printf ' ' | fink --no-use-binary-dist --yes --build-as-nobody rebuild meep 2>&1 The package 'meep' will be built without being installed. Reading build dependency for meep-1.2-7... Reading dependency for meep-1.2-7... Reading build conflict for meep-1.2-7... The package 'gcc48-compiler' will be installed. Reading dependency for gcc48-compiler-4.8.3-1000... Reading runtime dependency for gcc48-compiler-4.8.3-1000... The package 'libctl' will be installed. Reading dependency for libctl-3.2.1-4... Reading runtime dependency for libctl-3.2.1-4... The package 'hdf5.8' will be installed. Reading dependency for hdf5.8-1.8.13-1... Reading runtime dependency for hdf5.8-1.8.13-1... The package 'libtool2' will be installed. Reading dependency for libtool2-2.4.2-3... Reading runtime dependency for libtool2-2.4.2-3... The package 'libiconv-dev' will be installed. Reading dependency for libiconv-dev-1.14-5... Reading runtime dependency for libiconv-dev-1.14-5... The package 'gmp5' will be installed. Reading dependency for gmp5-6.0.0a-1... Reading runtime dependency for gmp5-6.0.0a-1... The package 'szip' will be installed. Reading dependency for szip-2.1-3... Reading runtime dependency for szip-2.1-3... The package 'gsl' will be installed. Reading dependency for gsl-1.16-1... Reading runtime dependency for gsl-1.16-1... The package 'fftw3' will be installed. Reading dependency for fftw3-3.3.4-2... Reading runtime dependency for fftw3-3.3.4-2... The package 'guile18' will be installed. Reading dependency for guile18-1.8.8-7... Reading runtime dependency for guile18-1.8.8-7... The package 'guile18-dev' will be installed. Reading dependency for guile18-dev-1.8.8-7... Reading runtime dependency for guile18-dev-1.8.8-7... The package 'gcc48-shlibs' will be installed. Reading dependency for gcc48-shlibs-4.8.3-1000... Reading runtime dependency for gcc48-shlibs-4.8.3-1000... The package 'harminv' will be installed. Reading dependency for harminv-1.3.1-9... Reading runtime dependency for harminv-1.3.1-9... The package 'hdf5.8-shlibs' will be installed. Reading dependency for hdf5.8-shlibs-1.8.13-1... Reading runtime dependency for hdf5.8-shlibs-1.8.13-1... The package 'libtool2-shlibs' will be installed. Reading dependency for libtool2-shlibs-2.4.2-3... Reading runtime dependency for libtool2-shlibs-2.4.2-3... The package 'gmp5-shlibs' will be installed. Reading dependency for gmp5-shlibs-6.0.0a-1... Reading runtime dependency for gmp5-shlibs-6.0.0a-1... The package 'szip-shlibs' will be installed. Reading dependency for szip-shlibs-2.1-3... Reading runtime dependency for szip-shlibs-2.1-3... The package 'gsl-shlibs' will be installed. Reading dependency for gsl-shlibs-1.16-1... Reading runtime dependency for gsl-shlibs-1.16-1... The package 'fftw3-shlibs' will be installed. Reading dependency for fftw3-shlibs-3.3.4-2... Reading runtime dependency for fftw3-shlibs-3.3.4-2... The package 'h5utils' will be installed. Reading dependency for h5utils-1.12.1-2... Reading runtime dependency for h5utils-1.12.1-2... The package 'guile18-shlibs' will be installed. Reading dependency for guile18-shlibs-1.8.8-7... Reading runtime dependency for guile18-shlibs-1.8.8-7... The package 'guile18-libs' will be installed. Reading dependency for guile18-libs-1.8.8-7... Reading runtime dependency for guile18-libs-1.8.8-7... The package 'libgmpxx5-shlibs' will be installed. Reading dependency for libgmpxx5-shlibs-6.0.0a-1... Reading runtime dependency for libgmpxx5-shlibs-6.0.0a-1... The package 'libmpfr4-shlibs' will be installed. Reading dependency for libmpfr4-shlibs-3.1.2-1... Reading runtime dependency for libmpfr4-shlibs-3.1.2-1... The package 'cloog-org2-shlibs' will be installed. Reading dependency for cloog-org2-shlibs-0.18.2-1... Reading runtime dependency for cloog-org2-shlibs-0.18.2-1... The package 'isl-shlibs' will be installed. Reading dependency for isl-shlibs-0.12.2-2... Reading runtime dependency for isl-shlibs-0.12.2-2... The package 