printf ' ' | fink --no-use-binary-dist --yes rebuild ghemical 2>&1 The package 'ghemical' will be built without being installed. Reading build dependency for ghemical-2.99.2-1005... Reading dependency for ghemical-2.99.2-1005... Reading build conflict for ghemical-2.99.2-1005... The following package will be rebuilt: ghemical Setting runtime build-lock... dpkg-deb -b /sw/build.build/root-fink-buildlock-ghemical-2.99.2-1005 /sw/build.build dpkg-deb: building package `fink-buildlock-ghemical-2.99.2-1005' in `/sw/build.build/fink-buildlock-ghemical-2.99.2-1005_2014.08.04-06.36.24_darwin-x86_64.deb'. Installing build-lock package... /sw/bin/dpkg-lockwait -i /sw/build.build/fink-buildlock-ghemical-2.99.2-1005_2014.08.04-06.36.24_darwin-x86_64.deb Selecting previously deselected package fink-buildlock-ghemical-2.99.2-1005. (Reading database ... 11702 files and directories currently installed.) Unpacking fink-buildlock-ghemical-2.99.2-1005 (from .../fink-buildlock-ghemical-2.99.2-1005_2014.08.04-06.36.24_darwin-x86_64.deb) ... Setting up fink-buildlock-ghemical-2.99.2-1005 (2014.08.04-06.36.24) ... sudo -u fink-bld [ENV] sh -c /tmp/fink.8gsZ9 env LANG=C LC_ALL=C /sw/bin/tar --no-same-owner --no-same-permissions -xvf /sw/src/ghemical-2.99.2.tar.gz ghemical-2.99.2/ ghemical-2.99.2/ChangeLog ghemical-2.99.2/Makefile.am ghemical-2.99.2/po/ ghemical-2.99.2/po/ChangeLog ghemical-2.99.2/po/LINGUAS ghemical-2.99.2/po/mk.po ghemical-2.99.2/po/pt_BR.po ghemical-2.99.2/po/POTFILES.in ghemical-2.99.2/po/fi.po ghemical-2.99.2/po/sq.po ghemical-2.99.2/po/Makefile.in.in ghemical-2.99.2/INSTALL ghemical-2.99.2/NEWS ghemical-2.99.2/missing ghemical-2.99.2/install-sh ghemical-2.99.2/depcomp ghemical-2.99.2/AUTHORS ghemical-2.99.2/TODO ghemical-2.99.2/acinclude.m4 ghemical-2.99.2/COPYING ghemical-2.99.2/ghemical.spec ghemical-2.99.2/aclocal.m4 ghemical-2.99.2/Makefile.in ghemical-2.99.2/docs/ ghemical-2.99.2/docs/Makefile.am ghemical-2.99.2/docs/user-docs/ ghemical-2.99.2/docs/user-docs/Makefile.am ghemical-2.99.2/docs/user-docs/add_hydrogens.html ghemical-2.99.2/docs/user-docs/index.html ghemical-2.99.2/docs/user-docs/MD_viewer.html ghemical-2.99.2/docs/user-docs/measure.html ghemical-2.99.2/docs/user-docs/images/ ghemical-2.99.2/docs/user-docs/images/Makefile.am ghemical-2.99.2/docs/user-docs/images/using_mm_08.png ghemical-2.99.2/docs/user-docs/images/md_dialog.png ghemical-2.99.2/docs/user-docs/images/aa_builder_ci.png ghemical-2.99.2/docs/user-docs/images/setup1.png ghemical-2.99.2/docs/user-docs/images/cyclohexane1.png ghemical-2.99.2/docs/user-docs/images/using_mm_11.png ghemical-2.99.2/docs/user-docs/images/modal.png ghemical-2.99.2/docs/user-docs/images/optimized_ethane.png ghemical-2.99.2/docs/user-docs/images/toplevel.png ghemical-2.99.2/docs/user-docs/images/aa_builder_w_h.png ghemical-2.99.2/docs/user-docs/images/using_mm_07.png ghemical-2.99.2/docs/user-docs/images/esp-plane_qm.png ghemical-2.99.2/docs/user-docs/images/clipping2.png ghemical-2.99.2/docs/user-docs/images/aa_builder_menu.png ghemical-2.99.2/docs/user-docs/images/cyclohexane_optimized.png ghemical-2.99.2/docs/user-docs/images/using_mm_02.png ghemical-2.99.2/docs/user-docs/images/ci_plane.png ghemical-2.99.2/docs/user-docs/images/energy_vs_torsion4.png ghemical-2.99.2/docs/user-docs/images/Makefile.in ghemical-2.99.2/docs/user-docs/images/energy_vs_torsion1.png ghemical-2.99.2/docs/user-docs/images/energy_vs_torsion2.png ghemical-2.99.2/docs/user-docs/images/cyclohexane_unoptimized.png ghemical-2.99.2/docs/user-docs/images/setup_select.png ghemical-2.99.2/docs/user-docs/images/add_hydrogens_select.png ghemical-2.99.2/docs/user-docs/images/esp-plane_mm.png ghemical-2.99.2/docs/user-docs/images/mainmenu.png ghemical-2.99.2/docs/user-docs/images/esp-plane_select.png ghemical-2.99.2/docs/user-docs/images/ribbon.png ghemical-2.99.2/docs/user-docs/images/setup2.png ghemical-2.99.2/docs/user-docs/images/traj_dialog.png ghemical-2.99.2/docs/user-docs/images/using_mm_03.png ghemical-2.99.2/docs/user-docs/images/2atoms_unbonded.png ghemical-2.99.2/docs/user-docs/images/using_mm_01.png ghemical-2.99.2/docs/user-docs/images/using_mm_10.png ghemical-2.99.2/docs/user-docs/images/sequence_builder.png ghemical-2.99.2/docs/user-docs/images/energy_vs_torsion3.png ghemical-2.99.2/docs/user-docs/images/formula.png ghemical-2.99.2/docs/user-docs/images/enlevdiag.png ghemical-2.99.2/docs/user-docs/images/geometry_op_dialog.png ghemical-2.99.2/docs/user-docs/images/notebook.png ghemical-2.99.2/docs/user-docs/images/aa_builder_note.png ghemical-2.99.2/docs/user-docs/images/remove_hydrogens.png ghemical-2.99.2/docs/user-docs/images/change_bond_dialog.png ghemical-2.99.2/docs/user-docs/images/aa_builder_wo_h.png ghemical-2.99.2/docs/user-docs/images/using_mm_05.png ghemical-2.99.2/docs/user-docs/images/using_mm_06.png ghemical-2.99.2/docs/user-docs/images/using_mm_04.png ghemical-2.99.2/docs/user-docs/images/cyclohexane2.png ghemical-2.99.2/docs/user-docs/images/esp-plane_select_obj.png ghemical-2.99.2/docs/user-docs/images/formula_select.png ghemical-2.99.2/docs/user-docs/images/add_hydrogens.png ghemical-2.99.2/docs/user-docs/images/maintools.png ghemical-2.99.2/docs/user-docs/images/using_mm_09.png ghemical-2.99.2/docs/user-docs/images/geometry_optimization_select.png ghemical-2.99.2/docs/user-docs/images/clipping1.png ghemical-2.99.2/docs/user-docs/images/labels_menu.png ghemical-2.99.2/docs/user-docs/images/window.png ghemical-2.99.2/docs/user-docs/using_qm.html ghemical-2.99.2/docs/user-docs/Makefile.in ghemical-2.99.2/docs/user-docs/introduction.html ghemical-2.99.2/docs/user-docs/references.html ghemical-2.99.2/docs/user-docs/MD.html ghemical-2.99.2/docs/user-docs/filetypes.html