printf ' ' | fink --no-use-binary-dist --yes --build-as-nobody rebuild libccp4 2>&1 The package 'libccp4' will be built without being installed. Reading build dependency for libccp4-6.4.0-rc1-2... Reading dependency for libccp4-6.4.0-rc1-2... Reading dependency for libccp4-shlibs-6.4.0-rc1-2... Reading dependency for libccp4-dev-6.4.0-rc1-2... Reading dependency for libccp4-lib-6.4.0-rc1-2... Reading build conflict for libccp4-6.4.0-rc1-2... WARNING: While resolving conflict "g77" for package "libccp4-6.4.0-rc1-2", package "g77" was not found. WARNING: While resolving conflict "g95" for package "libccp4-6.4.0-rc1-2", package "g95" was not found. The package 'mmdb-dev' will be installed. Reading dependency for mmdb-dev-1.25.3-102... Reading runtime dependency for mmdb-dev-1.25.3-102... The package 'ssm-dev' will be installed. Reading dependency for ssm-dev-1.3-102... Reading runtime dependency for ssm-dev-1.3-102... The package 'gcc49' will be installed. Reading dependency for gcc49-4.9.1-1000... Reading runtime dependency for gcc49-4.9.1-1000... The package 'pkgconfig' will be installed. Reading dependency for pkgconfig-0.28-1... Reading runtime dependency for pkgconfig-0.28-1... The package 'gcc49-shlibs' will be installed. Reading dependency for gcc49-shlibs-4.9.1-1000... Reading runtime dependency for gcc49-shlibs-4.9.1-1000... The package 'mmdb-shlibs' will be installed. Reading dependency for mmdb-shlibs-1.25.3-102... Reading runtime dependency for mmdb-shlibs-1.25.3-102... The package 'ssm-shlibs' will be installed. Reading dependency for ssm-shlibs-1.3-102... Reading runtime dependency for ssm-shlibs-1.3-102... The package 'gcc49-compiler' will be installed. Reading dependency for gcc49-compiler-4.9.1-1000... Reading runtime dependency for gcc49-compiler-4.9.1-1000... The package 'glib2-shlibs' will be installed. Reading dependency for glib2-shlibs-2.22.4-8... Reading runtime dependency for glib2-shlibs-2.22.4-8... The package 'gmp5-shlibs' will be installed. Reading dependency for gmp5-shlibs-6.0.0a-1... Reading runtime dependency for gmp5-shlibs-6.0.0a-1... The package 'libgmpxx5-shlibs' will be installed. Reading dependency for libgmpxx5-shlibs-6.0.0a-1... Reading runtime dependency for libgmpxx5-shlibs-6.0.0a-1... The package 'libmpfr4-shlibs' will be installed. Reading dependency for libmpfr4-shlibs-3.1.2-1... Reading runtime dependency for libmpfr4-shlibs-3.1.2-1... The package 'cloog-org2-shlibs' will be installed. Reading dependency for cloog-org2-shlibs-0.18.2-1... Reading runtime dependency for cloog-org2-shlibs-0.18.2-1... The package 'isl-shlibs' will be installed. Reading dependency for isl-shlibs-0.12.2-2... Reading runtime dependency for isl-shlibs-0.12.2-2... The package 'libmpc3-shlibs' will be installed. Reading dependency for libmpc3-shlibs-1.0.2-1... Reading runtime dependency for libmpc3-shlibs-1.0.2-1... The package 'xdg-base' will be installed. Reading dependency for xdg-base-0.8-2... Reading runtime dependency for xdg-base-0.8-2... The following package will be rebuilt: libccp4 The following 16 additional packages will be installed: cloog-org2-shlibs gcc49 gcc49-compiler gcc49-shlibs glib2-shlibs gmp5-shlibs isl-shlibs libgmpxx5-shlibs libmpc3-shlibs libmpfr4-shlibs mmdb-dev mmdb-shlibs pkgconfig ssm-dev ssm-shlibs xdg-base Do you want to continue? [Y/n] (assuming default) curl --connect-timeout 30 -f -L -A 'fink/0.37.0' -O http://distfiles.master.finkmirrors.net/distfiles/libccp4-6.4.0-rc1.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 910k 0 1206 0 0 802 0 0:19:22 0:00:01 0:19:21 802 55 910k 55 507k 0 0 240k 0 0:00:03 0:00:02 0:00:01 240k 100 910k 100 910k 0 0 342k 0 0:00:02 0:00:02 --:--:-- 342k curl --connect-timeout 30 -f -L -A 'fink/0.37.0' -O http://distfiles.master.finkmirrors.net/distfiles/prodrg.param % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 1 84097 1 1241 0 0 1970 0 0:00:42 --:--:-- 0:00:42 1969 100 84097 100 84097 0 0 97318 0 --:--:-- --:--:-- --:--:-- 97221 curl --connect-timeout 30 -f -L -A 'fink/0.37.0' -O http://distfiles.master.finkmirrors.net/distfiles/ccp4srs-data-20120621.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 38.3M 0 44642 0 0 68362 0 0:09:48 --:--:-- 0:09:48 68364 0 38.3M 0 288k 0 0 121k 0 0:05:22 0:00:02 0:05:20 121k 0 38.3M 0 289k 0 0 100k 0 0:06:30 0:00:02 0:06:28 100k 0 38.3M 0 313k 0 0 91071 0 0:07:21 0:00:03 0:07:18 91071 1 38.3M 1 572k 0 0 127k 0 0:05:08 0:00:04 0:05:04 127k 3 38.3M 3 1248k 0 0 229k 0 0:02:51 0:00:05 0:02:46 252k 4 38.3M 4 1958k 0 0 292k 0 0:02:14 0:00:06 0:02:08 385k 5 38.3M 5 2248k 0 0 302k 0 0:02:09 0:00:07 0:02:02 430k 6 38.3M 6 2714k 0 0 322k 0 0:02:02 0:00:08 0:01:54 489k 8 38.3M 8 3380k 0 0 357k 0 0:01:49 0:00:09 0:01:40 565k 9 38.3M 9 3895k 0 0 360k 0 0:01:48 0:00:10 0:01:38 493k 10 38.3M 10 4244k 0 0 371k 0 0:01:45 0:00:11 0:01:34 483k 11 38.3M 11 4647k 0 0 373k 0 0:01:45 0:00:12 0:01:33 479k 13 38.3M 13 5223k 0 0 388k 0 0:01:41 0:00:13 0:01:28 501k 13 38.3M 13 5459k 0 0 371k 0 0:01:45 0:00:14 0:01:31 397k 14 38.3M 14 5763k 0 0 373k 0 0:01:45 0:00:15 0:01:30 402k 15 38.3M 15 6261k 0 0 380k 0 0:01:43 0:00:16 0:01:27 402k 17 38.3M 17 6910k 0 0 396k 0 0:01:39 0:00:17 0:01:22 451k 18 38.3M 18 7300k 0 0 388k 0 0:01:41 0:00:18 0:01:23 388k 18 38.3M 18 7383k 0 0 377k 0 0:01:44 0:00:19 0:01:25 396k 20 38.3M 20 7965k 0 0 389k 0 0:01:40 0:00:20 0:01:20 439k 22 38.3M 22 8673k 0 0 404k 0 0:01:37 0:00:21 0:01:16 483k 23 38.3M 23 9102k 0 0 399k 0 0:01:38 0:00:22 0:01:16 410k 23 38.3M 23 9384k 0 0 399k 0 0:01:38 0:00:23 0:01:15 441k 24 38.3M 24 9811k 0 0 399k 0 0:01:38 0:00:24 0:01:14 485k 26 38.3M 26 10.1M 0 0 408k 0 0:01:36 0:00:25 0:01:11 483k 27 38.3M 27 10.7M 0 0 410k 0 0:01:35 0:00:26 0:01:09 433k 28 38.3M 28 10.7M 0 0 397k 0 0:01:38 0:00:27 0:01:11 388k 28 38.3M 28 10.8M 0 0 388k 0 0:01:41 0:00:28 0:01:13 338k 28 38.3M 28 10.8M 0 0 376k 0 0:01:44 0:00:29 0:01:15 258k 28 38.3M 28 11.0M 0 0 366k 0 0:01:47 0:00:30 0:01:17 166k 28 38.3M 28 11.0M 0 0 359k 0 0:01:49 0:00:31 0:01:18 68790 28 38.3M 28 11.0M 0 0 350k 0 0:01:52 0:00:32 0:01:20 68522 29 38.3M 29 11.2M 0 0 342k 0 0:01:54 0:00:33 0:01:21 85329 29 38.3M 29 11.4M 0 0 339k 0 0:01:55 0:00:34 0:01:21 121k 30 38.3M 30 11.6M 0 0 332k 0 0:01:58 0:00:35 0:01:23 122k 31 38.3M 31 12.0M 0 0 339k 0 0:01:55 0:00:36 0:01:19 213k 34 38.3M 34 13.1M 0 0 361k 0 0:01:48 0:00:37 0:01:11 431k 36 38.3M 36 14.0M 0 0 370k 0 0:01:46 0:00:38 0:01:08 546k 36 38.3M 36 14.1M 0 0 368k 0 0:01:46 0:00:39 0:01:07 570k 39 38.3M 39 15.0M 0 0 380k 0 0:01:43 0:00:40 0:01:03 735k 41 38.3M 41 15.8M 0 0 391k 0 0:01:40 0:00:41 0:00:59 773k 42 38.3M 42 16.1M 0 0 390k 0 0:01:40 0:00:42 0:00:58 612k 43 38.3M 43 16.6M 0 0 389k 0 0:01:40 0:00:43 0:00:57 541k 44 38.3M 44 17.0M 0 0 392k 0 0:01:40 0:00:44 0:00:56 579k 45 38.3M 45 17.5M 0 0 396k 0 0:01:39 0:00:45 0:00:54 528k 47 38.3M 47 18.1M 0 0 399k 0 0:01:38 0:00:46 0:00:52 466k 48 38.3M 48 18.5M 0 0 396k 0 0:01:39 0:00:47 0:00:52 445k 49 38.3M 49 18.8M 0 0 398k 0 0:01:38 0:00:48 0:00:50 482k 50 38.3M 50 19.3M 0 0 401k 0 0:01:37 0:00:49 0:00:48 480k 51 38.3M 51 19.6M 0 0 395k 0 0:01:39 0:00:50 0:00:49 387k 51 38.3M 51 19.8M 0 0 395k 0 0:01:39 0:00:51 0:00:48 359k 53 38.3M 53 20.3M 0 0 398k 0 0:01:38 0:00:52 0:00:46 412k 54 38.3M 54 20.9M 0 0 401k 0 0:01:37 0:00:53 0:00:44 421k 55 38.3M 55 21.4M 0 0 402k 0 0:01:37 0:00:54 0:00:43 410k 57 38.3M 57 21.8M 0 0 402k 0 0:01:37 0:00:55 0:00:42 480k 58 38.3M 58 22.3M 0 0 404k 0 0:01:37 0:00:56 0:00:41 497k 59 38.3M 59 22.8M 0 0 406k 0 0:01:36 0:00:57 0:00:39 496k 60 38.3M 60 23.3M 0 0 409k 0 0:01:35 0:00:58 0:00:37 501k 61 38.3M 61 23.7M 0 0 407k 0 0:01:36 0:00:59 0:00:37 462k 62 38.3M 62 24.1M 0 0 409k 0 0:01:36 0:01:00 0:00:36 486k 64 38.3M 64 24.6M 0 0 411k 0 0:01:35 0:01:01 0:00:34 481k 64 38.3M 64 24.8M 0 0 405k 0 0:01:36 0:01:02 0:00:34 394k 65 38.3M 65 25.2M 0 0 406k 0 0:01:36 0:01:03 0:00:33 376k 66 38.3M 66 25.7M 0 0 408k 0 0:01:36 0:01:04 0:00:32 418k 68 38.3M 68 26.2M 0 0 410k 0 0:01:35 0:01:05 0:00:30 426k 69 38.3M 69 26.7M 0 0 411k 0 0:01:35 0:01:06 0:00:29 411k 70 38.3M 70 27.1M 0 0 410k 0 0:01:35 0:01:07 0:00:28 476k 71 38.3M 71 27.5M 0 0 412k 0 0:01:35 0:01:08 0:00:27 478k 73 38.3M 73 28.1M 0 0 414k 0 0:01:34 0:01:09 0:00:25 499k 73 38.3M 73 28.3M 0 0 409k 0 0:01:35 0:01:10 0:00:25 402k 74 38.3M 74 28.7M 0 0 411k 0 0:01:35 0:01:11 0:00:24 416k 75 38.3M 75 29.1M 0 0 411k 0 0:01:35 0:01:12 0:00:23 427k 76 38.3M 76 29.4M 0 0 408k 0 0:01:36 0:01:13 0:00:23 363k 78 38.3M 78 30.1M 0 0 414k 0 0:01:34 0:01:14 0:00:20 407k 79 38.3M 79 30.6M 0 0 414k 0 0:01:34 0:01:15 0:00:19 474k 80 38.3M 80 31.0M 0 0 415k 0 0:01:34 0:01:16 0:00:18 470k 82 38.3M 82 31.5M 0 0 416k 0 0:01:34 0:01:17 0:00:17 489k 83 38.3M 83 32.0M 0 0 416k 0 0:01:34 0:01:18 0:00:16 531k 84 38.3M 84 32.4M 0 0 417k 0 0:01:34 0:01:19 0:00:15 460k 85 38.3M 85 32.8M 0 0 418k 0 0:01:33 0:01:20 0:00:13 492k 87 38.3M 87 33.4M 0 0 420k 0 0:01:33 0:01:21 0:00:12 493k 88 38.3M 88 33.9M 0 0 420k 0 0:01:33 0:01:22 0:00:11 475k 89 38.3M 89 34.3M 0 0 420k 0 0:01:33 0:01:23 0:00:10 487k 90 38.3M 90 34.7M 0 0 421k 0 0:01:33 0:01:24 0:00:09 492k 92 38.3M 92 35.3M 0 0 423k 0 0:01:32 0:01:25 0:00:07 497k 93 38.3M 93 35.8M 0 0 423k 0 0:01:32 0:01:26 0:00:06 475k 94 38.3M 94 36.0M 0 0 422k 0 0:01:33 0:01:27 0:00:06 453k 95 38.3M 95 36.6M 0 0 424k 0 0:01:32 0:01:28 0:00:04 501k 97 38.3M 97 37.2M 0 0 426k 0 0:01:32 0:01:29 0:00:03 500k 98 38.3M 98 37.9M 0 0 429k 0 0:01:31 0:01:30 0:00:01 543k 100 38.3M 100 38.3M 0 0 431k 0 0:01:31 0:01:31 --:--:-- 591k Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libgmpxx5-shlibs_6.0.0a-1_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/gmp5-shlibs_6.0.0a-1_darwin-x86_64.deb Selecting previously deselected package libgmpxx5-shlibs. (Reading database ... 