'libmpc3-shlibs' will be installed. Reading dependency for libmpc3-shlibs-1.0.2-1... Reading runtime dependency for libmpc3-shlibs-1.0.2-1... The package 'hdf5.8-bin' will be installed. Reading dependency for hdf5.8-bin-1.8.13-1... Reading runtime dependency for hdf5.8-bin-1.8.13-1... The package 'gcc49-shlibs' will be installed. Reading dependency for gcc49-shlibs-4.9.1-1000... Reading runtime dependency for gcc49-shlibs-4.9.1-1000... The package 'libpng16-shlibs' will be installed. Reading dependency for libpng16-shlibs-1.6.12-1... Reading runtime dependency for libpng16-shlibs-1.6.12-1... The package 'libmatheval' will be installed. Reading dependency for libmatheval-1.1.11-1... Reading runtime dependency for libmatheval-1.1.11-1... The package 'readline6-shlibs' will be installed. Reading dependency for readline6-shlibs-6.3.6-1... Reading runtime dependency for readline6-shlibs-6.3.6-1... The package 'libmatheval-shlibs' will be installed. Reading dependency for libmatheval-shlibs-1.1.11-1... Reading runtime dependency for libmatheval-shlibs-1.1.11-1... The following package will be rebuilt: meep The following 33 additional packages will be installed: cloog-org2-shlibs fftw3 fftw3-shlibs gcc48-compiler gcc48-shlibs gcc49-shlibs gmp5 gmp5-shlibs gsl gsl-shlibs guile18 guile18-dev guile18-libs guile18-shlibs h5utils harminv hdf5.8 hdf5.8-bin hdf5.8-shlibs isl-shlibs libctl libgmpxx5-shlibs libiconv-dev libmatheval libmatheval-shlibs libmpc3-shlibs libmpfr4-shlibs libpng16-shlibs libtool2 libtool2-shlibs readline6-shlibs szip szip-shlibs Do you want to continue? [Y/n] (assuming default) curl --connect-timeout 30 -f -L -A 'fink/0.37.0' -O http://distfiles.master.finkmirrors.net/distfiles/meep-1.2.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 5 788k 5 44646 0 0 105k 0 0:00:07 --:--:-- 0:00:07 105k 89 788k 89 702k 0 0 523k 0 0:00:01 0:00:01 --:--:-- 522k 100 788k 100 788k 0 0 547k 0 0:00:01 0:00:01 --:--:-- 547k Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/gcc49-shlibs_4.9.1-1000_darwin-x86_64.deb Selecting previously deselected package gcc49-shlibs. (Reading database ... 4296 files and directories currently installed.) Unpacking gcc49-shlibs (from .../gcc49-shlibs_4.9.1-1000_darwin-x86_64.deb) ... Setting up gcc49-shlibs (4.9.1-1000) ... Clearing dependency_libs of .la files being installed Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/gmp5_6.0.0a-1_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/gmp5-shlibs_6.0.0a-1_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libgmpxx5-shlibs_6.0.0a-1_darwin-x86_64.deb Selecting previously deselected package gmp5. (Reading database ... 4341 files and directories currently installed.) Unpacking gmp5 (from .../gmp5_6.0.0a-1_darwin-x86_64.deb) ... Selecting previously deselected package gmp5-shlibs. Unpacking gmp5-shlibs (from .../gmp5-shlibs_6.0.0a-1_darwin-x86_64.deb) ... Selecting previously deselected package libgmpxx5-shlibs. Unpacking libgmpxx5-shlibs (from .../libgmpxx5-shlibs_6.0.0a-1_darwin-x86_64.deb) ... Setting up gmp5-shlibs (6.0.0a-1) ... Setting up libgmpxx5-shlibs (6.0.0a-1) ... Setting up gmp5 (6.0.0a-1) ... Clearing dependency_libs of .la files being installed * gmp: (gmp). GNU Multiple Precision Arithmetic Library. install-info(/sw/share/info/gmp.info): creating new section `GNU libraries' Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/gsl_1.16-1_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/gsl-shlibs_1.16-1_darwin-x86_64.deb Selecting previously deselected package gsl. (Reading database ... 4391 files and directories currently installed.) Unpacking gsl (from .../gsl_1.16-1_darwin-x86_64.deb) ... Selecting previously deselected package gsl-shlibs. Unpacking gsl-shlibs (from .../gsl-shlibs_1.16-1_darwin-x86_64.deb) ... Setting up gsl-shlibs (1.16-1) ... Setting up gsl (1.16-1) ... Clearing dependency_libs of .la files being installed * gsl-ref: (gsl-ref). GNU Scientific Library - Reference install-info(/sw/share/info/gsl-ref.info): creating new section `Software libraries' Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/devel/isl-shlibs_0.12.2-2_darwin-x86_64.deb Selecting previously deselected package isl-shlibs. (Reading database ... 