ISO-8859-1") == 0 || xmlStrcmp(encoding, "iso-8859-1") == 0)
^~~~~~~~~~~~
/sw/include/libxml2/libxml/xmlstring.h:65:57: note: passing argument to parameter 'str2' here
const xmlChar *str2);
^
RUtils.c:345:75: warning: passing 'char [11]' to parameter of type 'const xmlChar *' (aka 'const unsigned char *') converts between pointers to integer types with different sign [-Wpointer-sign]
else if(xmlStrcmp(encoding, "ISO-8859-1") == 0 || xmlStrcmp(encoding, "iso-8859-1") == 0)
^~~~~~~~~~~~
/sw/include/libxml2/libxml/xmlstring.h:65:57: note: passing argument to parameter 'str2' here
const xmlChar *str2);
^
RUtils.c:348:29: warning: passing 'const xmlChar *' (aka 'const unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
str = translateChar(mkChar(str));
^~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
RUtils.c:348:6: warning: assigning to 'const xmlChar *' (aka 'const unsigned char *') from 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
str = translateChar(mkChar(str));
^ ~~~~~~~~~~~~~~~~~~~~~~~~~~
RUtils.c:351:20: warning: passing 'const xmlChar *' (aka 'const unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
ans = mkCharCE(str, enc);
^~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:675:30: note: passing argument to parameter here
SEXP Rf_mkCharCE(const char *, cetype_t);
^
8 warnings generated.
flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -DLIBXML -I/sw/include/libxml2 -I/sw/include -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/sw/include -fPIC -g -O3 -c Rcatalog.c -o Rcatalog.o
flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -DLIBXML -I/sw/include/libxml2 -I/sw/include -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/sw/include -fPIC -g -O3 -c Utils.c -o Utils.o
flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -DLIBXML -I/sw/include/libxml2 -I/sw/include -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/sw/include -fPIC -g -O3 -c XMLEventParse.c -o XMLEventParse.o
XMLEventParse.c:383:49: warning: passing 'char *' to parameter of type 'const xmlChar *' (aka 'const unsigned char *') converts between pointers to integer types with different sign [-Wpointer-sign]
xmlSetProp(node, xmlStrdup(ptr[0]), getPropertyValue(ptr));
^~~~~~~~~~~~~~~~~~~~~
/sw/include/libxml2/libxml/tree.h:1010:22: note: passing argument to parameter 'value' here
const xmlChar *value);
^
XMLEventParse.c:442:19: warning: passing 'char [4]' to parameter of type 'const xmlChar *' (aka 'const unsigned char *') converts between pointers to integer types with different sign [-Wpointer-sign]
doc = xmlNewDoc("1.0");
^~~~~
/sw/include/libxml2/libxml/tree.h:775:30: note: passing argument to parameter 'version' here
xmlNewDoc (const xmlChar *version);
^
XMLEventParse.c:528:72: warning: passing 'char *' to parameter of type 'const xmlChar *' (aka 'const unsigned char *') converts between pointers to integer types with different sign [-Wpointer-sign]
SET_NAMES(tmp, ScalarString(CreateCharSexpWithEncoding(encoding, ( (void*)prefix ? XMLCHAR_TO_CHAR(prefix) : ""))));
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rdefines.h:135:54: note: expanded from macro 'SET_NAMES'
#define SET_NAMES(x, n) setAttrib(x, R_NamesSymbol, n)
^
./Utils.h:220:73: note: passing argument to parameter 'str' here
SEXP CreateCharSexpWithEncoding(const xmlChar *encoding, const xmlChar *str);
^
XMLEventParse.c:579:30: warning: passing 'char *' to parameter of type 'const xmlChar *' (aka 'const unsigned char *') converts between pointers to integer types with different sign [-Wpointer-sign]
PROTECT(tmp = ScalarString(ENC_COPY_TO_USER_STRING((XMLCHAR_TO_CHAR(URI)) ? XMLCHAR_TO_CHAR(URI) : "")));
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:235:74: note: expanded from macro 'ENC_COPY_TO_USER_STRING'
#define ENC_COPY_TO_USER_STRING(x) CreateCharSexpWithEncoding(encoding, CHAR_TO_XMLCHAR (x))
^
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:488:31: note: expanded from macro 'PROTECT'
#define PROTECT(s) Rf_protect(s)
^
./Utils.h:220:73: note: passing argument to parameter 'str' here
SEXP CreateCharSexpWithEncoding(const xmlChar *encoding, const xmlChar *str);
^
XMLEventParse.c:584:27: warning: passing 'const xmlChar *' (aka 'const unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
fun = findEndElementFun(localname, rinfo);
^~~~~~~~~
./EventParse.h:178:44: note: passing argument to parameter 'name' here
USER_OBJECT_ findEndElementFun(const char *name, RS_XMLParserData *rinfo);
^
5 warnings generated.
flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -DLIBXML -I/sw/include/libxml2 -I/sw/include -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/sw/include -fPIC -g -O3 -c XMLHashTree.c -o XMLHashTree.o
XMLHashTree.c:87:29: warning: passing 'const xmlChar *' (aka 'const unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_NAMES(tmp, mkString(node->ns->prefix));
^~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rdefines.h:135:54: note: expanded from macro 'SET_NAMES'
#define SET_NAMES(x, n) setAttrib(x, R_NamesSymbol, n)
^
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:1065:31: note: passing argument to parameter here
SEXP Rf_mkString(const char *);
^
XMLHashTree.c:93:41: warning: passing 'char *' to parameter of type 'const xmlChar *' (aka 'const unsigned char *') converts between pointers to integer types with different sign [-Wpointer-sign]
SET_VECTOR_ELT(ans, i++, ScalarString(ENC_COPY_TO_USER_STRING(node->ns && node->ns->prefix ? XMLCHAR_TO_CHAR(node->ns->prefix) : "")));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:235:74: note: expanded from macro 'ENC_COPY_TO_USER_STRING'
#define ENC_COPY_TO_USER_STRING(x) CreateCharSexpWithEncoding(encoding, CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
./Utils.h:220:73: note: passing argument to parameter 'str' here
SEXP CreateCharSexpWithEncoding(const xmlChar *encoding, const xmlChar *str);
^
XMLHashTree.c:99:40: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_VECTOR_ELT(ans, i++, mkString(node->content));
^~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:1065:31: note: passing argument to parameter here
SEXP Rf_mkString(const char *);
^
XMLHashTree.c:109:34: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(names, i++, COPY_TO_USER_STRING("value"));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
XMLHashTree.c:111:34: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(names, i++, COPY_TO_USER_STRING("namespaceDefinitions"));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
XMLHashTree.c:120:30: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(names, i++, COPY_TO_USER_STRING("XMLHashTreeNode"));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
XMLHashTree.c:122:33: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(names, i++, COPY_TO_USER_STRING("XMLTextNode"));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
XMLHashTree.c:124:33: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(names, i++, COPY_TO_USER_STRING("XMLCommentNode"));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
XMLHashTree.c:126:33: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(names, i++, COPY_TO_USER_STRING("XMLCDataNode"));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
XMLHashTree.c:128:33: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(names, i++, COPY_TO_USER_STRING("XMLPINode"));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
XMLHashTree.c:130:30: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(names, i++, COPY_TO_USER_STRING("XMLNode"));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
11 warnings generated.
flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -DLIBXML -I/sw/include/libxml2 -I/sw/include -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/sw/include -fPIC -g -O3 -c XMLTree.c -o XMLTree.o
XMLTree.c:224:55: warning: passing 'const xmlChar *' (aka 'const unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
if(!(id[0] && !p->prefix) || (p->prefix && strcmp(p->prefix, id) == 0)) {
^~~~~~~~~
/usr/include/string.h:77:25: note: passing argument to parameter here
int strcmp(const char *, const char *);
^
XMLTree.c:233:52: warning: passing 'const xmlChar *' (aka 'const unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
if((!id[0] && !p->prefix) || (p->prefix && strcmp(p->prefix, id) == 0)) {
^~~~~~~~~
/usr/include/string.h:77:25: note: passing argument to parameter here
int strcmp(const char *, const char *);
^
XMLTree.c:308:56: warning: passing 'const xmlChar *' (aka 'const unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
LOGICAL(ans)[i] = removeNodeNamespaceByName(node, p->prefix);
^~~~~~~~~
XMLTree.c:216:63: note: passing argument to parameter 'id' here
removeNodeNamespaceByName(xmlNodePtr node, const char * const id)
^
XMLTree.c:503:23: warning: passing 'const char *' to parameter of type 'const xmlChar *' (aka 'const unsigned char *') converts between pointers to integer types with different sign [-Wpointer-sign]
n = xmlNewText(CHAR(STRING_ELT(node, i)));
^~~~~~~~~~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:339:18: note: expanded from macro 'CHAR'
#define CHAR(x) R_CHAR(x)
^~~~~~~~~
/sw/include/libxml2/libxml/tree.h:848:31: note: passing argument to parameter 'content' here
xmlNewText (const xmlChar *content);
^
XMLTree.c:743:21: warning: passing 'char [1]' to parameter of type 'const xmlChar *' (aka 'const unsigned char *') converts between pointers to integer types with different sign [-Wpointer-sign]
doc = htmlNewDoc("", NULL);
^~
/sw/include/libxml2/libxml/HTMLtree.h:63:31: note: passing argument to parameter 'URI' here
htmlNewDoc (const xmlChar *URI,
^
XMLTree.c:954:27: warning: passing 'const xmlChar *' (aka 'const unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
PROTECT(ans = mkString(ns->href));
^~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:488:31: note: expanded from macro 'PROTECT'
#define PROTECT(s) Rf_protect(s)
^
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:1065:31: note: passing argument to parameter here
SEXP Rf_mkString(const char *);
^
XMLTree.c:1103:9: warning: incompatible pointer to integer conversion assigning to 'int' from 'int *'; remove & [-Wint-conversion]
val[1] = R_MEMORY_MANAGER_MARKER;
^ ~~~~~~~~~~~~~~~~~~~~~~~
XMLTree.c:1456:55: warning: passing 'const char *' to parameter of type 'const xmlChar *' (aka 'const unsigned char *') converts between pointers to integer types with different sign [-Wpointer-sign]
ans = ScalarString(CreateCharSexpWithEncoding(encoding, xbuf->content));
^~~~~~~~
./Utils.h:220:48: note: passing argument to parameter 'encoding' here
SEXP CreateCharSexpWithEncoding(const xmlChar *encoding, const xmlChar *str);
^
XMLTree.c:1458:37: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
ans = ScalarString(mkCharCE(xbuf->content, INTEGER(r_encoding_int)[0]));
^~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:675:30: note: passing argument to parameter here
SEXP Rf_mkCharCE(const char *, cetype_t);
^
XMLTree.c:1495:25: warning: passing 'const char *' to parameter of type 'const xmlChar *' (aka 'const unsigned char *') converts between pointers to integer types with different sign [-Wpointer-sign]
xmlNodeSetContent(n, str);
^~~
/sw/include/libxml2/libxml/tree.h:1053:22: note: passing argument to parameter 'content' here
const xmlChar *content);
^
XMLTree.c:1536:37: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
ans = ScalarString(mkCharCE(tmp, INTEGER(r_encoding)[0]));
^~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:675:30: note: passing argument to parameter here
SEXP Rf_mkCharCE(const char *, cetype_t);
^
XMLTree.c:1695:39: warning: comparison of distinct pointer types ('xmlDocPtr' (aka 'struct _xmlDoc *') and 'SEXP' (aka 'struct SEXPREC *')) [-Wcompare-distinct-pointer-types]
xmlDocPtr doc = (xmlDocPtr) r_doc == NULL_USER_OBJECT ? NULL : R_ExternalPtrAddr(r_doc);
~~~~~~~~~~~~~~~~~ ^ ~~~~~~~~~~~~~~~~
XMLTree.c:1703:58: warning: passing 'const char *' to parameter of type 'const xmlChar *' (aka 'const unsigned char *') converts between pointers to integer types with different sign [-Wpointer-sign]
ns = LOGICAL(r_asPrefix)[0] ? xmlSearchNs(doc, node, val) : xmlSearchNsByHref(doc, node, val);
^~~