4296 files and directories currently installed.) Unpacking libgmpxx5-shlibs (from .../libgmpxx5-shlibs_6.0.0a-1_darwin-x86_64.deb) ... Selecting previously deselected package gmp5-shlibs. Unpacking gmp5-shlibs (from .../gmp5-shlibs_6.0.0a-1_darwin-x86_64.deb) ... Setting up gmp5-shlibs (6.0.0a-1) ... Setting up libgmpxx5-shlibs (6.0.0a-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libmpfr4-shlibs_3.1.2-1_darwin-x86_64.deb Selecting previously deselected package libmpfr4-shlibs. (Reading database ... 4325 files and directories currently installed.) Unpacking libmpfr4-shlibs (from .../libmpfr4-shlibs_3.1.2-1_darwin-x86_64.deb) ... Setting up libmpfr4-shlibs (3.1.2-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/mmdb-dev_1.25.3-102_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/mmdb-shlibs_1.25.3-102_darwin-x86_64.deb Selecting previously deselected package mmdb-dev. (Reading database ... 4338 files and directories currently installed.) Unpacking mmdb-dev (from .../mmdb-dev_1.25.3-102_darwin-x86_64.deb) ... Selecting previously deselected package mmdb-shlibs. Unpacking mmdb-shlibs (from .../mmdb-shlibs_1.25.3-102_darwin-x86_64.deb) ... Setting up mmdb-shlibs (1.25.3-102) ... Setting up mmdb-dev (1.25.3-102) ... Clearing dependency_libs of .la files being installed Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/ssm-dev_1.3-102_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/ssm-shlibs_1.3-102_darwin-x86_64.deb Selecting previously deselected package ssm-dev. (Reading database ... 4379 files and directories currently installed.) Unpacking ssm-dev (from .../ssm-dev_1.3-102_darwin-x86_64.deb) ... Selecting previously deselected package ssm-shlibs. Unpacking ssm-shlibs (from .../ssm-shlibs_1.3-102_darwin-x86_64.deb) ... Setting up ssm-dev (1.3-102) ... Clearing dependency_libs of .la files being installed Setting up ssm-shlibs (1.3-102) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/xdg-base_0.8-2_darwin-x86_64.deb Selecting previously deselected package xdg-base. (Reading database ... 4391 files and directories currently installed.) Unpacking xdg-base (from .../xdg-base_0.8-2_darwin-x86_64.deb) ... Setting up xdg-base (0.8-2) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/glib2-shlibs_2.22.4-8_darwin-x86_64.deb Selecting previously deselected package glib2-shlibs. (Reading database ... 4393 files and directories currently installed.) Unpacking glib2-shlibs (from .../glib2-shlibs_2.22.4-8_darwin-x86_64.deb) ... Setting up glib2-shlibs (2.22.4-8) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/devel/isl-shlibs_0.12.2-2_darwin-x86_64.deb Selecting previously deselected package isl-shlibs. (Reading database ... 4620 files and directories currently installed.) Unpacking isl-shlibs (from .../isl-shlibs_0.12.2-2_darwin-x86_64.deb) ... Setting up isl-shlibs (0.12.2-2) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libmpc3-shlibs_1.0.2-1_darwin-x86_64.deb Selecting previously deselected package libmpc3-shlibs. (Reading database ... 4621 files and directories currently installed.) Unpacking libmpc3-shlibs (from .../libmpc3-shlibs_1.0.2-1_darwin-x86_64.deb) ... Setting up libmpc3-shlibs (1.0.2-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/pkgconfig_0.28-1_darwin-x86_64.deb Selecting previously deselected package pkgconfig. (Reading database ... 4624 files and directories currently installed.) Unpacking pkgconfig (from .../pkgconfig_0.28-1_darwin-x86_64.deb) ... Setting up pkgconfig (0.28-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/devel/cloog-org2-shlibs_0.18.2-1_darwin-x86_64.deb Selecting previously deselected package cloog-org2-shlibs. (Reading database ... 4638 files and directories currently installed.) Unpacking cloog-org2-shlibs (from .../cloog-org2-shlibs_0.18.2-1_darwin-x86_64.deb) ... Setting up cloog-org2-shlibs (0.18.2-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/gcc49_4.9.1-1000_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/gcc49-shlibs_4.9.1-1000_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/gcc49-compiler_4.9.1-1000_darwin-x86_64.deb Selecting previously deselected package gcc49. (Reading database ... 4639 files and directories currently installed.) Unpacking gcc49 (from .../gcc49_4.9.1-1000_darwin-x86_64.deb) ... Selecting previously deselected package gcc49-shlibs. Unpacking gcc49-shlibs (from .../gcc49-shlibs_4.9.1-1000_darwin-x86_64.deb) ... Selecting previously deselected package gcc49-compiler. Unpacking gcc49-compiler (from .../gcc49-compiler_4.9.1-1000_darwin-x86_64.deb) ... Setting up gcc49-shlibs (4.9.1-1000) ... Clearing dependency_libs of .la files being installed Setting up gcc49-compiler (4.9.1-1000) ... Clearing dependency_libs of .la files being installed Setting up gcc49 (4.9.1-1000) ... * Classpath Tools: (cp-tools). GNU Classpath Tools Guide install-info(/sw/share/info/cp-tools.info): creating new section `GNU Libraries' * gcc: (gcc). The GNU Compiler Collection. install-info(/sw/share/info/gcc.info): replacing existing dir entry for `gcc' * gfortran: (gfortran). The GNU Fortran Compiler. * Cpp: (cpp). The GNU C preprocessor. * gccinstall: (gccinstall). Installing the GNU Compiler Collection. * libgomp: (libgomp). GNU OpenMP runtime library * Cpplib: (cppinternals). Cpplib internals. * gccint: (gccint). Internals of the GNU Compiler Collection. * Gcj: (gcj). Ahead-of-time compiler for the Java language Setting runtime build-lock... dpkg-deb -b /sw/build.build/root-fink-buildlock-libccp4-6.4.0-rc1-2 /sw/build.build dpkg-deb: building package `fink-buildlock-libccp4-6.4.0-rc1-2' in `/sw/build.build/fink-buildlock-libccp4-6.4.0-rc1-2_2014.07.29-21.40.42_darwin-x86_64.deb'. Installing build-lock package... /sw/bin/dpkg-lockwait -i /sw/build.build/fink-buildlock-libccp4-6.4.0-rc1-2_2014.07.29-21.40.42_darwin-x86_64.deb Selecting previously deselected package fink-buildlock-libccp4-6.4.0-rc1-2. (Reading database ... 10244 files and directories currently installed.) Unpacking fink-buildlock-libccp4-6.4.0-rc1-2 (from .../fink-buildlock-libccp4-6.4.0-rc1-2_2014.07.29-21.40.42_darwin-x86_64.deb) ... Setting up fink-buildlock-libccp4-6.4.0-rc1-2 (2014.07.29-21.40.42) ... sudo -u fink-bld [ENV] sh -c /tmp/fink.3lcbQ env LANG=C LC_ALL=C /sw/bin/tar --no-same-owner --no-same-permissions -xvf /sw/src/libccp4-6.4.0-rc1.tar.gz libccp4-6.4.0/ libccp4-6.4.0/INSTALL libccp4-6.4.0/COPYING.LESSER libccp4-6.4.0/COPYING libccp4-6.4.0/configure libccp4-6.4.0/libccp4f.pc.in libccp4-6.4.0/libccp4c.pc.in libccp4-6.4.0/config.h.in libccp4-6.4.0/Makefile.in libccp4-6.4.0/Makefile.am libccp4-6.4.0/ccp4-config.cmake libccp4-6.4.0/aclocal.m4 libccp4-6.4.0/configure.ac libccp4-6.4.0/m4/ libccp4-6.4.0/m4/lt~obsolete.m4 libccp4-6.4.0/m4/ltversion.m4 libccp4-6.4.0/m4/ltsugar.m4 libccp4-6.4.0/m4/ltoptions.m4 libccp4-6.4.0/m4/libtool.m4 libccp4-6.4.0/fortran/ libccp4-6.4.0/fortran/w32mvs.f libccp4-6.4.0/fortran/mthlib.for libccp4-6.4.0/fortran/testlib.f libccp4-6.4.0/fortran/vms.for libccp4-6.4.0/fortran/vmsdiskio.for libccp4-6.4.0/fortran/unix.m4 libccp4-6.4.0/fortran/dna_header.fh libccp4-6.4.0/fortran/sorting_main.f libccp4-6.4.0/fortran/plotsubs.f libccp4-6.4.0/fortran/plot84lib.f libccp4-6.4.0/fortran/lgglib.f libccp4-6.4.0/fortran/pxxml.f libccp4-6.4.0/fortran/pack_f.f libccp4-6.4.0/fortran/dna_output.f libccp4-6.4.0/fortran/keyparse.f libccp4-6.4.0/fortran/libhtml.f libccp4-6.4.0/fortran/rwbrook.f libccp4-6.4.0/fortran/parser.f libccp4-6.4.0/fortran/modlib.f libccp4-6.4.0/fortran/fftlib.f libccp4-6.4.0/fortran/ccplib.f libccp4-6.4.0/fortran/library_f.c libccp4-6.4.0/fortran/cmtzlib_f.c libccp4-6.4.0/fortran/ccp4_unitcell_f.c libccp4-6.4.0/fortran/ccp4_general_f.c libccp4-6.4.0/fortran/csymlib_f.c libccp4-6.4.0/fortran/cmaplib_f.c libccp4-6.4.0/fortran/ccp4_parser_f.c libccp4-6.4.0/fortran/ccp4_diskio_f.c libccp4-6.4.0/data/ libccp4-6.4.0/data/font84.ascii libccp4-6.4.0/data/symop.lib libccp4-6.4.0/data/syminfo.lib libccp4-6.4.0/data/atomsf.lib libccp4-6.4.0/data/atomsf_neutron.lib libccp4-6.4.0/ccp4/ libccp4-6.4.0/ccp4/vmslibrary.c libccp4-6.4.0/ccp4/w32mvs.c libccp4-6.4.0/ccp4/pack_c.c libccp4-6.4.0/ccp4/cmap_symop.c libccp4-6.4.0/ccp4/cmap_close.c libccp4-6.4.0/ccp4/library_utils.c libccp4-6.4.0/ccp4/cmap_stats.c libccp4-6.4.0/ccp4/cmap_accessor.c libccp4-6.4.0/ccp4/library_file.c libccp4-6.4.0/ccp4/cmap_skew.c libccp4-6.4.0/ccp4/ccp4_unitcell.c libccp4-6.4.0/ccp4/library_err.c libccp4-6.4.0/ccp4/cmap_open.c libccp4-6.4.0/ccp4/ccp4_program.c libccp4-6.4.0/ccp4/cvecmat.c libccp4-6.4.0/ccp4/cmap_labels.c