4641 files and directories currently installed.) Unpacking isl-shlibs (from .../isl-shlibs_0.12.2-2_darwin-x86_64.deb) ... Setting up isl-shlibs (0.12.2-2) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/base/libiconv-dev_1.14-5_darwin-x86_64.deb Selecting previously deselected package libiconv-dev. (Reading database ... 4642 files and directories currently installed.) Unpacking libiconv-dev (from .../libiconv-dev_1.14-5_darwin-x86_64.deb) ... Setting up libiconv-dev (1.14-5) ... Clearing dependency_libs of .la files being installed Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/libmatheval_1.1.11-1_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/libmatheval-shlibs_1.1.11-1_darwin-x86_64.deb Selecting previously deselected package libmatheval. (Reading database ... 4660 files and directories currently installed.) Unpacking libmatheval (from .../libmatheval_1.1.11-1_darwin-x86_64.deb) ... Selecting previously deselected package libmatheval-shlibs. Unpacking libmatheval-shlibs (from .../libmatheval-shlibs_1.1.11-1_darwin-x86_64.deb) ... Setting up libmatheval-shlibs (1.1.11-1) ... Setting up libmatheval (1.1.11-1) ... Clearing dependency_libs of .la files being installed * libmatheval: (libmatheval). Library for evaluating symbolic expressions Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libmpfr4-shlibs_3.1.2-1_darwin-x86_64.deb Selecting previously deselected package libmpfr4-shlibs. (Reading database ... 4680 files and directories currently installed.) Unpacking libmpfr4-shlibs (from .../libmpfr4-shlibs_3.1.2-1_darwin-x86_64.deb) ... Setting up libmpfr4-shlibs (3.1.2-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/libpng16-shlibs_1.6.12-1_darwin-x86_64.deb Selecting previously deselected package libpng16-shlibs. (Reading database ... 4693 files and directories currently installed.) Unpacking libpng16-shlibs (from .../libpng16-shlibs_1.6.12-1_darwin-x86_64.deb) ... Setting up libpng16-shlibs (1.6.12-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/libtool2_2.4.2-3_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/devel/libtool2-shlibs_2.4.2-3_darwin-x86_64.deb Selecting previously deselected package libtool2. (Reading database ... 4701 files and directories currently installed.) Unpacking libtool2 (from .../libtool2_2.4.2-3_darwin-x86_64.deb) ... Selecting previously deselected package libtool2-shlibs. Unpacking libtool2-shlibs (from .../libtool2-shlibs_2.4.2-3_darwin-x86_64.deb) ... Setting up libtool2-shlibs (2.4.2-3) ... Setting up libtool2 (2.4.2-3) ... Clearing dependency_libs of .la files being installed * Libtool: (libtool). Generic shared library support script. install-info(/sw/share/info/libtool.info): creating new section `GNU programming tools' Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/readline6-shlibs_6.3.6-1_darwin-x86_64.deb Selecting previously deselected package readline6-shlibs. (Reading database ... 4789 files and directories currently installed.) Unpacking readline6-shlibs (from .../readline6-shlibs_6.3.6-1_darwin-x86_64.deb) ... Setting up readline6-shlibs (6.3.6-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/szip_2.1-3_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/szip-shlibs_2.1-3_darwin-x86_64.deb Selecting previously deselected package szip. (Reading database ... 4800 files and directories currently installed.) Unpacking szip (from .../szip_2.1-3_darwin-x86_64.deb) ... Selecting previously deselected package szip-shlibs. Unpacking szip-shlibs (from .../szip-shlibs_2.1-3_darwin-x86_64.deb) ... Setting up szip-shlibs (2.1-3) ... Setting up szip (2.1-3) ... Clearing dependency_libs of .la files being installed Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/devel/cloog-org2-shlibs_0.18.2-1_darwin-x86_64.deb Selecting previously deselected package cloog-org2-shlibs. (Reading database ... 