printf ' ' | fink --no-use-binary-dist --yes --build-as-nobody rebuild cran-zoo-r215 2>&1 The package 'cran-zoo-r215' will be built without being installed. Reading build dependency for cran-zoo-r215-1.7-11-2... Reading dependency for cran-zoo-r215-1.7-11-2... Reading build conflict for cran-zoo-r215-1.7-11-2... The package 'r-base215-dev' will be installed. Reading dependency for r-base215-dev-2.15.3-112... Reading runtime dependency for r-base215-dev-2.15.3-112... The package 'r-base215' will be installed. Reading dependency for r-base215-2.15.3-112... Reading runtime dependency for r-base215-2.15.3-112... The package 'cran-lattice-r215' will be installed. Reading dependency for cran-lattice-r215-0.20-29-2... Reading runtime dependency for cran-lattice-r215-0.20-29-2... The package 'r-base215-shlibs' will be installed. Reading dependency for r-base215-shlibs-2.15.3-112... Reading runtime dependency for r-base215-shlibs-2.15.3-112... The following package will be rebuilt: cran-zoo-r215 The following 4 additional packages will be installed: cran-lattice-r215 r-base215 r-base215-dev r-base215-shlibs Do you want to continue? [Y/n] (assuming default) Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/r-base215_2.15.3-112_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base215-shlibs_2.15.3-112_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base215-dev_2.15.3-112_darwin-x86_64.deb Selecting previously deselected package r-base215. (Reading database ... 7371 files and directories currently installed.) Unpacking r-base215 (from .../r-base215_2.15.3-112_darwin-x86_64.deb) ... Selecting previously deselected package r-base215-shlibs. Unpacking r-base215-shlibs (from .../r-base215-shlibs_2.15.3-112_darwin-x86_64.deb) ... Selecting previously deselected package r-base215-dev. dpkg: considering removing r-base31-dev in favour of r-base215-dev ... dpkg: yes, will remove r-base31-dev in favour of r-base215-dev. Unpacking r-base215-dev (from .../r-base215-dev_2.15.3-112_darwin-x86_64.deb) ... Setting up r-base215-shlibs (2.15.3-112) ... Setting up r-base215-dev (2.15.3-112) ... Setting up r-base215 (2.15.3-112) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/cran-lattice-r215_0.20-29-2_darwin-x86_64.deb Selecting previously deselected package cran-lattice-r215. (Reading database ... 9473 files and directories currently installed.) Unpacking cran-lattice-r215 (from .../cran-lattice-r215_0.20-29-2_darwin-x86_64.deb) ... Setting up cran-lattice-r215 (0.20-29-2) ... Setting runtime build-lock... dpkg-deb -b /sw/build.build/root-fink-buildlock-cran-zoo-r215-1.7-11-2 /sw/build.build dpkg-deb: building package `fink-buildlock-cran-zoo-r215-1.7-11-2' in `/sw/build.build/fink-buildlock-cran-zoo-r215-1.7-11-2_2014.07.27-10.20.46_darwin-x86_64.deb'. Installing build-lock package... /sw/bin/dpkg-lockwait -i /sw/build.build/fink-buildlock-cran-zoo-r215-1.7-11-2_2014.07.27-10.20.46_darwin-x86_64.deb Selecting previously deselected package fink-buildlock-cran-zoo-r215-1.7-11-2. (Reading database ... 