ghemical-2.99.2/docs/user-docs/using_sf.html ghemical-2.99.2/docs/user-docs/geometry_optimization.html ghemical-2.99.2/docs/user-docs/visualization.html ghemical-2.99.2/docs/user-docs/aa_table.html ghemical-2.99.2/docs/user-docs/setup_dialog.html ghemical-2.99.2/docs/user-docs/documentation.css ghemical-2.99.2/docs/user-docs/sequence_builder.html ghemical-2.99.2/docs/user-docs/energy_vs_torsion.html ghemical-2.99.2/docs/user-docs/perspective.html ghemical-2.99.2/docs/user-docs/conf_search_tools.html ghemical-2.99.2/docs/user-docs/ribbon.html ghemical-2.99.2/docs/user-docs/labels.html ghemical-2.99.2/docs/user-docs/formula.html ghemical-2.99.2/docs/user-docs/using_mm.html ghemical-2.99.2/docs/user-docs/import_types.html ghemical-2.99.2/docs/Makefile.in ghemical-2.99.2/configure.ac ghemical-2.99.2/examples/ ghemical-2.99.2/examples/Makefile.am ghemical-2.99.2/examples/cyclohexane.gpr ghemical-2.99.2/examples/PeriodicTable.gpr ghemical-2.99.2/examples/cis-2-pentene.gpr ghemical-2.99.2/examples/naphtalene.gpr ghemical-2.99.2/examples/acetylsalicylic_acid.gpr ghemical-2.99.2/examples/rna_aguc.gpr ghemical-2.99.2/examples/Makefile.in ghemical-2.99.2/examples/camphor.gpr ghemical-2.99.2/examples/dna_AGTC.gpr ghemical-2.99.2/examples/bromobenzene.gpr ghemical-2.99.2/examples/alpha-pinene.gpr ghemical-2.99.2/examples/2-chlorobutane.gpr ghemical-2.99.2/examples/3-phenylpropanal.gpr ghemical-2.99.2/examples/TSS/ ghemical-2.99.2/examples/TSS/Makefile.am ghemical-2.99.2/examples/TSS/sigmatropic_rearrangement_Cope/ ghemical-2.99.2/examples/TSS/sigmatropic_rearrangement_Cope/Makefile.am ghemical-2.99.2/examples/TSS/sigmatropic_rearrangement_Cope/products.gpr ghemical-2.99.2/examples/TSS/sigmatropic_rearrangement_Cope/Makefile.in ghemical-2.99.2/examples/TSS/sigmatropic_rearrangement_Cope/reactants.gpr ghemical-2.99.2/examples/TSS/sigmatropic_rearrangement_Cope/ts.gpr ghemical-2.99.2/examples/TSS/Makefile.in ghemical-2.99.2/examples/TSS/carbocation_rearrangement_methide_shift/ ghemical-2.99.2/examples/TSS/carbocation_rearrangement_methide_shift/Makefile.am ghemical-2.99.2/examples/TSS/carbocation_rearrangement_methide_shift/products.gpr ghemical-2.99.2/examples/TSS/carbocation_rearrangement_methide_shift/Makefile.in ghemical-2.99.2/examples/TSS/carbocation_rearrangement_methide_shift/reactants.gpr ghemical-2.99.2/examples/TSS/carbocation_rearrangement_methide_shift/ts.gpr ghemical-2.99.2/examples/TSS/carbocation_rearrangement_hydride_shift/ ghemical-2.99.2/examples/TSS/carbocation_rearrangement_hydride_shift/Makefile.am ghemical-2.99.2/examples/TSS/carbocation_rearrangement_hydride_shift/products.gpr ghemical-2.99.2/examples/TSS/carbocation_rearrangement_hydride_shift/Makefile.in ghemical-2.99.2/examples/TSS/carbocation_rearrangement_hydride_shift/reactants.gpr ghemical-2.99.2/examples/TSS/carbocation_rearrangement_hydride_shift/ts.gpr ghemical-2.99.2/examples/TSS/SN2-reaction/ ghemical-2.99.2/examples/TSS/SN2-reaction/Makefile.am ghemical-2.99.2/examples/TSS/SN2-reaction/products.gpr ghemical-2.99.2/examples/TSS/SN2-reaction/Makefile.in ghemical-2.99.2/examples/TSS/SN2-reaction/reactants.gpr ghemical-2.99.2/examples/TSS/SN2-reaction/ts.gpr ghemical-2.99.2/examples/TSS/cycloaddition_Diels-Alder/ ghemical-2.99.2/examples/TSS/cycloaddition_Diels-Alder/Makefile.am ghemical-2.99.2/examples/TSS/cycloaddition_Diels-Alder/products.gpr ghemical-2.99.2/examples/TSS/cycloaddition_Diels-Alder/Makefile.in ghemical-2.99.2/examples/TSS/cycloaddition_Diels-Alder/reactants.gpr ghemical-2.99.2/examples/TSS/cycloaddition_Diels-Alder/ts.gpr ghemical-2.99.2/examples/TSS/README ghemical-2.99.2/examples/TSS/tautomeric_shift_keto_enol/ ghemical-2.99.2/examples/TSS/tautomeric_shift_keto_enol/Makefile.am ghemical-2.99.2/examples/TSS/tautomeric_shift_keto_enol/products.gpr ghemical-2.99.2/examples/TSS/tautomeric_shift_keto_enol/Makefile.in ghemical-2.99.2/examples/TSS/tautomeric_shift_keto_enol/reactants.gpr ghemical-2.99.2/examples/TSS/tautomeric_shift_keto_enol/ts.gpr ghemical-2.99.2/examples/TSS/E2-reaction/ ghemical-2.99.2/examples/TSS/E2-reaction/Makefile.am ghemical-2.99.2/examples/TSS/E2-reaction/products.gpr ghemical-2.99.2/examples/TSS/E2-reaction/Makefile.in ghemical-2.99.2/examples/TSS/E2-reaction/reactants.gpr ghemical-2.99.2/examples/TSS/E2-reaction/ts.gpr ghemical-2.99.2/examples/cinnamaldehyde.gpr ghemical-2.99.2/autogen.sh ghemical-2.99.2/ltmain.sh ghemical-2.99.2/README ghemical-2.99.2/src/ ghemical-2.99.2/src/Makefile.am ghemical-2.99.2/src/filetrans.cpp ghemical-2.99.2/src/gtk_p2dview_wnd.h ghemical-2.99.2/src/gtk_moldyn_dialog.h ghemical-2.99.2/src/gtk_rcpview_wnd.h ghemical-2.99.2/src/gtk_gpcview_wnd.cpp ghemical-2.99.2/src/gtk_p1dview_wnd.h ghemical-2.99.2/src/oglview_wcl.cpp ghemical-2.99.2/src/custom_lights.cpp ghemical-2.99.2/src/eldview_wcl.cpp ghemical-2.99.2/src/gtk_moldyn_dialog.cpp ghemical-2.99.2/src/p1dview_wcl.h ghemical-2.99.2/src/gtk_file_import_dialog.h ghemical-2.99.2/src/gtk_eldview_wnd.h ghemical-2.99.2/src/custom_lights.h ghemical-2.99.2/src/res_gtk/ ghemical-2.99.2/src/res_gtk/orbit_z.xpm ghemical-2.99.2/src/res_gtk/Makefile.am ghemical-2.99.2/src/res_gtk/molecule.xpm ghemical-2.99.2/src/res_gtk/orbit_xy.xpm ghemical-2.99.2/src/res_gtk/select.xpm ghemical-2.99.2/src/res_gtk/clipping.xpm ghemical-2.99.2/src/res_gtk/residue.xpm ghemical-2.99.2/src/res_gtk/measure.xpm ghemical-2.99.2/src/res_gtk/dihedral.xpm ghemical-2.99.2/src/res_gtk/rotate_xy.xpm ghemical-2.99.2/src/res_gtk/rotate_z.xpm ghemical-2.99.2/src/res_gtk/bond.xpm ghemical-2.99.2/src/res_gtk/Makefile.in ghemical-2.99.2/src/res_gtk/chain.xpm ghemical-2.99.2/src/res_gtk/gtk_file_export_dialog.glade ghemical-2.99.2/src/res_gtk/setup.xpm ghemical-2.99.2/src/res_gtk/draw.xpm