libccp4-6.4.0/ccp4/ccp4_parser.c libccp4-6.4.0/ccp4/csymlib.c libccp4-6.4.0/ccp4/cmap_header.c libccp4-6.4.0/ccp4/ccp4_general.c libccp4-6.4.0/ccp4/cmtzlib.c libccp4-6.4.0/ccp4/cmap_data.c libccp4-6.4.0/ccp4/ccp4_array.c libccp4-6.4.0/ccp4/pack_c.h libccp4-6.4.0/ccp4/cmtzlib.h libccp4-6.4.0/ccp4/cmap_skew.h libccp4-6.4.0/ccp4/cmap_data.h libccp4-6.4.0/ccp4/ccp4_types.h libccp4-6.4.0/ccp4/ccp4_parser.h libccp4-6.4.0/ccp4/ccp4_errno.h libccp4-6.4.0/ccp4/overview.h libccp4-6.4.0/ccp4/cmaplib_f.h libccp4-6.4.0/ccp4/cmap_labels.h libccp4-6.4.0/ccp4/ccp4_vars.h libccp4-6.4.0/ccp4/ccp4_sysdep.h libccp4-6.4.0/ccp4/ccp4_general.h libccp4-6.4.0/ccp4/ccp4_array.h libccp4-6.4.0/ccp4/mtzdata.h libccp4-6.4.0/ccp4/cvecmat.h libccp4-6.4.0/ccp4/cmaplib.h libccp4-6.4.0/ccp4/cmap_header.h libccp4-6.4.0/ccp4/ccp4_utils.h libccp4-6.4.0/ccp4/ccp4_spg.h libccp4-6.4.0/ccp4/ccp4_fortran.h libccp4-6.4.0/ccp4/w32mvs.h libccp4-6.4.0/ccp4/library_file.h libccp4-6.4.0/ccp4/csymlib.h libccp4-6.4.0/ccp4/cmap_stats.h libccp4-6.4.0/ccp4/cmap_errno.h libccp4-6.4.0/ccp4/ccp4_unitcell.h libccp4-6.4.0/ccp4/ccp4_program.h libccp4-6.4.0/ccp4/ccp4_file_err.h libccp4-6.4.0/build-aux/ libccp4-6.4.0/build-aux/missing libccp4-6.4.0/build-aux/ltmain.sh libccp4-6.4.0/build-aux/install-sh libccp4-6.4.0/build-aux/depcomp libccp4-6.4.0/build-aux/config.sub libccp4-6.4.0/build-aux/config.guess libccp4-6.4.0/build-aux/ar-lib sudo -u fink-bld [ENV] sh -c /tmp/fink.yUCpn cp /sw/src/prodrg.param . sudo -u fink-bld [ENV] sh -c /tmp/fink.G8BU5 env LANG=C LC_ALL=C /sw/bin/tar --no-same-owner --no-same-permissions -xvf /sw/src/ccp4srs-data-20120621.tar.gz ccp4srs-data-20120621/ ccp4srs-data-20120621/index.srs ccp4srs-data-20120621/graph.srs ccp4srs-data-20120621/struct.srs sudo -u fink-bld [ENV] sh -c /tmp/fink.1rXLf /tmp/fink.ootHX #!/bin/bash -evf LDFLAGS="-L/sw/lib/gcc4.9/lib -L/sw/lib -L/usr/lib" \ MMDB_CFLAGS="-I/sw/include/mmdb" MMDB_LIBS="-L/sw/lib" \ FC="/sw/bin/gfortran-fsf-4.9" \ ./configure --enable-shared F77="/sw/bin/gfortran-fsf-4.9" FFLAGS="-L/sw/lib/gcc4.9/lib -lgfortran " --prefix=/sw checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... build-aux/install-sh -c -d checking for gawk... no checking for mawk... no checking for nawk... no checking for awk... awk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking dependency style of gcc... gcc3 checking for ar... ar checking the archiver (ar) interface... ar checking build system type... x86_64-apple-darwin13.3.0 checking host system type... x86_64-apple-darwin13.3.0 checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm checking the name lister (/usr/bin/nm) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 196608 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-apple-darwin13.3.0 file names to x86_64-apple-darwin13.3.0 format... func_convert_file_noop checking how to convert x86_64-apple-darwin13.3.0 file names to toolchain format... func_convert_file_noop checking for /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld option to reload object files... -r checking for objdump... no checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... no checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm output from gcc object... ok checking for sysroot... no checking for mt... no checking if : is a manifest tool... no checking for dsymutil... dsymutil checking for nmedit... nmedit checking for lipo... lipo checking for otool... otool checking for otool64... no checking for -single_module linker flag... yes checking for -exported_symbols_list linker flag... yes checking for -force_load linker flag... yes checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... yes checking for gcc option to produce PIC... -fno-common -DPIC checking if gcc PIC flag -fno-common -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin13.3.0 dyld checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gcc... (cached) gcc checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking dependency style of gcc... (cached) gcc3 checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no checking whether the g++ linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fno-common -DPIC checking if g++ PIC flag -fno-common -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin13.3.0 dyld checking how to hardcode library paths into programs... immediate checking whether to enable maintainer-specific portions of Makefiles... no checking whether we are using the GNU Fortran 77 compiler... yes checking whether /sw/bin/gfortran-fsf-4.9 accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for /sw/bin/gfortran-fsf-4.9 option to produce PIC... -fno-common checking if /sw/bin/gfortran-fsf-4.9 PIC flag -fno-common works... yes checking if /sw/bin/gfortran-fsf-4.9 static flag -static works... no checking if /sw/bin/gfortran-fsf-4.9 supports -c -o file.o... yes checking if /sw/bin/gfortran-fsf-4.9 supports -c -o file.o... (cached) yes checking whether the /sw/bin/gfortran-fsf-4.9 linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin13.3.0 dyld checking how to hardcode library paths into programs... immediate checking for m4... /usr/bin/m4 configure: fortran/unix.m4 will be processed with m4 -D_gfort=1 checking for library containing cos... none required checking for MMDB_CCIF_Init in -lmmdb... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating libccp4c.pc config.status: creating libccp4f.pc config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands make m4 -D_gfort=1 fortran/unix.m4 > fortran/unix.f /Applications/Xcode.app/Contents/Developer/usr/bin/make all-am depbase=`echo ccp4/ccp4_array.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/ccp4_array.lo -MD -MP -MF $depbase.Tpo -c -o ccp4/ccp4_array.lo ccp4/ccp4_array.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo ccp4/cmap_data.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_data.lo -MD -MP -MF $depbase.Tpo -c -o ccp4/cmap_data.lo ccp4/cmap_data.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo ccp4/cmtzlib.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmtzlib.lo -MD -MP -MF $depbase.Tpo -c -o ccp4/cmtzlib.lo ccp4/cmtzlib.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo ccp4/ccp4_general.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/ccp4_general.lo -MD -MP -MF $depbase.Tpo -c -o ccp4/ccp4_general.lo ccp4/ccp4_general.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo ccp4/cmap_header.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_header.lo -MD -MP -MF $depbase.Tpo -c -o ccp4/cmap_header.lo ccp4/cmap_header.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo ccp4/csymlib.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/csymlib.lo -MD -MP -MF $depbase.Tpo -c -o ccp4/csymlib.lo ccp4/csymlib.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo ccp4/ccp4_parser.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/ccp4_parser.lo -MD -MP -MF $depbase.Tpo -c -o ccp4/ccp4_parser.lo ccp4/ccp4_parser.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo ccp4/cmap_labels.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_labels.lo -MD -MP -MF $depbase.Tpo -c -o ccp4/cmap_labels.lo ccp4/cmap_labels.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/ccp4_array.lo -MD -MP -MF ccp4/.deps/ccp4_array.Tpo -c ccp4/ccp4_array.c -fno-common -DPIC -o ccp4/.libs/ccp4_array.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_data.lo -MD -MP -MF ccp4/.deps/cmap_data.Tpo -c ccp4/cmap_data.c -fno-common -DPIC -o ccp4/.libs/cmap_data.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmtzlib.lo -MD -MP -MF ccp4/.deps/cmtzlib.Tpo -c ccp4/cmtzlib.c -fno-common -DPIC -o ccp4/.libs/cmtzlib.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/ccp4_general.lo -MD -MP -MF ccp4/.deps/ccp4_general.Tpo -c ccp4/ccp4_general.c -fno-common -DPIC -o ccp4/.libs/ccp4_general.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/ccp4_parser.lo -MD -MP -MF ccp4/.deps/ccp4_parser.Tpo -c ccp4/ccp4_parser.c -fno-common -DPIC -o ccp4/.libs/ccp4_parser.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_header.lo -MD -MP -MF ccp4/.deps/cmap_header.Tpo -c ccp4/cmap_header.c -fno-common -DPIC -o ccp4/.libs/cmap_header.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/csymlib.lo -MD -MP -MF ccp4/.deps/csymlib.Tpo -c ccp4/csymlib.c -fno-common -DPIC -o ccp4/.libs/csymlib.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_labels.lo -MD -MP -MF ccp4/.deps/cmap_labels.Tpo -c ccp4/cmap_labels.c -fno-common -DPIC -o ccp4/.libs/cmap_labels.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_header.lo -MD -MP -MF ccp4/.deps/cmap_header.Tpo -c ccp4/cmap_header.c -o ccp4/cmap_header.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/ccp4_array.lo -MD -MP -MF ccp4/.deps/ccp4_array.Tpo -c ccp4/ccp4_array.c -o ccp4/ccp4_array.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_labels.lo -MD -MP -MF ccp4/.deps/cmap_labels.Tpo -c ccp4/cmap_labels.c -o ccp4/cmap_labels.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_data.lo -MD -MP -MF ccp4/.deps/cmap_data.Tpo -c ccp4/cmap_data.c -o ccp4/cmap_data.o >/dev/null 2>&1 depbase=`echo ccp4/cvecmat.