9530 files and directories currently installed.) Unpacking fink-buildlock-cran-zoo-r215-1.7-11-2 (from .../fink-buildlock-cran-zoo-r215-1.7-11-2_2014.07.27-10.20.46_darwin-x86_64.deb) ... Setting up fink-buildlock-cran-zoo-r215-1.7-11-2 (2014.07.27-10.20.46) ... sudo -u fink-bld [ENV] sh -c /tmp/fink.1Lu0j env LANG=C LC_ALL=C /sw/bin/tar --no-same-owner --no-same-permissions -xvf /sw/src/zoo_1.7-11.tar.gz zoo/ zoo/inst/ zoo/inst/TODO zoo/inst/WISHLIST zoo/inst/CITATION zoo/inst/THANKS zoo/inst/doc/ zoo/inst/doc/zoo-quickref.R zoo/inst/doc/zoo-quickref.pdf zoo/inst/doc/sunw.rda zoo/inst/doc/zoo-design.R zoo/inst/doc/zoo.Rnw zoo/inst/doc/zoo-faq.Rnw zoo/inst/doc/zoo-design.Rnw zoo/inst/doc/MSFT.rda zoo/inst/doc/zoo-read.Rnw zoo/inst/doc/zoo-faq.R zoo/inst/doc/zoo-faq.pdf zoo/inst/doc/zoo-design.pdf zoo/inst/doc/zoo-read.pdf zoo/inst/doc/zoo-read.R zoo/inst/doc/zoo.pdf zoo/inst/doc/demo1.txt zoo/inst/doc/demo2.txt zoo/inst/doc/zoo-quickref.Rnw zoo/tests/ zoo/tests/as.Date.R zoo/tests/Examples/ zoo/tests/Examples/zoo-Ex.Rout.save zoo/tests/vignette-zoo-quickref.R zoo/tests/bugfixes.Rout.save zoo/tests/vignette-zoo.R zoo/tests/vignette-zoo.Rout.save zoo/tests/vignette-zoo-quickref.Rout.save zoo/tests/as.Date.Rout.save zoo/tests/bugfixes.R zoo/src/ zoo/src/lag.c zoo/src/coredata.c zoo/src/zoo.h zoo/src/init.c zoo/NAMESPACE zoo/demo/ zoo/demo/zoo-overplot.R zoo/demo/00Index zoo/NEWS zoo/R/ zoo/R/merge.zoo.R zoo/R/read.zoo.R zoo/R/barplot.zoo.R zoo/R/window.zoo.R zoo/R/na.spline.R zoo/R/na.aggregate.R zoo/R/na.fill.R zoo/R/is.regular.R zoo/R/na.trim.R zoo/R/plot.zoo.R zoo/R/rollmean.R zoo/R/as.zoo.R zoo/R/rollapply.R zoo/R/as.Date.R zoo/R/aggregate.zoo.R zoo/R/zoo.R zoo/R/ggplot2.zoo.R zoo/R/coredata.R zoo/R/yearmon.R zoo/R/yearqtr.R zoo/R/as.zoo.tis.R zoo/R/xblocks.R zoo/R/index.R zoo/R/index2char.R zoo/R/na.approx.R zoo/R/MATCH.R zoo/R/as.Date.ts.R zoo/R/na.locf.R zoo/R/zooreg.R zoo/R/ORDER.R zoo/R/xyplot.zoo.R zoo/R/Ops.zoo.R zoo/R/na.StructTS.R zoo/vignettes/ zoo/vignettes/sunw.rda zoo/vignettes/zoo.Rnw zoo/vignettes/zoo-faq.Rnw zoo/vignettes/.install_extras zoo/vignettes/zoo-refcard.tex zoo/vignettes/zoo-design.Rnw zoo/vignettes/MSFT.rda zoo/vignettes/zoo-read.Rnw zoo/vignettes/zoo-refcard-raw.tex zoo/vignettes/zoo.bib zoo/vignettes/demo1.txt zoo/vignettes/demo2.txt zoo/vignettes/zoo-refcard.pdf zoo/vignettes/zoo-quickref.Rnw zoo/MD5 zoo/build/ zoo/build/vignette.rds zoo/DESCRIPTION zoo/man/ zoo/man/xblocks.Rd zoo/man/read.zoo.Rd zoo/man/na.approx.Rd zoo/man/yearqtr.Rd zoo/man/zooreg.Rd zoo/man/lag.zoo.Rd zoo/man/plot.zoo.Rd zoo/man/aggregate.zoo.Rd zoo/man/frequency.Rd zoo/man/MATCH.Rd zoo/man/index.Rd zoo/man/rollapply.Rd zoo/man/na.fill.Rd zoo/man/na.StructTS.Rd zoo/man/na.locf.Rd zoo/man/is.regular.Rd zoo/man/yearmon.Rd zoo/man/ggplot2.zoo.Rd zoo/man/coredata.Rd zoo/man/ORDER.Rd zoo/man/make.par.list.Rd zoo/man/zoo.Rd zoo/man/xyplot.zoo.Rd zoo/man/na.aggregate.Rd zoo/man/window.zoo.Rd zoo/man/rollmean.Rd zoo/man/as.zoo.Rd zoo/man/na.trim.Rd zoo/man/merge.zoo.Rd sudo -u fink-bld [ENV] sh -c /tmp/fink.C28wX /tmp/fink.C3vR9 #!