ghemical-2.99.2/src/res_gtk/gtk_progress_dialog.glade ghemical-2.99.2/src/res_gtk/angle.xpm ghemical-2.99.2/src/res_gtk/gtk_setup_dialog.glade ghemical-2.99.2/src/res_gtk/ghemical.png ghemical-2.99.2/src/res_gtk/transl_xy.xpm ghemical-2.99.2/src/res_gtk/gtk_moldyn_dialog.glade ghemical-2.99.2/src/res_gtk/gtk_file_import_dialog.glade ghemical-2.99.2/src/res_gtk/erase.xpm ghemical-2.99.2/src/res_gtk/gtk_stereo_dialog.glade ghemical-2.99.2/src/res_gtk/distance.xpm ghemical-2.99.2/src/res_gtk/gtk_trajview_dialog.glade ghemical-2.99.2/src/res_gtk/element.xpm ghemical-2.99.2/src/res_gtk/bondtype.xpm ghemical-2.99.2/src/res_gtk/gtk_geomopt_dialog.glade ghemical-2.99.2/src/res_gtk/invert.xpm ghemical-2.99.2/src/res_gtk/transl_z.xpm ghemical-2.99.2/src/res_gtk/zoom.xpm ghemical-2.99.2/src/Makefile.in ghemical-2.99.2/src/gtk_p1dview_wnd.cpp ghemical-2.99.2/src/oglview_wcl.h ghemical-2.99.2/src/gtk_app.h ghemical-2.99.2/src/fileio.cpp ghemical-2.99.2/src/gtk_file_export_dialog.h ghemical-2.99.2/src/gtk_project.h ghemical-2.99.2/src/gtk_trajview_dialog.cpp ghemical-2.99.2/src/gtk_eldview_wnd.cpp ghemical-2.99.2/src/gtk_progress_dialog.cpp ghemical-2.99.2/src/gtk_oglview_wnd.h ghemical-2.99.2/src/gtk_simple_dialogs.cpp ghemical-2.99.2/src/pangofont_wcl.h ghemical-2.99.2/src/custom_camera.h ghemical-2.99.2/src/gtk_stereo_dialog.cpp ghemical-2.99.2/src/gtk_app.cpp ghemical-2.99.2/src/spline.cpp ghemical-2.99.2/src/gtk_wnd.h ghemical-2.99.2/src/gtk_setup_dialog.h ghemical-2.99.2/src/gtk_glade_dialog.h ghemical-2.99.2/src/gtk_setup_dialog.cpp ghemical-2.99.2/src/gtk_wnd.cpp ghemical-2.99.2/src/ogl_surface.h ghemical-2.99.2/src/gtk_simple_dialogs.h ghemical-2.99.2/src/p2dview_wcl.h ghemical-2.99.2/src/ogl_ribbon.cpp ghemical-2.99.2/src/gtk_geomopt_dialog.h ghemical-2.99.2/src/gtk_stereo_dialog.h ghemical-2.99.2/src/gtk_glade_dialog.cpp ghemical-2.99.2/src/gtk_rcpview_wnd.cpp ghemical-2.99.2/src/project.h ghemical-2.99.2/src/gtk_main.cpp ghemical-2.99.2/src/spline.h ghemical-2.99.2/src/ac_stor_wcl.cpp ghemical-2.99.2/src/custom_app.cpp ghemical-2.99.2/src/gtk_trajview_dialog.h ghemical-2.99.2/src/gtk_file_export_dialog.cpp ghemical-2.99.2/src/gpcview_wcl.cpp ghemical-2.99.2/src/gtk_geomopt_dialog.cpp ghemical-2.99.2/src/gtk_progress_dialog.h ghemical-2.99.2/src/rcpview_wcl.cpp ghemical-2.99.2/src/gtk_p2dview_wnd.cpp ghemical-2.99.2/src/rcpview_wcl.h ghemical-2.99.2/src/ac_stor_wcl.h ghemical-2.99.2/src/p2dview_wcl.cpp ghemical-2.99.2/src/project.cpp ghemical-2.99.2/src/local_i18n.h ghemical-2.99.2/src/ogl_ribbon.h ghemical-2.99.2/src/appdefine.h ghemical-2.99.2/src/ogl_plane.h ghemical-2.99.2/src/color.h ghemical-2.99.2/src/gpcview_wcl.h ghemical-2.99.2/src/gtk_file_import_dialog.cpp ghemical-2.99.2/src/pangofont_wcl.cpp ghemical-2.99.2/src/gtk_project.cpp ghemical-2.99.2/src/ogl_plane.cpp ghemical-2.99.2/src/eldview_wcl.h ghemical-2.99.2/src/filetrans.h ghemical-2.99.2/src/gtk_oglview_wnd.cpp ghemical-2.99.2/src/custom_camera.cpp ghemical-2.99.2/src/ogl_surface.cpp ghemical-2.99.2/src/ghemicalconfig.h.in ghemical-2.99.2/src/gtk_gpcview_wnd.h ghemical-2.99.2/src/gtk_main.h ghemical-2.99.2/src/custom_app.h ghemical-2.99.2/src/p1dview_wcl.cpp ghemical-2.99.2/config.guess ghemical-2.99.2/configure ghemical-2.99.2/config.sub ghemical-2.99.2/mkinstalldirs sudo -u fink-bld [ENV] sh -c /tmp/fink.fEB4p perl -pi -e 's,-g -O,-O,g;s,-O2,-Os,g' configure perl -pi -e 's/mozilla/firefox/' src/gtk_app.cpp sudo -u fink-bld [ENV] sh -c /tmp/fink.lVswC ./configure --prefix=/sw --mandir=/sw/share/man --enable-dependency-tracking --enable-gtk --enable-threads --enable-openbabel checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for gawk... no checking for mawk... no checking for nawk... no checking for awk... awk checking whether make sets $(MAKE)... yes checking build system type... i386-apple-darwin13.3.0 checking host system type... i386-apple-darwin13.3.0 checking for gcc... gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for style of include used by make... GNU checking dependency style of gcc... gcc3 checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking how to run the C preprocessor... gcc -E checking how to run the C++ preprocessor... g++ -E checking for a BSD-compatible install... /usr/bin/install -c checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ld used by gcc... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no checking for /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld option to reload object files... -r checking for BSD-compatible nm... /usr/bin/nm checking whether ln -s works... yes checking how to recognize dependent libraries... pass_all checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking dlfcn.h usability... yes checking dlfcn.h presence... yes checking for dlfcn.h... yes checking how to run the C++ preprocessor... g++ -E checking for g77... no checking for xlf... no checking for f77... no checking for frt... no checking for pgf77... no checking for cf77... no checking for fort77... no checking for fl32... no checking for af77... no checking for xlf90... no checking for f90... no checking for pgf90... no checking for pghpf... no checking for epcf90... no checking for gfortran... no checking for g95... no checking for xlf95... no checking for f95... no checking for fort... no checking for ifort... no checking for ifc... no checking for efc... no checking for pgf95... no checking for lf95... no checking for ftn... no checking whether we are using the GNU Fortran 77 compiler... no checking whether accepts -g... no checking the maximum length of command line arguments... 