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cvecmat.lo -MD -MP -MF $depbase.Tpo -c -o ccp4/cvecmat.lo ccp4/cvecmat.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo ccp4/ccp4_program.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/ccp4_program.lo -MD -MP -MF $depbase.Tpo -c -o ccp4/ccp4_program.lo ccp4/ccp4_program.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo ccp4/cmap_open.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_open.lo -MD -MP -MF $depbase.Tpo -c -o ccp4/cmap_open.lo ccp4/cmap_open.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo ccp4/library_err.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/library_err.lo -MD -MP -MF $depbase.Tpo -c -o ccp4/library_err.lo ccp4/library_err.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/ccp4_general.lo -MD -MP -MF ccp4/.deps/ccp4_general.Tpo -c ccp4/ccp4_general.c -o ccp4/ccp4_general.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cvecmat.lo -MD -MP -MF ccp4/.deps/cvecmat.Tpo -c ccp4/cvecmat.c -fno-common -DPIC -o ccp4/.libs/cvecmat.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/ccp4_program.lo -MD -MP -MF ccp4/.deps/ccp4_program.Tpo -c ccp4/ccp4_program.c -fno-common -DPIC -o ccp4/.libs/ccp4_program.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_open.lo -MD -MP -MF ccp4/.deps/cmap_open.Tpo -c ccp4/cmap_open.c -fno-common -DPIC -o ccp4/.libs/cmap_open.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/library_err.lo -MD -MP -MF ccp4/.deps/library_err.Tpo -c ccp4/library_err.c -fno-common -DPIC -o ccp4/.libs/library_err.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/library_err.lo -MD -MP -MF ccp4/.deps/library_err.Tpo -c ccp4/library_err.c -o ccp4/library_err.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/ccp4_parser.lo -MD -MP -MF ccp4/.deps/ccp4_parser.Tpo -c ccp4/ccp4_parser.c -o ccp4/ccp4_parser.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_open.lo -MD -MP -MF ccp4/.deps/cmap_open.Tpo -c ccp4/cmap_open.c -o ccp4/cmap_open.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cvecmat.lo -MD -MP -MF ccp4/.deps/cvecmat.Tpo -c ccp4/cvecmat.c -o ccp4/cvecmat.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/ccp4_program.lo -MD -MP -MF ccp4/.deps/ccp4_program.Tpo -c ccp4/ccp4_program.c -o ccp4/ccp4_program.o >/dev/null 2>&1 depbase=`echo ccp4/ccp4_unitcell.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/ccp4_unitcell.lo -MD -MP -MF $depbase.Tpo -c -o ccp4/ccp4_unitcell.lo ccp4/ccp4_unitcell.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo ccp4/cmap_skew.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_skew.lo -MD -MP -MF $depbase.Tpo -c -o ccp4/cmap_skew.lo ccp4/cmap_skew.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo ccp4/library_file.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/library_file.lo -MD -MP -MF $depbase.Tpo -c -o ccp4/library_file.lo ccp4/library_file.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/ccp4_unitcell.lo -MD -MP -MF ccp4/.deps/ccp4_unitcell.Tpo -c ccp4/ccp4_unitcell.c -fno-common -DPIC -o ccp4/.libs/ccp4_unitcell.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_skew.lo -MD -MP -MF ccp4/.deps/cmap_skew.Tpo -c ccp4/cmap_skew.c -fno-common -DPIC -o ccp4/.libs/cmap_skew.o depbase=`echo ccp4/cmap_accessor.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_accessor.lo -MD -MP -MF $depbase.Tpo -c -o ccp4/cmap_accessor.lo ccp4/cmap_accessor.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo ccp4/cmap_stats.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_stats.lo -MD -MP -MF $depbase.Tpo -c -o ccp4/cmap_stats.lo ccp4/cmap_stats.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/library_file.lo -MD -MP -MF ccp4/.deps/library_file.Tpo -c ccp4/library_file.c -fno-common -DPIC -o ccp4/.libs/library_file.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_accessor.lo -MD -MP -MF ccp4/.deps/cmap_accessor.Tpo -c ccp4/cmap_accessor.c -fno-common -DPIC -o ccp4/.libs/cmap_accessor.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_stats.lo -MD -MP -MF ccp4/.deps/cmap_stats.Tpo -c ccp4/cmap_stats.c -fno-common -DPIC -o ccp4/.libs/cmap_stats.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/ccp4_unitcell.lo -MD -MP -MF ccp4/.deps/ccp4_unitcell.Tpo -c ccp4/ccp4_unitcell.c -o ccp4/ccp4_unitcell.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_skew.lo -MD -MP -MF ccp4/.deps/cmap_skew.Tpo -c ccp4/cmap_skew.c -o ccp4/cmap_skew.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/csymlib.lo -MD -MP -MF ccp4/.deps/csymlib.Tpo -c ccp4/csymlib.c -o ccp4/csymlib.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_stats.lo -MD -MP -MF ccp4/.deps/cmap_stats.Tpo -c ccp4/cmap_stats.c -o ccp4/cmap_stats.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_accessor.lo -MD -MP -MF ccp4/.deps/cmap_accessor.Tpo -c ccp4/cmap_accessor.c -o ccp4/cmap_accessor.o >/dev/null 2>&1 depbase=`echo ccp4/library_utils.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/library_utils.lo -MD -MP -MF $depbase.Tpo -c -o ccp4/library_utils.lo ccp4/library_utils.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo ccp4/cmap_close.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_close.lo -MD -MP -MF $depbase.Tpo -c -o ccp4/cmap_close.lo ccp4/cmap_close.c &&\ mv -f $depbase.Tpo $depbase.Plo depbase=`echo ccp4/cmap_symop.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_symop.lo -MD -MP -MF $depbase.Tpo -c -o ccp4/cmap_symop.lo ccp4/cmap_symop.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/library_utils.lo -MD -MP -MF ccp4/.deps/library_utils.Tpo -c ccp4/library_utils.c -fno-common -DPIC -o ccp4/.libs/library_utils.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_close.lo -MD -MP -MF ccp4/.deps/cmap_close.Tpo -c ccp4/cmap_close.c -fno-common -DPIC -o ccp4/.libs/cmap_close.o depbase=`echo ccp4/pack_c.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/pack_c.lo -MD -MP -MF $depbase.Tpo -c -o ccp4/pack_c.lo ccp4/pack_c.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_symop.lo -MD -MP -MF ccp4/.deps/cmap_symop.Tpo -c ccp4/cmap_symop.c -fno-common -DPIC -o ccp4/.libs/cmap_symop.o /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -I/sw/include -g -O2 -MT fortran/fortran_libccp4f_la-ccp4_diskio_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-ccp4_diskio_f.Tpo -c -o fortran/fortran_libccp4f_la-ccp4_diskio_f.lo `test -f 'fortran/ccp4_diskio_f.c' || echo './'`fortran/ccp4_diskio_f.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/pack_c.lo -MD -MP -MF ccp4/.deps/pack_c.Tpo -c ccp4/pack_c.c -fno-common -DPIC -o ccp4/.libs/pack_c.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_close.lo -MD -MP -MF ccp4/.deps/cmap_close.Tpo -c ccp4/cmap_close.c -o ccp4/cmap_close.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -I/sw/include -g -O2 -MT fortran/fortran_libccp4f_la-ccp4_diskio_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-ccp4_diskio_f.Tpo -c fortran/ccp4_diskio_f.c -fno-common -DPIC -o fortran/.libs/fortran_libccp4f_la-ccp4_diskio_f.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmap_symop.lo -MD -MP -MF ccp4/.deps/cmap_symop.Tpo -c ccp4/cmap_symop.c -o ccp4/cmap_symop.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/library_utils.lo -MD -MP -MF ccp4/.deps/library_utils.Tpo -c ccp4/library_utils.c -o ccp4/library_utils.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/library_file.lo -MD -MP -MF ccp4/.deps/library_file.Tpo -c ccp4/library_file.c -o ccp4/library_file.o >/dev/null 2>&1 /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -I/sw/include -g -O2 -MT fortran/fortran_libccp4f_la-ccp4_parser_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-ccp4_parser_f.Tpo -c -o fortran/fortran_libccp4f_la-ccp4_parser_f.lo `test -f 'fortran/ccp4_parser_f.c' || echo './'`fortran/ccp4_parser_f.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -I/sw/include -g -O2 -MT fortran/fortran_libccp4f_la-ccp4_parser_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-ccp4_parser_f.Tpo -c fortran/ccp4_parser_f.c -fno-common -DPIC -o fortran/.libs/fortran_libccp4f_la-ccp4_parser_f.o /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -I/sw/include -g -O2 -MT fortran/fortran_libccp4f_la-cmaplib_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-cmaplib_f.Tpo -c -o fortran/fortran_libccp4f_la-cmaplib_f.lo `test -f 'fortran/cmaplib_f.c' || echo './'`fortran/cmaplib_f.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -I/sw/include -g -O2 -MT fortran/fortran_libccp4f_la-cmaplib_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-cmaplib_f.Tpo -c fortran/cmaplib_f.c -fno-common -DPIC -o fortran/.libs/fortran_libccp4f_la-cmaplib_f.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -I/sw/include -g -O2 -MT fortran/fortran_libccp4f_la-ccp4_diskio_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-ccp4_diskio_f.Tpo -c fortran/ccp4_diskio_f.c -o fortran/fortran_libccp4f_la-ccp4_diskio_f.o >/dev/null 2>&1 /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -I/sw/include -g -O2 -MT fortran/fortran_libccp4f_la-csymlib_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-csymlib_f.Tpo -c -o fortran/fortran_libccp4f_la-csymlib_f.lo `test -f 'fortran/csymlib_f.c' || echo './'`fortran/csymlib_f.