/sw/include/libxml2/libxml/tree.h:984:22: note: passing argument to parameter 'nameSpace' here
const xmlChar *nameSpace);
^
XMLTree.c:1703:94: warning: passing 'const char *' to parameter of type 'const xmlChar *' (aka 'const unsigned char *') converts between pointers to integer types with different sign [-Wpointer-sign]
ns = LOGICAL(r_asPrefix)[0] ? xmlSearchNs(doc, node, val) : xmlSearchNsByHref(doc, node, val);
^~~
/sw/include/libxml2/libxml/tree.h:988:22: note: passing argument to parameter 'href' here
const xmlChar *href);
^
XMLTree.c:1709:28: warning: passing 'const xmlChar *' (aka 'const unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
PROTECT(r_ans = mkString(ns->href));
^~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:488:31: note: expanded from macro 'PROTECT'
#define PROTECT(s) Rf_protect(s)
^
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:1065:31: note: passing argument to parameter here
SEXP Rf_mkString(const char *);
^
XMLTree.c:1745:31: warning: passing 'const xmlChar *' (aka 'const unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
if(ptr->name && strcmp(name, ptr->name) == 0)
^~~~~~~~~
/usr/include/string.h:77:39: note: passing argument to parameter here
int strcmp(const char *, const char *);
^
XMLTree.c:1790:22: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SEXP val = mkCharCE(tmp, encoding);
^~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:675:30: note: passing argument to parameter here
SEXP Rf_mkCharCE(const char *, cetype_t);
^
XMLTree.c:1797:40: warning: passing 'const xmlChar *' (aka 'const unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(names, i, mkCharCE(kid->name, encoding));
^~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:675:30: note: passing argument to parameter here
SEXP Rf_mkCharCE(const char *, cetype_t);
^
18 warnings generated.
flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -DLIBXML -I/sw/include/libxml2 -I/sw/include -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/sw/include -fPIC -g -O3 -c fixNS.c -o fixNS.o
fixNS.c:32:21: warning: passing 'const xmlChar *' (aka 'const unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
if(ns && strcmp(ns->href, "<dummy>") == 0)
^~~~~~~~
/usr/include/string.h:77:25: note: passing argument to parameter here
int strcmp(const char *, const char *);
^
fixNS.c:75:37: warning: passing 'const xmlChar *' (aka 'const unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
if(prefix && ptr->prefix && strcmp(ptr->prefix, prefix) == 0)
^~~~~~~~~~~
/usr/include/string.h:77:25: note: passing argument to parameter here
int strcmp(const char *, const char *);
^
fixNS.c:75:50: warning: passing 'const xmlChar *' (aka 'const unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
if(prefix && ptr->prefix && strcmp(ptr->prefix, prefix) == 0)
^~~~~~
/usr/include/string.h:77:39: note: passing argument to parameter here
int strcmp(const char *, const char *);
^
3 warnings generated.
flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -DLIBXML -I/sw/include/libxml2 -I/sw/include -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/sw/include -fPIC -g -O3 -c libxmlFeatures.c -o libxmlFeatures.o
flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -DLIBXML -I/sw/include/libxml2 -I/sw/include -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/sw/include -fPIC -g -O3 -c schema.c -o schema.o
schema.c:78:37: warning: passing 'xmlChar *' (aka 'unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_STRING_ELT(d->names, d->pos, COPY_TO_USER_STRING(name));
^~~~~~~~~~~~~~~~~~~~~~~~~
./Utils.h:234:40: note: expanded from macro 'COPY_TO_USER_STRING'
#define COPY_TO_USER_STRING(x) mkChar(CHAR_TO_XMLCHAR (x))
^~~~~~~~~~~~~~~~~~~
./Utils.h:12:31: note: expanded from macro 'CHAR_TO_XMLCHAR'
#define CHAR_TO_XMLCHAR(val) ((xmlChar *) val)
^~~~~~~~~~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:629:28: note: passing argument to parameter here
SEXP Rf_mkChar(const char *);
^
schema.c:122:25: warning: passing 'const char *' to parameter of type 'const xmlChar *' (aka 'const unsigned char *') converts between pointers to integer types with different sign [-Wpointer-sign]
p = xmlHashLookup(t, CHAR_DEREF(STRING_ELT(name, 0)));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./RSCommon.h:140:27: note: expanded from macro 'CHAR_DEREF'
#define CHAR_DEREF(x) CHAR((x))
^~~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:339:18: note: expanded from macro 'CHAR'
#define CHAR(x) R_CHAR(x)
^~~~~~~~~
/sw/include/libxml2/libxml/hash.h:171:22: note: passing argument to parameter 'name' here
const xmlChar *name);
^
2 warnings generated.
flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -DLIBXML -I/sw/include/libxml2 -I/sw/include -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/sw/include -fPIC -g -O3 -c xmlsecurity.c -o xmlsecurity.o
flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -DLIBXML -I/sw/include/libxml2 -I/sw/include -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/sw/include -fPIC -g -O3 -c xpath.c -o xpath.o
xpath.c:36:41: warning: passing 'const xmlChar *' (aka 'const unsigned char *') to parameter of type 'const char *' converts between pointers to integer types with different sign [-Wpointer-sign]
SET_NAMES(ref, ScalarString(mkCharCE(el->name, encoding)));
^~~~~~~~
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rdefines.h:135:54: note: expanded from macro 'SET_NAMES'
#define SET_NAMES(x, n) setAttrib(x, R_NamesSymbol, n)
^
/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include/Rinternals.h:675:30: note: passing argument to parameter here
SEXP Rf_mkCharCE(const char *, cetype_t);
^
1 warning generated.
flag-sort -r gcc -ffor-scope -dynamiclib -Wl,-headerpad_max_install_names -single_module -multiply_defined suppress -L/sw/lib -o XML.dylib DocParse.o EventParse.o ExpatParse.o HTMLParse.o NodeGC.o RSDTD.o RUtils.o Rcatalog.o Utils.o XMLEventParse.o XMLHashTree.o XMLTree.o fixNS.o libxmlFeatures.o schema.o xmlsecurity.o xpath.o -L/sw/lib -lxml2 -lz -lpthread -L/sw/lib -liconv -lm -lz -lxml2 -L/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/lib -lR -lintl -Wl,-framework -Wl,CoreFoundation
installing to /sw/build.build/root-cran-xml-r215-3.98-1.1-1/sw/lib/R/2.15/site-library/XML/libs
** R
** inst
** preparing package for lazy loading
Creating a generic function for 'source' from package 'base' in package 'XML'
in method for 'xmlAttrsToDataFrame' with signature '"AsIs"': no definition for class "AsIs"
in method for 'readKeyValueDB' with signature '"AsIs"': no definition for class "AsIs"
in method for 'readSolrDoc' with signature '"AsIs"': no definition for class "AsIs"
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (XML)
install_name_tool -id /sw/lib/R/2.15/site-library/XML/libs/XML.dylib /sw/build.build/root-cran-xml-r215-3.98-1.1-1/sw/lib/R/2.15/site-library/XML/libs/XML.dylib
sudo -u fink-bld [ENV] sh -c /tmp/fink.6bXIP
/bin/rm -f /sw/build.build/root-cran-xml-r215-3.98-1.1-1/sw/info/dir /sw/build.build/root-cran-xml-r215-3.98-1.1-1/sw/info/dir.old /sw/build.build/root-cran-xml-r215-3.98-1.1-1/sw/share/info/dir /sw/build.build/root-cran-xml-r215-3.98-1.1-1/sw/share/info/dir.old
Reverting ownership of install dir to root
Writing control file...
Creating shlibs files...
Writing md5sums file...
env LANG=C LC_ALL=C dpkg-deb -b root-cran-xml-r215-3.98-1.1-1 /sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods
dpkg-deb: building package `cran-xml-r215' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods/cran-xml-r215_3.98-1.1-1_darwin-x86_64.deb'.
Removing runtime build-lock...
Removing build-lock package...
/sw/bin/dpkg-lockwait -r fink-buildlock-cran-xml-r215-3.98-1.1-1
(Reading database ... 7944 files and directories currently installed.)
Removing fink-buildlock-cran-xml-r215-3.98-1.1-1 ...