196608 checking command to parse /usr/bin/nm output from gcc object... ok checking for objdir... .libs checking for ar... ar checking for ranlib... ranlib checking for strip... strip checking for dsymutil... dsymutil checking for nmedit... nmedit checking for -single_module linker flag... yes checking for -exported_symbols_list linker flag... yes checking if gcc supports -fno-rtti -fno-exceptions... yes checking for gcc option to produce PIC... -fno-common checking if gcc PIC flag -fno-common works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking whether the gcc linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin13.3.0 dyld checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes configure: creating libtool appending configuration tag "CXX" to libtool checking for ld used by g++... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no checking whether the g++ linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fno-common checking if g++ PIC flag -fno-common works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking whether the g++ linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin13.3.0 dyld (cached) (cached) checking how to hardcode library paths into programs... immediate appending configuration tag "F77" to libtool checking for ar... /usr/bin/ar checking for sh... /bin/sh checking whether make sets $(MAKE)... (cached) yes checking for pkg-config... /sw/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for intltool >= 0.40.0... 0.50.2 found checking for intltool-update... /sw/bin/intltool-update checking for intltool-merge... /sw/bin/intltool-merge checking for intltool-extract... /sw/bin/intltool-extract checking for xgettext... /sw/bin/xgettext checking for msgmerge... /sw/bin/msgmerge checking for msgfmt... /sw/bin/msgfmt checking for perl... (cached) /usr/bin/perl checking for XML::Parser... ok checking locale.h usability... yes checking locale.h presence... yes checking for locale.h... yes checking for LC_MESSAGES... yes checking libintl.h usability... yes checking libintl.h presence... yes checking for libintl.h... yes checking for ngettext in libc... no checking for bindtextdomain in -lintl... yes checking for ngettext in -lintl... yes checking for dgettext in -lintl... yes checking for bind_textdomain_codeset... yes checking for msgfmt... (cached) /sw/bin/msgfmt checking for dcgettext... yes checking if msgfmt accepts -c... yes checking for gmsgfmt... /sw/bin/msgfmt checking for xgettext... (cached) /sw/bin/xgettext checking whether build environment is sane... yes checking for acos in -lm... yes checking for GTHREAD... yes checking for GTK... yes checking for OPENBABEL... yes checking for LIBGHEMICAL... yes checking GL/gl.h usability... yes checking GL/gl.h presence... yes checking for GL/gl.h... yes checking GL/glu.h usability... yes checking GL/glu.h presence... yes checking for GL/glu.h... yes checking for gcc option to accept ISO C99... none needed checking for gcc option to accept ISO Standard C... (cached) none needed checking for inline... inline checking for an ANSI C-conforming const... yes checking for ANSI C header files... (cached) yes configure: build options: ^^^^^^^^^^^^^^ enable gtk : yes enable threads : yes enable OpenBabel : yes configure: creating ./config.status config.status: creating Makefile config.status: creating docs/Makefile config.status: creating docs/user-docs/Makefile config.status: creating docs/user-docs/images/Makefile config.status: creating examples/Makefile config.status: creating examples/TSS/Makefile config.status: creating examples/TSS/carbocation_rearrangement_hydride_shift/Makefile config.status: creating examples/TSS/carbocation_rearrangement_methide_shift/Makefile config.status: creating examples/TSS/cycloaddition_Diels-Alder/Makefile config.status: creating examples/TSS/E2-reaction/Makefile config.status: creating examples/TSS/sigmatropic_rearrangement_Cope/Makefile config.status: creating examples/TSS/SN2-reaction/Makefile config.status: creating examples/TSS/tautomeric_shift_keto_enol/Makefile config.status: creating po/Makefile.in config.status: creating src/Makefile config.status: creating src/res_gtk/Makefile config.status: creating src/ghemicalconfig.h config.status: executing src/ghemicalconfig2.h commands config.status: executing depfiles commands config.status: executing default-1 commands config.status: executing stamp.h commands config.status: executing po/stamp-it commands make Making all in docs Making all in user-docs Making all in images make[3]: Nothing to be done for `all'. make[3]: Nothing to be done for `all-am'. make[2]: Nothing to be done for `all-am'. Making all in examples Making all in TSS Making all in carbocation_rearrangement_hydride_shift make[3]: Nothing to be done for `all'. Making all in carbocation_rearrangement_methide_shift make[3]: Nothing to be done for `all'. Making all in cycloaddition_Diels-Alder make[3]: Nothing to be done for `all'. Making all in E2-reaction make[3]: Nothing to be done for `all'. Making all in sigmatropic_rearrangement_Cope make[3]: Nothing to be done for `all'. Making all in SN2-reaction make[3]: Nothing to be done for `all'. Making all in tautomeric_shift_keto_enol make[3]: Nothing to be done for `all'. make[3]: Nothing to be done for `all-am'. make[2]: Nothing to be done for `all-am'. Making all in src /Applications/Xcode.app/Contents/Developer/usr/bin/make all-recursive Making all in res_gtk make[3]: Nothing to be done for `all'. if g++ -DHAVE_CONFIG_H -I. -I. -I. -DLOCALE_DIR=\""/sw/share/locale"\" -I/sw/include -I/sw/include/glib-2.0 -I/sw/lib/glib-2.0/include -I/sw/include/gtkglext-1.0 -I/sw/lib/gtkglext-1.0/include -I/sw/include/gtk-2.0 -I/sw/lib/gtk-2.0/include -I/sw/include/pango-1.0 -I/sw/include/libglade-2.0 -I/sw/include/gtk-2.0 -I/sw/lib/gtk-2.0/include -I/sw/include/gtk-2.0 -I/sw/include/pango-1.0 -I/sw/include/atk-1.0 -I/sw/include/cairo -I/sw/include/pango-1.0 -I/sw/include/glib-2.0 -I/sw/lib/glib-2.0/include -I/sw/include/freetype2 -I/sw/include -I/sw/include/libxml2 -I/sw/include -I/usr/X11R6/include -I/usr/X11R6/include -I/opt/X11/include -I/sw/include/openbabel-2.0 -I/sw/include/ghemical -I/sw/include/oglappth -Os -MT fileio.o -MD -MP -MF ".deps/fileio.Tpo" \ -c -o fileio.o `test -f 'fileio.cpp' || echo './'`fileio.cpp; \ then mv -f ".deps/fileio.Tpo" ".deps/fileio.Po"; \ else rm -f ".deps/fileio.Tpo"; exit 1; \ fi if g++ -DHAVE_CONFIG_H -I. -I. -I. -DLOCALE_DIR=\""/sw/share/locale"\" -I/sw/include -I/sw/include/glib-2.0 -I/sw/lib/glib-2.0/include -I/sw/include/gtkglext-1.0 -I/sw/lib/gtkglext-1.0/include -I/sw/include/gtk-2.0 -I/sw/lib/gtk-2.0/include -I/sw/include/pango-1.0 -I/sw/include/libglade-2.0 -I/sw/include/gtk-2.0 -I/sw/lib/gtk-2.0/include -I/sw/include/gtk-2.0 -I/sw/include/pango-1.0 -I/sw/include/atk-1.0 -I/sw/include/cairo -I/sw/include/pango-1.0 -I/sw/include/glib-2.0 -I/sw/lib/glib-2.0/include -I/sw/include/freetype2 -I/sw/include -I/sw/include/libxml2 -I/sw/include -I/usr/X11R6/include -I/usr/X11R6/include -I/opt/X11/include -I/sw/include/openbabel-2.0 -I/sw/include/ghemical -I/sw/include/oglappth -Os -MT filetrans.o -MD -MP -MF ".deps/filetrans.Tpo" \ -c -o filetrans.o `test -f 'filetrans.cpp' || echo './'`filetrans.cpp; \ then mv -f ".deps/filetrans.Tpo" ".deps/filetrans.Po"; \ else rm -f ".deps/filetrans.Tpo"; exit 1; \ fi if g++ -DHAVE_CONFIG_H -I. -I. -I. -DLOCALE_DIR=\""/sw/share/locale"\" -I/sw/include -I/sw/include/glib-2.0 -I/sw/lib/glib-2.0/include -I/sw/include/gtkglext-1.0 -I/sw/lib/gtkglext-1.0/include -I/sw/include/gtk-2.0 -I/sw/lib/gtk-2.0/include -I/sw/include/pango-1.0 -I/sw/include/libglade-2.0 -I/sw/include/gtk-2.0 -I/sw/lib/gtk-2.0/include -I/sw/include/gtk-2.0 -I/sw/include/pango-1.0 -I/sw/include/atk-1.0 -I/sw/include/cairo -I/sw/include/pango-1.0 -I/sw/include/glib-2.0 -I/sw/lib/glib-2.0/include -I/sw/include/freetype2 -I/sw/include -I/sw/include/libxml2 -I/sw/include -I/usr/X11R6/include -I/usr/X11R6/include -I/opt/X11/include -I/sw/include/openbabel-2.0 -I/sw/include/ghemical -I/sw/include/oglappth -Os -MT custom_app.o -MD -MP -MF ".deps/custom_app.Tpo" \ -c -o custom_app.o `test -f 'custom_app.cpp' || echo './'`custom_app.cpp; \ then mv -f ".deps/custom_app.Tpo" ".deps/custom_app.Po"; \ else rm -f ".deps/custom_app.Tpo"; exit 1; \ fi if g++ -DHAVE_CONFIG_H -I. -I. -I. -DLOCALE_DIR=\""/sw/share/locale"\" -I/sw/include -I/sw/include/glib-2.0 -I/sw/lib/glib-2.0/include -I/sw/include/gtkglext-1.0 -I/sw/lib/gtkglext-1.0/include -I/sw/include/gtk-2.0 -I/sw/lib/gtk-2.0/include -I/sw/include/pango-1.0 -I/sw/include/libglade-2.0 -I/sw/include/gtk-2.0 -I/sw/lib/gtk-2.0/include -I/sw/include/gtk-2.0 -I/sw/include/pango-1.0 -I/sw/include/atk-1.0 -I/sw/include/cairo -I/sw/include/pango-1.0 -I/sw/include/glib-2.0 -I/sw/lib/glib-2.0/include -I/sw/include/freetype2 -I/sw/include -I/sw/include/libxml2 -I/sw/include -I/usr/X11R6/include -I/usr/X11R6/include -I/opt/X11/include -I/sw/include/openbabel-2.0 -I/sw/include/ghemical -I/sw/include/oglappth -Os -MT custom_camera.o -MD -MP -MF ".deps/custom_camera.Tpo" \ -c -o custom_camera.o `test -f 'custom_camera.cpp' || echo './'`custom_camera.cpp; \ then mv -f ".deps/custom_camera.Tpo" ".deps/custom_camera.Po"; \ else rm -f ".deps/custom_camera.Tpo"; exit 1; \ fi if g++ -DHAVE_CONFIG_H -I. -I. -I. -DLOCALE_DIR=\""/sw/share/locale"\" -I/sw/include -I/sw/include/glib-2.0 -I/sw/lib/glib-2.0/include -I/sw/include/gtkglext-1.0 -I/sw/lib/gtkglext-1.0/include -I/sw/include/gtk-2.0 -I/sw/lib/gtk-2.0/include -I/sw/include/pango-1.0 -I/sw/include/libglade-2.0 -I/sw/include/gtk-2.0 -I/sw/lib/gtk-2.0/include -I/sw/include/gtk-2.0 -I/sw/include/pango-1.0 -I/sw/include/atk-1.0 -I/sw/include/cairo -I/sw/include/pango-1.0 -I/sw/include/glib-2.0 -I/sw/lib/glib-2.0/include -I/sw/include/freetype2 -I/sw/include -I/sw/include/libxml2 -I/sw/include -I/usr/X11R6/include -I/usr/X11R6/include -I/opt/X11/include -I/sw/include/openbabel-2.0 -I/sw/include/ghemical -I/sw/include/oglappth -Os -MT custom_lights.o -MD -MP -MF ".deps/custom_lights.Tpo" \ -c -o custom_lights.o `test -f 'custom_lights.cpp' || echo './'`custom_lights.cpp; \ then mv -f ".deps/custom_lights.Tpo" ".deps/custom_lights.Po"; \ else rm -f ".deps/custom_lights.Tpo"; exit 1; \ fi if g++ -DHAVE_CONFIG_H -I. -I. -I. -DLOCALE_DIR=\""/sw/share/locale"\" -I/sw/include -I/sw/include/glib-2.0 -I/sw/lib/glib-2.0/include -I/sw/include/gtkglext-1.0 -I/sw/lib/gtkglext-1.0/include -I/sw/include/gtk-2.0 -I/sw/lib/gtk-2.0/include -I/sw/include/pango-1.0 -I/sw/include/libglade-2.0 -I/sw/include/gtk-2.0 -I/sw/lib/gtk-2.0/include -I/sw/include/gtk-2.0 -I/sw/include/pango-1.0 -I/sw/include/atk-1.0 -I/sw/include/cairo -I/sw/include/pango-1.0 -I/sw/include/glib-2.0 -I/sw/lib/glib-2.0/include -I/sw/include/freetype2 -I/sw/include -I/sw/include/libxml2 -I/sw/include -I/usr/X11R6/include -I/usr/X11R6/include -I/opt/X11/include -I/sw/include/openbabel-2.0 -I/sw/include/ghemical -I/sw/include/oglappth -Os -MT project.o -MD -MP -MF ".deps/project.Tpo" \ -c -o project.o `test -f 'project.cpp' || echo './'`project.cpp; \ then mv -f ".deps/project.Tpo" ".deps/project.Po"; \ else rm -f ".deps/project.Tpo"; exit 1; \ fi if g++ -DHAVE_CONFIG_H -I. -I. -I. -DLOCALE_DIR=\""/sw/share/locale"\" -I/sw/include -I/sw/include/glib-2.0 -I/sw/lib/glib-2.0/include -I/sw/include/gtkglext-1.0 -I/sw/lib/gtkglext-1.0/include -I/sw/include/gtk-2.0 -I/sw/lib/gtk-2.0/include -I/sw/include/pango-1.0 -I/sw/include/libglade-2.0 -I/sw/include/gtk-2.0 -I/sw/lib/gtk-2.0/include -I/sw/include/gtk-2.0 -I/sw/include/pango-1.0 -I/sw/include/atk-1.0 -I/sw/include/cairo -I/sw/include/pango-1.0 -I/sw/include/glib-2.0 -I/sw/lib/glib-2.0/include -I/sw/include/freetype2 -I/sw/include -I/sw/include/libxml2 -I/sw/include -I/usr/X11R6/include -I/usr/X11R6/include -I/opt/X11/include -I/sw/include/openbabel-2.0 -I/sw/include/ghemical -I/sw/include/oglappth -Os -MT spline.o -MD -MP -MF ".deps/spline.Tpo" \ -c -o spline.o `test -f 'spline.cpp' || echo './'`spline.cpp; \ then mv -f ".deps/spline.Tpo" ".deps/spline.Po"; \ else rm -f ".deps/spline.Tpo"; exit 1; \ fi if g++ -DHAVE_CONFIG_H -I. -I. -I. -DLOCALE_DIR=\""/sw/share/locale"\" -I/sw/include -I/sw/include/glib-2.0 -I/sw/lib/glib-2.0/include -I/sw/include/gtkglext-1.0 -I/sw/lib/gtkglext-1.0/include -I/sw/include/gtk-2.0 -I/sw/lib/gtk-2.0/include -I/sw/include/pango-1.0 -I/sw/include/libglade-2.0 -I/sw/include/gtk-2.0 -I/sw/lib/gtk-2.0/include -I/sw/include/gtk-2.0 -I/sw/include/pango-1.0 -I/sw/include/atk-1.0 -I/sw/include/cairo -I/sw/include/pango-1.0 -I/sw/include/glib-2.0 -I/sw/lib/glib-2.0/include -I/sw/include/freetype2 -I/sw/include -I/sw/include/libxml2 -I/sw/include -I/usr/X11R6/include -I/usr/X11R6/include -I/opt/X11/include -I/sw/include/openbabel-2.0 -I/sw/include/ghemical -I/sw/include/oglappth -Os -MT pangofont_wcl.o -MD -MP -MF ".deps/pangofont_wcl.Tpo" \ -c -o pangofont_wcl.o `test -f 'pangofont_wcl.cpp' || echo './'`pangofont_wcl.cpp; \ then mv -f ".deps/pangofont_wcl.Tpo" ".deps/pangofont_wcl.Po"; \ else rm -f ".deps/pangofont_wcl.Tpo"; exit 1; \ fi if g++ -DHAVE_CONFIG_H -I. -I. -I. -DLOCALE_DIR=\""/sw/share/locale"\" -I/sw/include -I/sw/include/glib-2.0 -I/sw/lib/glib-2.0/include -I/sw/include/gtkglext-1.0 -I/sw/lib/gtkglext-1.0/include -I/sw/include/gtk-2.0 -I/sw/lib/gtk-2.0/include -I/sw/include/pango-1.0 -I/sw/include/libglade-2.0 -I/sw/include/gtk-2.0 -I/sw/lib/gtk-2.0/include -I/sw/include/gtk-2.0 -I/sw/include/pango-1.0 -I/sw/include/atk-1.0 -I/sw/include/cairo -I/sw/include/pango-1.0 -I/sw/include/glib-2.0 -I/sw/lib/glib-2.0/include -I/sw/include/freetype2 -I/sw/include -I/sw/include/libxml2 -I/sw/include -I/usr/X11R6/include -I/usr/X11R6/include -I/opt/X11/include -I/sw/include/openbabel-2.0 -I/sw/include/ghemical -I/sw/include/oglappth -Os -MT oglview_wcl.o -MD -MP -MF ".deps/oglview_wcl.Tpo" \ -c -o oglview_wcl.o `test -f 'oglview_wcl.cpp' || echo './'`oglview_wcl.cpp; \ then mv -f ".deps/oglview_wcl.Tpo" ".deps/oglview_wcl.Po"; \ else rm -f ".deps/oglview_wcl.Tpo"; exit 1; \ fi In file included from filetrans.cpp:21: In file included from ./filetrans.h:30: In file included from ./project.h:47: In file included from /sw/include/ghemical/geomopt.h:31: /sw/include/ghemical/eng1_qm.h:128:148: warning: control reaches end of non-void function [-Wreturn-type] virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ /sw/include/ghemical/eng1_qm.h:129:135: warning: control reaches end of non-void function [-Wreturn-type] In file included from project.cpp:21: In file included from virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }./project.h : ^ 47: In file included from /sw/include/ghemical/geomopt.h:31: /sw/include/ghemical/eng1_qm.h:128:148: warning: control reaches end of non-void function [-Wreturn-type] virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ /sw/include/ghemical/eng1_qm.h:129:135: warning: control reaches end of non-void function [-Wreturn-type] virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ In file included from fileio.cpp:21: In file included from ./project.h:47: In file included from /sw/include/ghemical/geomopt.h:31: /sw/include/ghemical/eng1_qm.h:128:148: warning: control reaches end of non-void function [-Wreturn-type] virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ /sw/include/ghemical/eng1_qm.h:129:135: warning: control reaches end of non-void function [-Wreturn-type] virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ In file included from custom_camera.cpp:21: In file included from ./custom_camera.h:31: In file included from ./project.h:47: In file included from /sw/include/ghemical/geomopt.h:31: /sw/include/ghemical/eng1_qm.h:128:148: warning: control reaches end of non-void function [-Wreturn-type] virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ /sw/include/ghemical/eng1_qm.h:129:135: warning: control reaches end of non-void function [-Wreturn-type] virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ if g++ -DHAVE_CONFIG_H -I. -I. -I. -DLOCALE_DIR=\""/sw/share/locale"\" -I/sw/include -I/sw/include/glib-2.0 -I/sw/lib/glib-2.0/include -I/sw/include/gtkglext-1.0 -I/sw/lib/gtkglext-1.0/include -I/sw/include/gtk-2.0 -I/sw/lib/gtk-2.0/include -I/sw/include/pango-1.0 -I/sw/include/libglade-2.0 -I/sw/include/gtk-2.0 -I/sw/lib/gtk-2.0/include -I/sw/include/gtk-2.0 -I/sw/include/pango-1.0 -I/sw/include/atk-1.0 -I/sw/include/cairo -I/sw/include/pango-1.0 -I/sw/include/glib-2.0 -I/sw/lib/glib-2.0/include -I/sw/include/freetype2 -I/sw/include -I/sw/include/libxml2 -I/sw/include -I/usr/X11R6/include -I/usr/X11R6/include -I/opt/X11/include -I/sw/include/openbabel-2.0 -I/sw/include/ghemical -I/sw/include/oglappth -Os -MT ac_stor_wcl.o -MD -MP -MF ".deps/ac_stor_wcl.Tpo" \ -c -o ac_stor_wcl.o `test -f 'ac_stor_wcl.cpp' || echo './'`ac_stor_wcl.cpp; \ then mv -f ".deps/ac_stor_wcl.Tpo" ".deps/ac_stor_wcl.Po"; \ else rm -f ".deps/ac_stor_wcl.Tpo"; exit 1; \ fi In file included from custom_app.cpp:21: In file included from ./custom_app.h:33: In file included from ./project.h:47: In file included from /sw/include/ghemical/geomopt.h:31: /sw/include/ghemical/eng1_qm.h:128:148: warning: control reaches end of non-void function [-Wreturn-type] virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ /sw/include/ghemical/eng1_qm.h:129:135: warning: control reaches end of non-void function [-Wreturn-type] virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ if g++ -DHAVE_CONFIG_H -I. -I. -I. -DLOCALE_DIR=\""/sw/share/locale"\" -I/sw/include -I/sw/include/glib-2.0 -I/sw/lib/glib-2.0/include -I/sw/include/gtkglext-1.0 -I/sw/lib/gtkglext-1.0/include -I/sw/include/gtk-2.0 -I/sw/lib/gtk-2.0/include -I/sw/include/pango-1.0 -I/sw/include/libglade-2.0 -I/sw/include/gtk-2.0 -I/sw/lib/gtk-2.0/include -I/sw/include/gtk-2.0 -I/sw/include/pango-1.0 -I/sw/include/atk-1.0 -I/sw/include/cairo -I/sw/include/pango-1.0 -I/sw/include/glib-2.0 -I/sw/lib/glib-2.0/include -I/sw/include/freetype2 -I/sw/include -I/sw/include/libxml2 -I/sw/include -I/usr/X11R6/include -I/usr/X11R6/include -I/opt/X11/include -I/sw/include/openbabel-2.0 -I/sw/include/ghemical -I/sw/include/oglappth -Os -MT p1dview_wcl.o -MD -MP -MF ".deps/p1dview_wcl.Tpo" \ -c -o p1dview_wcl.o `test -f 'p1dview_wcl.cpp' || echo './'`p1dview_wcl.cpp; \ then mv -f ".deps/p1dview_wcl.Tpo" ".deps/p1dview_wcl.Po"; \ else rm -f ".deps/p1dview_wcl.Tpo"; exit 1; \ fi In file included from filetrans.cpp:21: In file included from ./filetrans.h:30: ./project.h:210:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR_OLD(project &, istream &, bool, bool = false); ///< this is for the very old version. ^ ./project.h:211:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR_v100(project &, istream &, bool, bool = false); ///< this is for the version 1.00. ^ ./project.h:212:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR_v110(project &, istream &, bool, bool = false); ///< this is for the version 1.10. ^ ./project.h:214:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR(project &, istream &, bool, bool = false); ^ In file included from project.cpp:21: ./project.h:210:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR_OLD(project &, istream &, bool, bool = false); ///< this is for the very old version. ^ ./project.h:211:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR_v100(project &, istream &, bool, bool = false); ///< this is for the version 1.00. ^ ./project.h:212:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR_v110(project &, istream &, bool, bool = false); ///< this is for the version 1.10. ^ ./project.h:214:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR(project &, istream &, bool, bool = false); ^ In file included from custom_camera.cpp:21: In file included from ./custom_camera.h:31: ./project.h:210:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR_OLD(project &, istream &, bool, bool = false); ///< this is for the very old version. ^ ./project.h:211:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR_v100(project &, istream &, bool, bool = false); ///< this is for the version 1.00. ^ ./project.h:212:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR_v110(project &, istream &, bool, bool = false); ///< this is for the version 1.10. ^ ./project.h:214:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR(project &, istream &, bool, bool = false); ^ In file included from fileio.cpp:21: ./project.h:210:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR_OLD(project &, istream &, bool, bool = false); ///< this is for the very old version. ^ ./project.h:211:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR_v100(project &, istream &, bool, bool = false); ///< this is for the version 1.00. ^ ./project.h:212:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR_v110(project &, istream &, bool, bool = false); ///< this is for the version 1.10. ^ ./project.h:214:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR(project &, istream &, bool, bool = false); ^ 2 warnings and 4 errors generated. In file included from custom_app.cpp:21: In file included from ./custom_app.h:33: ./project.h:210:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR_OLD(project &, istream &, bool, bool = false); ///< this is for the very old version. ^ ./project.h:211:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR_v100(project &, istream &, bool, bool = false); ///< this is for the version 1.00. ^ ./project.h:212:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR_v110(project &, istream &, bool, bool = false); ///< this is for the version 1.10. ^ ./project.h:214:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR(project &, istream &, bool, bool = false); ^ fileio.cpp:44:6: error: friend declaration specifying a default argument must be the only declaration bool ReadGPR_OLD(project & prj, istream & file, bool, bool) ^ ./project.h:210:14: note: previous declaration is here friend bool ReadGPR_OLD(project &, istream &, bool, bool = false); ///< this is for the very old version. ^ fileio.cpp:85:6: error: friend declaration specifying a default argument must be the only declaration bool ReadGPR_v100(project & prj, istream & file, bool selected, bool skipheader) ^ ./project.h:211:14: note: previous declaration is here friend bool ReadGPR_v100(project &, istream &, bool, bool = false); ///< this is for the version 1.00. ^ fileio.cpp:279:6: error: friend declaration specifying a default argument must be the only declaration bool ReadGPR_v110(project & prj, istream & file, bool selected, bool skipheader) ^ ./project.h:212:14: note: previous declaration is here friend bool ReadGPR_v110(project &, istream &, bool, bool = false); ///< this is for the version 1.10. ^ fileio.cpp:521:6: error: friend declaration specifying a default argument must be the only declaration bool ReadGPR(project & prj, istream & file, bool selected, bool skipheader) ^ ./project.h:214:14: note: previous declaration is here friend bool ReadGPR(project &, istream &, bool, bool = false); ^ In