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -I/sw/include -g -O2 -MT fortran/fortran_libccp4f_la-ccp4_parser_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-ccp4_parser_f.Tpo -c fortran/ccp4_parser_f.c -o fortran/fortran_libccp4f_la-ccp4_parser_f.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -I/sw/include -g -O2 -MT fortran/fortran_libccp4f_la-csymlib_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-csymlib_f.Tpo -c fortran/csymlib_f.c -fno-common -DPIC -o fortran/.libs/fortran_libccp4f_la-csymlib_f.o mv -f fortran/.deps/fortran_libccp4f_la-ccp4_parser_f.Tpo fortran/.deps/fortran_libccp4f_la-ccp4_parser_f.Plo mv -f fortran/.deps/fortran_libccp4f_la-ccp4_diskio_f.Tpo fortran/.deps/fortran_libccp4f_la-ccp4_diskio_f.Plo /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -I/sw/include -g -O2 -MT fortran/fortran_libccp4f_la-ccp4_general_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-ccp4_general_f.Tpo -c -o fortran/fortran_libccp4f_la-ccp4_general_f.lo `test -f 'fortran/ccp4_general_f.c' || echo './'`fortran/ccp4_general_f.c /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -I/sw/include -g -O2 -MT fortran/fortran_libccp4f_la-ccp4_unitcell_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-ccp4_unitcell_f.Tpo -c -o fortran/fortran_libccp4f_la-ccp4_unitcell_f.lo `test -f 'fortran/ccp4_unitcell_f.c' || echo './'`fortran/ccp4_unitcell_f.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -I/sw/include -g -O2 -MT fortran/fortran_libccp4f_la-ccp4_general_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-ccp4_general_f.Tpo -c fortran/ccp4_general_f.c -fno-common -DPIC -o fortran/.libs/fortran_libccp4f_la-ccp4_general_f.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -I/sw/include -g -O2 -MT fortran/fortran_libccp4f_la-ccp4_unitcell_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-ccp4_unitcell_f.Tpo -c fortran/ccp4_unitcell_f.c -fno-common -DPIC -o fortran/.libs/fortran_libccp4f_la-ccp4_unitcell_f.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/pack_c.lo -MD -MP -MF ccp4/.deps/pack_c.Tpo -c ccp4/pack_c.c -o ccp4/pack_c.o >/dev/null 2>&1 /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -I/sw/include -g -O2 -MT fortran/fortran_libccp4f_la-cmtzlib_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-cmtzlib_f.Tpo -c -o fortran/fortran_libccp4f_la-cmtzlib_f.lo `test -f 'fortran/cmtzlib_f.c' || echo './'`fortran/cmtzlib_f.c fortran/ccp4_general_f.c:88:3: warning: implicit declaration of function 'outbuf_' is invalid in C99 [-Wimplicit-function-declaration] FORTRAN_CALL(OUTBUF,outbuf,(),(),()); ^ ./ccp4/ccp4_fortran.h:187:5: note: expanded from macro 'FORTRAN_CALL' name##_ p_sun ^ :75:1: note: expanded from here outbuf_ ^ fortran/ccp4_general_f.c:114:5: warning: implicit declaration of function '_gfortran_getarg_i4' is invalid in C99 [-Wimplicit-function-declaration] _gfortran_getarg_i4(&i,arg,arg_len); ^ fortran/ccp4_general_f.c:145:3: warning: implicit declaration of function 'ccp4h_init_' is invalid in C99 [-Wimplicit-function-declaration] FORTRAN_CALL (CCP4H_INIT, ccp4h_init, (), (), ()); ^ ./ccp4/ccp4_fortran.h:187:5: note: expanded from macro 'FORTRAN_CALL' name##_ p_sun ^ :75:1: note: expanded from here ccp4h_init_ ^ fortran/ccp4_general_f.c:218:3: warning: implicit declaration of function 'ccp4_fflush_stdout_' is invalid in C99 [-Wimplicit-function-declaration] FORTRAN_CALL (CCP4_FFLUSH_STDOUT, ccp4_fflush_stdout, (), (), ()); ^ ./ccp4/ccp4_fortran.h:187:5: note: expanded from macro 'FORTRAN_CALL' name##_ p_sun ^ :75:1: note: expanded from here ccp4_fflush_stdout_ ^ fortran/ccp4_general_f.c:222:5: warning: implicit declaration of function 'ccp4h_summary_beg_' is invalid in C99 [-Wimplicit-function-declaration] FORTRAN_CALL (CCP4H_SUMMARY_BEG, ccp4h_summary_beg, (), (), ()); ^ ./ccp4/ccp4_fortran.h:187:5: note: expanded from macro 'FORTRAN_CALL' name##_ p_sun ^ :75:1: note: expanded from here ccp4h_summary_beg_ ^ fortran/ccp4_general_f.c:230:5: warning: implicit declaration of function 'ccp4h_summary_end_' is invalid in C99 [-Wimplicit-function-declaration] FORTRAN_CALL (CCP4H_SUMMARY_END, ccp4h_summary_end, (), (), ()); ^ ./ccp4/ccp4_fortran.h:187:5: note: expanded from macro 'FORTRAN_CALL' name##_ p_sun ^ :75:1: note: expanded from here ccp4h_summary_end_ ^ fortran/ccp4_general_f.c:376:3: warning: implicit declaration of function 'ccp4h_pre_beg_' is invalid in C99 [-Wimplicit-function-declaration] FORTRAN_CALL (CCP4H_PRE_BEG, ccp4h_pre_beg, (), (), ()); ^ ./ccp4/ccp4_fortran.h:187:5: note: expanded from macro 'FORTRAN_CALL' name##_ p_sun ^ :75:1: note: expanded from here ccp4h_pre_beg_ ^ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -I/sw/include -g -O2 -MT fortran/fortran_libccp4f_la-ccp4_unitcell_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-ccp4_unitcell_f.Tpo -c fortran/ccp4_unitcell_f.c -o fortran/fortran_libccp4f_la-ccp4_unitcell_f.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -I/sw/include -g -O2 -MT fortran/fortran_libccp4f_la-cmtzlib_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-cmtzlib_f.Tpo -c fortran/cmtzlib_f.c -fno-common -DPIC -o fortran/.libs/fortran_libccp4f_la-cmtzlib_f.o /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./ccp4 -I/sw/include -g -O2 -MT fortran/fortran_libccp4f_la-library_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-library_f.Tpo -c -o fortran/fortran_libccp4f_la-library_f.lo `test -f 'fortran/library_f.c' || echo './'`fortran/library_f.c 7 warnings generated. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -I/sw/include -g -O2 -MT fortran/fortran_libccp4f_la-ccp4_general_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-ccp4_general_f.Tpo -c fortran/ccp4_general_f.c -o fortran/fortran_libccp4f_la-ccp4_general_f.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -I/sw/include -g -O2 -MT fortran/fortran_libccp4f_la-library_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-library_f.Tpo -c fortran/library_f.c -fno-common -DPIC -o fortran/.libs/fortran_libccp4f_la-library_f.o fortran/cmtzlib_f.c:152:3: warning: implicit declaration of function 'ccp4h_init_lib_' is invalid in C99 [-Wimplicit-function-declaration] FORTRAN_CALL (CCP4H_INIT_LIB, ccp4h_init_lib, (&ihtml,&isumm), (&ihtml,&isumm), (&ihtml,&isumm)); ^ ./ccp4/ccp4_fortran.h:187:5: note: expanded from macro 'FORTRAN_CALL' name##_ p_sun ^ :73:1: note: expanded from here ccp4h_init_lib_ ^ fortran/cmtzlib_f.c:277:43: warning: incompatible pointer types passing 'fpstr' (aka 'char *') to parameter of type 'char (*)[80]' [-Wincompatible-pointer-types] *nlines = ccp4_lrhist(mtzdata[*mindx-1], hstrng, *nlines); ^~~~~~ ./ccp4/cmtzlib.h:668:38: note: passing argument to parameter 'history' here int ccp4_lrhist(const MTZ *mtz, char history[][MTZRECORDLENGTH], int nlines); ^ fortran/cmtzlib_f.c:632:31: warning: incompatible pointer types passing 'char *' to parameter of type 'const char (*)[31]' [-Wincompatible-pointer-types] if (MtzParseLabin(temp_name,label,*nlprgi,user_label_in[*mindx-1]) == -1) ^~~~~ ./ccp4/cmtzlib.h:738:48: note: passing argument to parameter 'prog_labels' here int MtzParseLabin(char *labin_line, const char prog_labels[][31], ^ fortran/cmtzlib_f.c:686:31: warning: incompatible pointer types passing 'char *' to parameter of type 'const char (*)[31]' [-Wincompatible-pointer-types] if (MtzParseLabin(temp_name,label,*nlprgo,user_label_out[*mindx-1]) == -1) ^~~~~ ./ccp4/cmtzlib.h:738:48: note: passing argument to parameter 'prog_labels' here int MtzParseLabin(char *labin_line, const char prog_labels[][31], ^ fortran/cmtzlib_f.c:731:31: warning: incompatible pointer types passing 'char *' to parameter of type 'const char (*)[31]' [-Wincompatible-pointer-types] if (MtzParseLabin(temp_name,label,*nlprgi,user_lab) == -1) ^~~~~ ./ccp4/cmtzlib.h:738:48: note: passing argument to parameter 'prog_labels' here int MtzParseLabin(char *labin_line, const char prog_labels[][31], ^ fortran/cmtzlib_f.c:731:45: warning: incompatible pointer types passing 'char *' to parameter of type 'char (*)[2][31]' [-Wincompatible-pointer-types] if (MtzParseLabin(temp_name,label,*nlprgi,user_lab) == -1) ^~~~~~~~ ./ccp4/cmtzlib.h:739:28: note: passing argument to parameter 'user_labels' here const int nlprgi, char user_labels[][2][31]); ^ fortran/cmtzlib_f.c:830:44: warning: incompatible pointer types passing 'char *' to parameter of type 'const char (*)[31]' [-Wincompatible-pointer-types] colarray = ccp4_lrassn(mtzdata[*mindx-1],label,*nlprgi,type); ^~~~~ ./ccp4/cmtzlib.h:754:49: note: passing argument to parameter 'labels' here MTZCOL **ccp4_lrassn(const MTZ *mtz, const char labels[][31], const int nlabels, ^ fortran/cmtzlib_f.c:830:58: warning: incompatible pointer types passing 'char *' to parameter of type 'char (*)[3]' [-Wincompatible-pointer-types] colarray = ccp4_lrassn(mtzdata[*mindx-1],label,*nlprgi,type); ^~~~ ./ccp4/cmtzlib.h:755:8: note: passing argument to parameter 'types' here char types[][3]); ^ fortran/cmtzlib_f.c:1210:14: warning: passing 'MTZCOL *[10000]' to parameter of type 'const MTZCOL **' discards qualifiers in