/bin/sh -ev export TMPDIR=/sw/build.build/cran-zoo-r215-1.7-11-2/zoo/tmp BIN_R=/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R pushd .. /sw/build.build/cran-zoo-r215-1.7-11-2 /sw/build.build/cran-zoo-r215-1.7-11-2/zoo if [[ 2.15 > 2.15 ]]; then $BIN_R --verbose CMD build --no-build-vignettes zoo else $BIN_R --verbose CMD build --no-vignettes zoo fi WARNING: ignoring environment value of R_HOME * checking for file 'zoo/DESCRIPTION' ... OK * preparing 'zoo': * checking DESCRIPTION meta-information ... OK * cleaning src * checking for LF line-endings in source and make files * checking for empty or unneeded directories * building 'zoo_1.7-11.tar.gz' /bin/rm -rf /sw/build.build/root-cran-zoo-r215-1.7-11-2 /bin/mkdir -p /sw/build.build/root-cran-zoo-r215-1.7-11-2/sw /bin/mkdir -p /sw/build.build/root-cran-zoo-r215-1.7-11-2/DEBIAN /usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-cran-zoo-r215-1.7-11-2 sudo -u fink-bld [ENV] sh -c /tmp/fink.0Fydd /tmp/fink.DTJ5D #!/bin/sh -ev BIN_R=/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R mkdir -p /sw/build.build/root-cran-zoo-r215-1.7-11-2/sw/lib/R/2.15/site-library pushd /sw/build.build/cran-zoo-r215-1.7-11-2/zoo/.. && $BIN_R --verbose CMD install --library=/sw/build.build/root-cran-zoo-r215-1.7-11-2/sw/lib/R/2.15/site-library zoo /sw/build.build/cran-zoo-r215-1.7-11-2 /sw/build.build/cran-zoo-r215-1.7-11-2/zoo WARNING: ignoring environment value of R_HOME * installing *source* package 'zoo' ... ** package 'zoo' successfully unpacked and MD5 sums checked ** libs flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -I/sw/include -fPIC -g -O3 -c coredata.c -o coredata.o flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -I/sw/include -fPIC -g -O3 -c init.c -o init.o flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/include -DNDEBUG -I/sw/include -fPIC -g -O3 -c lag.c -o lag.o flag-sort -r gcc -ffor-scope -dynamiclib -Wl,-headerpad_max_install_names -single_module -multiply_defined suppress -L/sw/lib -o zoo.dylib coredata.o init.o lag.o -L/sw/Library/Frameworks/R.framework/Versions/2.15/Resources/lib -lR -lintl -Wl,-framework -Wl,CoreFoundation installing to /sw/build.build/root-cran-zoo-r215-1.7-11-2/sw/lib/R/2.15/site-library/zoo/libs ** R ** demo ** inst ** preparing package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes 'zoo-design.Rnw' 'zoo-faq.Rnw' 'zoo-quickref.Rnw' 'zoo-read.Rnw' 'zoo.Rnw' ** testing if installed package can be loaded * DONE (zoo) install_name_tool -id /sw/lib/R/2.15/site-library/zoo/libs/zoo.dylib /sw/build.build/root-cran-zoo-r215-1.7-11-2/sw/lib/R/2.15/site-library/zoo/libs/zoo.dylib sudo -u fink-bld [ENV] sh -c /tmp/fink.hZ1VA /bin/rm -f /sw/build.build/root-cran-zoo-r215-1.7-11-2/sw/info/dir /sw/build.build/root-cran-zoo-r215-1.7-11-2/sw/info/dir.old /sw/build.build/root-cran-zoo-r215-1.7-11-2/sw/share/info/dir /sw/build.build/root-cran-zoo-r215-1.7-11-2/sw/share/info/dir.old Reverting ownership of install dir to root Writing control file... Creating shlibs files... Writing md5sums file... env LANG=C LC_ALL=C dpkg-deb -b root-cran-zoo-r215-1.7-11-2 /sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods dpkg-deb: building package `cran-zoo-r215' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods/cran-zoo-r215_1.7-11-2_darwin-x86_64.deb'. Removing runtime build-lock... Removing build-lock package... /sw/bin/dpkg-lockwait -r fink-buildlock-cran-zoo-r215-1.7-11-2 (Reading database ... 9531 files and directories currently installed.) Removing fink-buildlock-cran-zoo-r215-1.7-11-2 ...