file included from oglview_wcl.cpp:21: In file included from ./oglview_wcl.h:31: In file included from ./custom_camera.h:31: In file included from ./project.h:47: In file included from /sw/include/ghemical/geomopt.h:31: /sw/include/ghemical/eng1_qm.h:128:148: warning: control reaches end of non-void function [-Wreturn-type] virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ /sw/include/ghemical/eng1_qm.h:129:135: warning: control reaches end of non-void function [-Wreturn-type] virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ In file included from ac_stor_wcl.cpp:23: In file included from ./project.h:47: In file included from /sw/include/ghemical/geomopt.h:31: /sw/include/ghemical/eng1_qm.h:128:148: warning: control reaches end of non-void function [-Wreturn-type] virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ /sw/include/ghemical/eng1_qm.h:129:135: warning: control reaches end of non-void function [-Wreturn-type] virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ In file included from oglview_wcl.cpp:21: In file included from ./oglview_wcl.h:31: In file included from ./custom_camera.h:31: ./project.h:210:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR_OLD(project &, istream &, bool, bool = false); ///< this is for the very old version. ^ ./project.h:211:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR_v100(project &, istream &, bool, bool = false); ///< this is for the version 1.00. ^ ./project.h:212:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR_v110(project &, istream &, bool, bool = false); ///< this is for the version 1.10. ^ ./project.h:214:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR(project &, istream &, bool, bool = false); ^ In file included from ac_stor_wcl.cpp:23: ./project.h:210:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR_OLD(project &, istream &, bool, bool = false); ///< this is for the very old version. ^ ./project.h:211:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR_v100(project &, istream &, bool, bool = false); ///< this is for the version 1.00. ^ ./project.h:212:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR_v110(project &, istream &, bool, bool = false); ///< this is for the version 1.10. ^ ./project.h:214:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR(project &, istream &, bool, bool = false); ^ make[3]: *** [custom_camera.o] Error 1 make[3]: *** Waiting for unfinished jobs.... 2 warnings and 4 errors generated. 2 warnings and 4 errors generated. 2 warnings and 4 errors generated. 2 warnings and 8 errors generated. 2 warnings and 4 errors generated. 2 warnings and 4 errors generated. make[3]: *** [custom_app.o] Error 1 make[3]: *** [ac_stor_wcl.o] Error 1 make[3]: *** [oglview_wcl.o] Error 1 make[3]: *** [fileio.o] Error 1 make[3]: *** [filetrans.o] Error 1 make[3]: *** [project.o] Error 1 In file included from p1dview_wcl.cpp:24: In file included from ./custom_app.h:33: In file included from ./project.h:47: In file included from /sw/include/ghemical/geomopt.h:31: /sw/include/ghemical/eng1_qm.h:128:148: warning: control reaches end of non-void function [-Wreturn-type] virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ /sw/include/ghemical/eng1_qm.h:129:135: warning: control reaches end of non-void function [-Wreturn-type] virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ In file included from p1dview_wcl.cpp:24: In file included from ./custom_app.h:33: ./project.h:210:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR_OLD(project &, istream &, bool, bool = false); ///< this is for the very old version. ^ ./project.h:211:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR_v100(project &, istream &, bool, bool = false); ///< this is for the version 1.00. ^ ./project.h:212:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR_v110(project &, istream &, bool, bool = false); ///< this is for the version 1.10. ^ ./project.h:214:14: error: friend declaration specifying a default argument must be a definition friend bool ReadGPR(project &, istream &, bool, bool = false); ^ 2 warnings and 4 errors generated. make[3]: *** [p1dview_wcl.o] Error 1 make[2]: *** [all-recursive] Error 1 make[1]: *** [all] Error 2 make: *** [all-recursive] Error 1 ### execution of make failed, exit code 2 ### execution of /tmp/fink.lVswC failed, exit code 2 Removing runtime build-lock... Removing build-lock package... /sw/bin/dpkg-lockwait -r fink-buildlock-ghemical-2.99.2-1005 (Reading database ... 11703 files and directories currently installed.) Removing fink-buildlock-ghemical-2.99.2-1005 ... Failed: phase compiling: ghemical-2.99.2-1005 failed Before reporting any errors, please run "fink selfupdate" and try again. Also try using "fink configure" to set your maximum build jobs to 1 and attempt to build the package again. If you continue to have issues, please check to see if the FAQ on Fink's website solves the problem. If not, ask on one (not both, please) of these mailing lists: The Fink Users List The Fink Beginners List , with a carbon copy to the maintainer: Jack Fink Note that this is preferable to emailing just the maintainer directly, since most fink package maintainers do not have access to all possible hardware and software configurations. Please try to include the complete error message in your report. This generally consists of a compiler line starting with e.g. "gcc" or "g++" followed by the actual error output from the compiler. Also include the following system information: Package manager version: 0.37.0 Distribution version: selfupdate-cvs Thu Jul 24 20:26:24 2014, 10.9, x86_64 Trees: local/main stable/main Xcode.app: 5.1.1 Xcode command-line tools: 6.0.0.0.1.1405597879 Max. Fink build jobs: 8