nested pointer types [-Wincompatible-pointer-types-discards-qualifiers] collookup[mindex-1], ndatmss[mindex-1], irref[mindex-1]); ^~~~~~~~~~~~~~~~~~~ ./ccp4/cmtzlib.h:808:17: note: passing argument to parameter 'lookup' here const MTZCOL *lookup[], const int ncols, const int iref); ^ mv -f fortran/.deps/fortran_libccp4f_la-ccp4_unitcell_f.Tpo fortran/.deps/fortran_libccp4f_la-ccp4_unitcell_f.Plo /bin/sh ./libtool --tag=F77 --mode=compile /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c -o fortran/ccplib.lo fortran/ccplib.f fortran/cmtzlib_f.c:1807:35: warning: incompatible pointer types passing 'fpstr' (aka 'char *') to parameter of type 'const char (*)[80]' [-Wincompatible-pointer-types] MtzAddHistory(mtzdata[*mindx-1], hstrng, *nlines); ^~~~~~ ./ccp4/cmtzlib.h:875:40: note: passing argument to parameter 'history' here int MtzAddHistory(MTZ *mtz, const char history[][MTZRECORDLENGTH], const int nlines); ^ fortran/cmtzlib_f.c:1859:35: warning: incompatible pointer types passing 'char [80]' to parameter of type 'const char (*)[80]'; take the address with & [-Wincompatible-pointer-types] MtzAddHistory(mtzdata[*mindx-1], hline, 1); ^~~~~ & ./ccp4/cmtzlib.h:875:40: note: passing argument to parameter 'history' here int MtzAddHistory(MTZ *mtz, const char history[][MTZRECORDLENGTH], const int nlines); ^ fortran/cmtzlib_f.c:2432:46: warning: incompatible pointer types passing 'char *' to parameter of type 'const char (*)[31]' [-Wincompatible-pointer-types] colarray = ccp4_lwassn(mtzdata[*mindx-1],label,*nlprgo,type,*iappnd); ^~~~~ ./ccp4/cmtzlib.h:935:43: note: passing argument to parameter 'labels' here MTZCOL **ccp4_lwassn(MTZ *mtz, const char labels[][31], const int nlabels, ^ fortran/cmtzlib_f.c:2432:60: warning: incompatible pointer types passing 'char *' to parameter of type 'const char (*)[3]' [-Wincompatible-pointer-types] colarray = ccp4_lwassn(mtzdata[*mindx-1],label,*nlprgo,type,*iappnd); ^~~~ ./ccp4/cmtzlib.h:936:25: note: passing argument to parameter 'types' here const char types[][3], const int iappnd); ^ fortran/cmtzlib_f.c:2510:44: warning: incompatible pointer types passing 'char *' to parameter of type 'const char (*)[31]' [-Wincompatible-pointer-types] colarray = ccp4_lwassn(mtzdata[*mindx-1],label,*nlprgo,type,*iappnd); ^~~~~ ./ccp4/cmtzlib.h:935:43: note: passing argument to parameter 'labels' here MTZCOL **ccp4_lwassn(MTZ *mtz, const char labels[][31], const int nlabels, ^ fortran/cmtzlib_f.c:2510:58: warning: incompatible pointer types passing 'char *' to parameter of type 'const char (*)[3]' [-Wincompatible-pointer-types] colarray = ccp4_lwassn(mtzdata[*mindx-1],label,*nlprgo,type,*iappnd); ^~~~ ./ccp4/cmtzlib.h:936:25: note: passing argument to parameter 'types' here const char types[][3], const int iappnd); ^ mv -f fortran/.deps/fortran_libccp4f_la-ccp4_general_f.Tpo fortran/.deps/fortran_libccp4f_la-ccp4_general_f.Plo /bin/sh ./libtool --tag=F77 --mode=compile /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c -o fortran/fftlib.lo fortran/fftlib.f libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/ccplib.f -fno-common -o fortran/.libs/ccplib.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -I/sw/include -g -O2 -MT fortran/fortran_libccp4f_la-csymlib_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-csymlib_f.Tpo -c fortran/csymlib_f.c -o fortran/fortran_libccp4f_la-csymlib_f.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -I/sw/include -g -O2 -MT fortran/fortran_libccp4f_la-library_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-library_f.Tpo -c fortran/library_f.c -o fortran/fortran_libccp4f_la-library_f.o >/dev/null 2>&1 libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/fftlib.f -fno-common -o fortran/.libs/fftlib.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -I/sw/include -g -O2 -MT fortran/fortran_libccp4f_la-cmaplib_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-cmaplib_f.Tpo -c fortran/cmaplib_f.c -o fortran/fortran_libccp4f_la-cmaplib_f.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I/sw/include -g -O2 -MT ccp4/cmtzlib.lo -MD -MP -MF ccp4/.deps/cmtzlib.Tpo -c ccp4/cmtzlib.c -o ccp4/cmtzlib.o >/dev/null 2>&1 /bin/sh ./libtool --tag=F77 --mode=compile /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c -o fortran/modlib.lo fortran/modlib.f libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/modlib.f -fno-common -o fortran/.libs/modlib.o mv -f fortran/.deps/fortran_libccp4f_la-library_f.Tpo fortran/.deps/fortran_libccp4f_la-library_f.Plo /bin/sh ./libtool --tag=F77 --mode=compile /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c -o fortran/parser.lo fortran/parser.f libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/parser.f -fno-common -o fortran/.libs/parser.o mv -f fortran/.deps/fortran_libccp4f_la-csymlib_f.Tpo fortran/.deps/fortran_libccp4f_la-csymlib_f.Plo /bin/sh ./libtool --tag=F77 --mode=compile /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c -o fortran/rwbrook.lo fortran/rwbrook.f libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/rwbrook.f -fno-common -o fortran/.libs/rwbrook.o 15 warnings generated. mv -f fortran/.deps/fortran_libccp4f_la-cmaplib_f.Tpo fortran/.deps/fortran_libccp4f_la-cmaplib_f.Plo /bin/sh ./libtool --tag=F77 --mode=compile /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c -o fortran/libhtml.lo fortran/libhtml.f libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./ccp4 -I/sw/include -g -O2 -MT fortran/fortran_libccp4f_la-cmtzlib_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-cmtzlib_f.Tpo -c fortran/cmtzlib_f.c -o fortran/fortran_libccp4f_la-cmtzlib_f.o >/dev/null 2>&1 libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/libhtml.f -fno-common -o fortran/.libs/libhtml.o libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/libhtml.f -o fortran/libhtml.o >/dev/null 2>&1 libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/parser.f -o fortran/parser.o >/dev/null 2>&1 libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/ccplib.f -o fortran/ccplib.o >/dev/null 2>&1 /bin/sh ./libtool --tag=F77 --mode=compile /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c -o fortran/keyparse.lo fortran/keyparse.f libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/keyparse.f -fno-common -o fortran/.libs/keyparse.o libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/modlib.f -o fortran/modlib.o >/dev/null 2>&1 libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/fftlib.f -o fortran/fftlib.o >/dev/null 2>&1 /bin/sh ./libtool --tag=F77 --mode=compile /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c -o fortran/dna_output.lo fortran/dna_output.f libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/rwbrook.f -o fortran/rwbrook.o >/dev/null 2>&1 libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/dna_output.f -fno-common -o fortran/.libs/dna_output.o libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/keyparse.f -o fortran/keyparse.o >/dev/null 2>&1 /bin/sh ./libtool --tag=F77 --mode=compile /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c -o fortran/pack_f.lo fortran/pack_f.f libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/dna_output.f -o fortran/dna_output.o >/dev/null 2>&1 libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/pack_f.f -fno-common -o fortran/.libs/pack_f.o mv -f fortran/.deps/fortran_libccp4f_la-cmtzlib_f.Tpo fortran/.deps/fortran_libccp4f_la-cmtzlib_f.Plo /bin/sh ./libtool --tag=F77 --mode=compile /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c -o fortran/pxxml.lo fortran/pxxml.f /bin/sh ./libtool --tag=F77 --mode=compile /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c -o fortran/lgglib.lo fortran/lgglib.f libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/pack_f.f -o fortran/pack_f.o >/dev/null 2>&1 /bin/sh ./libtool --tag=F77 --mode=compile /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c -o fortran/plot84lib.lo fortran/plot84lib.f libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/pxxml.f -fno-common -o fortran/.libs/pxxml.o libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/lgglib.f -fno-common -o fortran/.libs/lgglib.o /bin/sh ./libtool --tag=F77 --mode=compile /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c -o fortran/plotsubs.lo fortran/plotsubs.f libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/plot84lib.f -fno-common -o fortran/.libs/plot84lib.o /bin/sh ./libtool --tag=F77 --mode=compile /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c -o fortran/sorting_main.lo fortran/sorting_main.f libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/plotsubs.f -fno-common -o fortran/.libs/plotsubs.o libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/pxxml.f -o fortran/pxxml.o >/dev/null 2>&1 libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/sorting_main.f -fno-common -o fortran/.libs/sorting_main.o fortran/lgglib.f:1239.72: CALL matmult(3,3,3,1,ORTH,B3,XYZ,B1) 1 Warning: More actual than formal arguments in procedure call at (1) fortran/lgglib.f:1277.72: CALL matmult(3,3,3,1,ORTH,B3,XYZ,B1) 1 Warning: More actual than formal arguments in procedure call at (1) fortran/lgglib.f:1315.72: 1 , (X(I,NATM),I=1,3) 1 Warning: Branch at (1) may result in an infinite loop fortran/lgglib.f:1369.72: 1 , (X(I,NATM),I=1,3),occ(natm),bfac(natm) 1 Warning: Branch at (1) may result in an infinite loop fortran/lgglib.f:1429.72: 1 , (X(I,NATM),I=1,3),occ(natm),bfac(natm) 1 Warning: Branch at (1) may result in an infinite loop fortran/lgglib.f:1489.72: 1 res(natm), (X(I,NATM),I=1,3),occ(natm),bfac(natm) 1 Warning: Branch at (1) may result in an infinite loop fortran/lgglib.f:1546.72: 1 , (X(I,NATM),I=1,3) 1 Warning: Branch at (1) may result in an infinite loop fortran/lgglib.f:1598.72: 1 SEQ(NATM), RES(NATM), ATOM(NATM) 1 Warning: Branch at (1) may result in an infinite loop /bin/sh ./libtool --tag=F77 --mode=compile /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c -o fortran/unix.lo fortran/unix.f /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -no-undefined -L/sw/lib/gcc4.9/lib -L/sw/lib -L/usr/lib -o ccp4/libccp4c.la -rpath /sw/lib ccp4/ccp4_array.lo ccp4/cmap_data.lo ccp4/cmtzlib.lo ccp4/ccp4_general.lo ccp4/cmap_header.lo ccp4/csymlib.lo ccp4/ccp4_parser.lo ccp4/cmap_labels.lo ccp4/cvecmat.lo ccp4/ccp4_program.lo ccp4/cmap_open.lo ccp4/library_err.lo ccp4/ccp4_unitcell.lo ccp4/cmap_skew.lo ccp4/library_file.lo ccp4/cmap_accessor.lo ccp4/cmap_stats.lo ccp4/library_utils.lo ccp4/cmap_close.lo ccp4/cmap_symop.lo ccp4/pack_c.lo libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/unix.f -fno-common -o fortran/.libs/unix.o libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/plotsubs.f -o fortran/plotsubs.o >/dev/null 2>&1 libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/sorting_main.f -o fortran/sorting_main.o >/dev/null 2>&1 libtool: link: gcc -dynamiclib -o ccp4/.libs/libccp4c.0.dylib ccp4/.libs/ccp4_array.o ccp4/.libs/cmap_data.o ccp4/.libs/cmtzlib.o ccp4/.libs/ccp4_general.o ccp4/.libs/cmap_header.o ccp4/.libs/csymlib.o ccp4/.libs/ccp4_parser.o ccp4/.libs/cmap_labels.o ccp4/.libs/cvecmat.o ccp4/.libs/ccp4_program.o ccp4/.libs/cmap_open.o ccp4/.libs/library_err.o ccp4/.libs/ccp4_unitcell.o ccp4/.libs/cmap_skew.o ccp4/.libs/library_file.o ccp4/.libs/cmap_accessor.o ccp4/.libs/cmap_stats.o ccp4/.libs/library_utils.o ccp4/.libs/cmap_close.o ccp4/.libs/cmap_symop.o ccp4/.libs/pack_c.o -L/sw/lib/gcc4.9/lib -L/sw/lib -L/usr/lib -O2 -install_name /sw/lib/libccp4c.0.dylib -compatibility_version 1 -current_version 1.0 -Wl,-single_module libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/unix.f -o fortran/unix.o >/dev/null 2>&1 fortran/plot84lib.f:8152.72: CALL GSTRIL(GSFIL,LISFIL) 1 Warning: Missing actual argument for argument 'ioflag' at (1) fortran/plot84lib.f:8301.22: CALL AXIS(X,Y,HTEXT,NCHAR,AXLEN,ANGLE,FVAL,DV) 1 Warning: Rank mismatch in argument 'label' at (1) (scalar and rank-1) fortran/plot84lib.f:10426.19: CALL TRIPLOT(ICLEAR,1) 1 Warning: Rank mismatch in argument 'line' at (1) (rank-1 and scalar) libtool: link: (cd "ccp4/.libs" && rm -f "libccp4c.dylib" && ln -s "libccp4c.0.dylib" "libccp4c.dylib") libtool: link: ar cru ccp4/.libs/libccp4c.a ccp4/ccp4_array.o ccp4/cmap_data.o ccp4/cmtzlib.o ccp4/ccp4_general.o ccp4/cmap_header.o ccp4/csymlib.o ccp4/ccp4_parser.o ccp4/cmap_labels.o ccp4/cvecmat.o ccp4/ccp4_program.o ccp4/cmap_open.o ccp4/library_err.o ccp4/ccp4_unitcell.o ccp4/cmap_skew.o ccp4/library_file.o ccp4/cmap_accessor.o ccp4/cmap_stats.o ccp4/library_utils.o ccp4/cmap_close.o ccp4/cmap_symop.o ccp4/pack_c.o libtool: link: ranlib ccp4/.libs/libccp4c.a libtool: link: ( cd "ccp4/.libs" && rm -f "libccp4c.la" && ln -s "../libccp4c.la" "libccp4c.la" ) libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/lgglib.f -o fortran/lgglib.o >/dev/null 2>&1 libtool: compile: /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -c fortran/plot84lib.f -o fortran/plot84lib.o >/dev/null 2>&1 /bin/sh ./libtool --tag=F77 --mode=link /sw/bin/gfortran-fsf-4.9 -fno-second-underscore -L/sw/lib/gcc4.9/lib -lgfortran -no-undefined -L/sw/lib/gcc4.9/lib -L/sw/lib -L/usr/lib -o fortran/libccp4f.la -rpath /sw/lib fortran/fortran_libccp4f_la-ccp4_diskio_f.lo fortran/fortran_libccp4f_la-ccp4_parser_f.lo fortran/fortran_libccp4f_la-cmaplib_f.lo fortran/fortran_libccp4f_la-csymlib_f.lo fortran/fortran_libccp4f_la-ccp4_general_f.lo fortran/fortran_libccp4f_la-ccp4_unitcell_f.lo fortran/fortran_libccp4f_la-cmtzlib_f.lo fortran/fortran_libccp4f_la-library_f.lo fortran/ccplib.lo fortran/fftlib.lo fortran/modlib.lo fortran/parser.lo fortran/rwbrook.lo fortran/libhtml.lo fortran/keyparse.lo fortran/dna_output.lo fortran/pack_f.lo fortran/pxxml.lo fortran/lgglib.lo fortran/plot84lib.lo fortran/plotsubs.lo fortran/sorting_main.lo fortran/unix.lo ccp4/libccp4c.la -lmmdb libtool: link: /sw/bin/gfortran-fsf-4.9 -dynamiclib -o fortran/.libs/libccp4f.0.dylib fortran/.libs/fortran_libccp4f_la-ccp4_diskio_f.o fortran/.libs/fortran_libccp4f_la-ccp4_parser_f.o fortran/.libs/fortran_libccp4f_la-cmaplib_f.o fortran/.libs/fortran_libccp4f_la-csymlib_f.o fortran/.libs/fortran_libccp4f_la-ccp4_general_f.o fortran/.libs/fortran_libccp4f_la-ccp4_unitcell_f.o fortran/.libs/fortran_libccp4f_la-cmtzlib_f.o fortran/.libs/fortran_libccp4f_la-library_f.o fortran/.libs/ccplib.o fortran/.libs/fftlib.o fortran/.libs/modlib.o fortran/.libs/parser.o fortran/.libs/rwbrook.o fortran/.libs/libhtml.o fortran/.libs/keyparse.o fortran/.libs/dna_output.o fortran/.libs/pack_f.o fortran/.libs/pxxml.o fortran/.libs/lgglib.o fortran/.libs/plot84lib.o fortran/.libs/plotsubs.o fortran/.libs/sorting_main.o fortran/.libs/unix.o -L/sw/lib/gcc4.9/lib /sw/lib/gcc4.9/lib/libgfortran.dylib -L/sw/lib -L/usr/lib ccp4/.libs/libccp4c.dylib /sw/lib/libmmdb.dylib -install_name /sw/lib/libccp4f.0.dylib -compatibility_version 1 -current_version 1.0 -Wl,-single_module libtool: link: (cd "fortran/.libs" && rm -f "libccp4f.dylib" && ln -s "libccp4f.0.dylib" "libccp4f.dylib") libtool: link: ar cru fortran/.libs/libccp4f.a fortran/fortran_libccp4f_la-ccp4_diskio_f.o fortran/fortran_libccp4f_la-ccp4_parser_f.o fortran/fortran_libccp4f_la-cmaplib_f.o fortran/fortran_libccp4f_la-csymlib_f.o fortran/fortran_libccp4f_la-ccp4_general_f.o fortran/fortran_libccp4f_la-ccp4_unitcell_f.o fortran/fortran_libccp4f_la-cmtzlib_f.o fortran/fortran_libccp4f_la-library_f.o fortran/ccplib.o fortran/fftlib.o fortran/modlib.o fortran/parser.o fortran/rwbrook.o fortran/libhtml.o fortran/keyparse.o fortran/dna_output.o fortran/pack_f.o fortran/pxxml.o fortran/lgglib.o fortran/plot84lib.o fortran/plotsubs.o fortran/sorting_main.o fortran/unix.o libtool: link: ranlib fortran/.libs/libccp4f.a libtool: link: ( cd "fortran/.libs" && rm -f "libccp4f.la" && ln -s "../libccp4f.la" "libccp4f.la" ) /bin/rm -rf /sw/build.build/root-libccp4-6.4.0-rc1-2 /bin/mkdir -p /sw/build.build/root-libccp4-6.4.0-rc1-2/sw /bin/mkdir -p /sw/build.build/root-libccp4-6.4.0-rc1-2/DEBIAN /usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-libccp4-6.4.0-rc1-2 sudo -u fink-bld [ENV] sh -c /tmp/fink.jZgc4 make install DESTDIR=/sw/build.build/root-libccp4-6.4.0-rc1-2 /Applications/Xcode.app/Contents/Developer/usr/bin/make install-am build-aux/install-sh -c -d '/sw/build.build/root-libccp4-6.4.0-rc1-2/sw/lib' /bin/sh ./libtool --mode=install /usr/bin/install -c ccp4/libccp4c.la fortran/libccp4f.la '/sw/build.build/root-libccp4-6.4.0-rc1-2/sw/lib' libtool: install: /usr/bin/install -c ccp4/.libs/libccp4c.0.dylib /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/lib/libccp4c.0.dylib libtool: install: (cd /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/lib && { ln -s -f libccp4c.0.dylib libccp4c.dylib || { rm -f libccp4c.dylib && ln -s libccp4c.0.dylib libccp4c.dylib; }; }) libtool: install: /usr/bin/install -c ccp4/.libs/libccp4c.lai /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/lib/libccp4c.la libtool: install: /usr/bin/install -c fortran/.libs/libccp4f.0.dylib /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/lib/libccp4f.0.dylib libtool: install: (cd /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/lib && { ln -s -f libccp4f.0.dylib libccp4f.dylib || { rm -f libccp4f.dylib && ln -s libccp4f.0.dylib libccp4f.dylib; }; }) libtool: install: /usr/bin/install -c fortran/.libs/libccp4f.lai /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/lib/libccp4f.la libtool: install: /usr/bin/install -c ccp4/.libs/libccp4c.a /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/lib/libccp4c.a libtool: install: chmod 644 /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/lib/libccp4c.a libtool: install: ranlib /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/lib/libccp4c.a libtool: install: /usr/bin/install -c fortran/.libs/libccp4f.a /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/lib/libccp4f.a libtool: install: chmod 644 /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/lib/libccp4f.a libtool: install: ranlib /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/lib/libccp4f.a libtool: install: warning: remember to run `libtool --finish /sw/lib' build-aux/install-sh -c -d '/sw/build.build/root-libccp4-6.4.0-rc1-2/sw/include/ccp4' /usr/bin/install -c -m 644 ccp4/ccp4_file_err.h ccp4/ccp4_program.h ccp4/ccp4_unitcell.h ccp4/cmap_errno.h ccp4/cmap_stats.h ccp4/csymlib.h ccp4/library_file.h ccp4/w32mvs.h ccp4/ccp4_fortran.h ccp4/ccp4_spg.h ccp4/ccp4_utils.h ccp4/cmap_header.h ccp4/cmaplib.h ccp4/cvecmat.h ccp4/mtzdata.h ccp4/ccp4_array.h ccp4/ccp4_general.h ccp4/ccp4_sysdep.h ccp4/ccp4_vars.h ccp4/cmap_labels.h ccp4/cmaplib_f.h ccp4/overview.h ccp4/ccp4_errno.h ccp4/ccp4_parser.h ccp4/ccp4_types.h ccp4/cmap_data.h ccp4/cmap_skew.h ccp4/cmtzlib.h ccp4/pack_c.h '/sw/build.build/root-libccp4-6.4.0-rc1-2/sw/include/ccp4' build-aux/install-sh -c -d '/sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/ccp4' /usr/bin/install -c -m 644 ccp4-config.cmake '/sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/ccp4' build-aux/install-sh -c -d '/sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share' /usr/bin/install -c -m 644 data/atomsf_neutron.lib data/atomsf.lib data/syminfo.lib data/symop.lib data/font84.ascii '/sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share' build-aux/install-sh -c -d '/sw/build.build/root-libccp4-6.4.0-rc1-2/sw/lib/pkgconfig' /usr/bin/install -c -m 644 libccp4c.pc libccp4f.pc '/sw/build.build/root-libccp4-6.4.0-rc1-2/sw/lib/pkgconfig' mkdir -p /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/ccp4 cp ../prodrg.param /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/ccp4/. cp ../ccp4srs-data-20120621/index.srs /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/ccp4/. cp ../ccp4srs-data-20120621/graph.srs /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/ccp4/. cp ../ccp4srs-data-20120621/struct.srs /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/ccp4/. cp data/atomsf.lib /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/ccp4/. cp data/atomsf_neutron.lib /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/ccp4/. cp data/font84.ascii /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/ccp4/. cp data/syminfo.lib /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/ccp4/. cp data/symop.lib /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/ccp4/. sudo -u fink-bld [ENV] sh -c /tmp/fink.gV_te /usr/bin/install -d -m 700 /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/doc/libccp4 /bin/cp -r COPYING.LESSER /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/doc/libccp4/ /bin/cp -r COPYING /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/doc/libccp4/ /bin/chmod -R go=u-w /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/doc/libccp4 /bin/rm -f /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/info/dir /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/info/dir.old /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/info/dir /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/info/dir.old /bin/rm -rf /sw/build.build/root-libccp4-shlibs-6.4.0-rc1-2 /bin/mkdir -p /sw/build.build/root-libccp4-shlibs-6.4.0-rc1-2/sw /bin/mkdir -p /sw/build.build/root-libccp4-shlibs-6.4.0-rc1-2/DEBIAN /usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-libccp4-shlibs-6.4.0-rc1-2 sudo -u fink-bld [ENV] sh -c /tmp/fink.skLW5 /usr/bin/install -d -m 755 /sw/build.build/root-libccp4-shlibs-6.4.0-rc1-2/sw/lib /bin/mv /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/lib/libccp4c.0.dylib /sw/build.build/root-libccp4-shlibs-6.4.0-rc1-2/sw/lib/ /bin/mv /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/lib/libccp4f.0.dylib /sw/build.build/root-libccp4-shlibs-6.4.0-rc1-2/sw/lib/ /bin/rm -f /sw/build.build/root-libccp4-shlibs-6.4.0-rc1-2/sw/info/dir /sw/build.build/root-libccp4-shlibs-6.4.0-rc1-2/sw/info/dir.old /sw/build.build/root-libccp4-shlibs-6.4.0-rc1-2/sw/share/info/dir /sw/build.build/root-libccp4-shlibs-6.4.0-rc1-2/sw/share/info/dir.old /bin/rm -rf /sw/build.build/root-libccp4-dev-6.4.0-rc1-2 /bin/mkdir -p /sw/build.build/root-libccp4-dev-6.4.0-rc1-2/sw /bin/mkdir -p /sw/build.build/root-libccp4-dev-6.4.0-rc1-2/DEBIAN /usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-libccp4-dev-6.4.0-rc1-2 sudo -u fink-bld [ENV] sh -c /tmp/fink.klsFD /usr/bin/install -d -m 755 /sw/build.build/root-libccp4-dev-6.4.0-rc1-2/sw/lib /bin/mv /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/lib/*.a /sw/build.build/root-libccp4-dev-6.4.0-rc1-2/sw/lib/ /bin/mv /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/lib/*.la /sw/build.build/root-libccp4-dev-6.4.0-rc1-2/sw/lib/ /usr/bin/install -d -m 755 /sw/build.build/root-libccp4-dev-6.4.0-rc1-2/sw/include/ccp4 /bin/mv /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/include/ccp4/*.h /sw/build.build/root-libccp4-dev-6.4.0-rc1-2/sw/include/ccp4/ /bin/mv /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/lib/libccp4c.dylib /sw/build.build/root-libccp4-dev-6.4.0-rc1-2/sw/lib/ /bin/mv /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/lib/libccp4f.dylib /sw/build.build/root-libccp4-dev-6.4.0-rc1-2/sw/lib/ /usr/bin/install -d -m 755 /sw/build.build/root-libccp4-dev-6.4.0-rc1-2/sw/lib/pkgconfig /bin/mv /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/lib/pkgconfig/libccp4c.pc /sw/build.build/root-libccp4-dev-6.4.0-rc1-2/sw/lib/pkgconfig/ /bin/mv /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/lib/pkgconfig/libccp4f.pc /sw/build.build/root-libccp4-dev-6.4.0-rc1-2/sw/lib/pkgconfig/ /usr/bin/install -d -m 755 /sw/build.build/root-libccp4-dev-6.4.0-rc1-2/sw/share/ccp4 /bin/mv /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/ccp4/ccp4-config.cmake /sw/build.build/root-libccp4-dev-6.4.0-rc1-2/sw/share/ccp4/ /bin/rm -f /sw/build.build/root-libccp4-dev-6.4.0-rc1-2/sw/info/dir /sw/build.build/root-libccp4-dev-6.4.0-rc1-2/sw/info/dir.old /sw/build.build/root-libccp4-dev-6.4.0-rc1-2/sw/share/info/dir /sw/build.build/root-libccp4-dev-6.4.0-rc1-2/sw/share/info/dir.old /bin/rm -rf /sw/build.build/root-libccp4-lib-6.4.0-rc1-2 /bin/mkdir -p /sw/build.build/root-libccp4-lib-6.4.0-rc1-2/sw /bin/mkdir -p /sw/build.build/root-libccp4-lib-6.4.0-rc1-2/DEBIAN /usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-libccp4-lib-6.4.0-rc1-2 sudo -u fink-bld [ENV] sh -c /tmp/fink.cSdiz /usr/bin/install -d -m 755 /sw/build.build/root-libccp4-lib-6.4.0-rc1-2/sw/share/ccp4 /bin/mv /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/ccp4/atomsf.lib /sw/build.build/root-libccp4-lib-6.4.0-rc1-2/sw/share/ccp4/ /bin/mv /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/ccp4/atomsf_neutron.lib /sw/build.build/root-libccp4-lib-6.4.0-rc1-2/sw/share/ccp4/ /bin/mv /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/ccp4/syminfo.lib /sw/build.build/root-libccp4-lib-6.4.0-rc1-2/sw/share/ccp4/ /bin/mv /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/ccp4/symop.lib /sw/build.build/root-libccp4-lib-6.4.0-rc1-2/sw/share/ccp4/ /bin/mv /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/ccp4/prodrg.param /sw/build.build/root-libccp4-lib-6.4.0-rc1-2/sw/share/ccp4/ /bin/mv /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/ccp4/index.srs /sw/build.build/root-libccp4-lib-6.4.0-rc1-2/sw/share/ccp4/ /bin/mv /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/ccp4/graph.srs /sw/build.build/root-libccp4-lib-6.4.0-rc1-2/sw/share/ccp4/ /bin/mv /sw/build.build/root-libccp4-6.4.0-rc1-2/sw/share/ccp4/struct.srs /sw/build.build/root-libccp4-lib-6.4.0-rc1-2/sw/share/ccp4/ /bin/rm -f /sw/build.build/root-libccp4-lib-6.4.0-rc1-2/sw/info/dir /sw/build.build/root-libccp4-lib-6.4.0-rc1-2/sw/info/dir.old /sw/build.build/root-libccp4-lib-6.4.0-rc1-2/sw/share/info/dir /sw/build.build/root-libccp4-lib-6.4.0-rc1-2/sw/share/info/dir.old Reverting ownership of install dir to root Writing control file... Writing md5sums file... env LANG=C LC_ALL=C dpkg-deb -b root-libccp4-6.4.0-rc1-2 /sw/fink/10.9/stable/main/binary-darwin-x86_64/sci dpkg-deb: building package `libccp4' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/sci/libccp4_6.4.0-rc1-2_darwin-x86_64.deb'. Reverting ownership of install dir to root Writing control file... Creating shlibs files... Writing md5sums file... env LANG=C LC_ALL=C dpkg-deb -b root-libccp4-shlibs-6.4.0-rc1-2 /sw/fink/10.9/stable/main/binary-darwin-x86_64/sci dpkg-deb: building package `libccp4-shlibs' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/sci/libccp4-shlibs_6.4.0-rc1-2_darwin-x86_64.deb'. Reverting ownership of install dir to root Writing control file... Writing md5sums file... env LANG=C LC_ALL=C dpkg-deb -b root-libccp4-dev-6.4.0-rc1-2 /sw/fink/10.9/stable/main/binary-darwin-x86_64/sci dpkg-deb: building package `libccp4-dev' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/sci/libccp4-dev_6.4.0-rc1-2_darwin-x86_64.deb'. Reverting ownership of install dir to root Writing control file... Writing md5sums file... env LANG=C LC_ALL=C dpkg-deb -b root-libccp4-lib-6.4.0-rc1-2 /sw/fink/10.9/stable/main/binary-darwin-x86_64/sci dpkg-deb: building package `libccp4-lib' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/sci/libccp4-lib_6.4.0-rc1-2_darwin-x86_64.deb'. Removing runtime build-lock... Removing build-lock package... /sw/bin/dpkg-lockwait -r fink-buildlock-libccp4-6.4.0-rc1-2 (Reading database ... 10245 files and directories currently installed.) Removing fink-buildlock-libccp4-6.4.0-rc1-2 ...