4816 files and directories currently installed.) Unpacking cloog-org2-shlibs (from .../cloog-org2-shlibs_0.18.2-1_darwin-x86_64.deb) ... Setting up cloog-org2-shlibs (0.18.2-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/fftw3_3.3.4-2_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/fftw3-shlibs_3.3.4-2_darwin-x86_64.deb Selecting previously deselected package fftw3. (Reading database ... 4817 files and directories currently installed.) Unpacking fftw3 (from .../fftw3_3.3.4-2_darwin-x86_64.deb) ... Selecting previously deselected package fftw3-shlibs. Unpacking fftw3-shlibs (from .../fftw3-shlibs_3.3.4-2_darwin-x86_64.deb) ... Setting up fftw3-shlibs (3.3.4-2) ... Setting up fftw3 (3.3.4-2) ... Clearing dependency_libs of .la files being installed * fftw3: (fftw3). FFTW User's Manual. install-info(/sw/share/info/fftw3.info): creating new section `Development' Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/guile18_1.8.8-7_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/guile18-shlibs_1.8.8-7_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/guile18-libs_1.8.8-7_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/guile18-dev_1.8.8-7_darwin-x86_64.deb Selecting previously deselected package guile18. (Reading database ... 5001 files and directories currently installed.) Unpacking guile18 (from .../guile18_1.8.8-7_darwin-x86_64.deb) ... Selecting previously deselected package guile18-shlibs. Unpacking guile18-shlibs (from .../guile18-shlibs_1.8.8-7_darwin-x86_64.deb) ... Selecting previously deselected package guile18-libs. Unpacking guile18-libs (from .../guile18-libs_1.8.8-7_darwin-x86_64.deb) ... Selecting previously deselected package guile18-dev. Unpacking guile18-dev (from .../guile18-dev_1.8.8-7_darwin-x86_64.deb) ... Setting up guile18-shlibs (1.8.8-7) ... Setting up guile18-libs (1.8.8-7) ... Clearing dependency_libs of .la files being installed Setting up guile18-dev (1.8.8-7) ... Clearing dependency_libs of .la files being installed Setting up guile18 (1.8.8-7) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/hdf5.8_1.8.13-1_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/hdf5.8-shlibs_1.8.13-1_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/hdf5.8-bin_1.8.13-1_darwin-x86_64.deb Selecting previously deselected package hdf5.8. (Reading database ... 5334 files and directories currently installed.) Unpacking hdf5.8 (from .../hdf5.8_1.8.13-1_darwin-x86_64.deb) ... Selecting previously deselected package hdf5.8-shlibs. Unpacking hdf5.8-shlibs (from .../hdf5.8-shlibs_1.8.13-1_darwin-x86_64.deb) ... Selecting previously deselected package hdf5.8-bin. Unpacking hdf5.8-bin (from .../hdf5.8-bin_1.8.13-1_darwin-x86_64.deb) ... Setting up hdf5.8-shlibs (1.8.13-1) ... Setting up hdf5.8-bin (1.8.13-1) ... Setting up hdf5.8 (1.8.13-1) ... Clearing dependency_libs of .la files being installed Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libmpc3-shlibs_1.0.2-1_darwin-x86_64.deb Selecting previously deselected package libmpc3-shlibs. (Reading database ... 5533 files and directories currently installed.) Unpacking libmpc3-shlibs (from .../libmpc3-shlibs_1.0.2-1_darwin-x86_64.deb) ... Setting up libmpc3-shlibs (1.0.2-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/gcc48-compiler_4.8.3-1000_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/gcc48-shlibs_4.8.3-1000_darwin-x86_64.deb Selecting previously deselected package gcc48-compiler. (Reading database ... 5536 files and directories currently installed.) Unpacking gcc48-compiler (from .../gcc48-compiler_4.8.3-1000_darwin-x86_64.deb) ... Selecting previously deselected package gcc48-shlibs. Unpacking gcc48-shlibs (from .../gcc48-shlibs_4.8.3-1000_darwin-x86_64.deb) ... Setting up gcc48-shlibs (4.8.3-1000) ... Clearing dependency_libs of .la files being installed Setting up gcc48-compiler (4.8.3-1000) ... Clearing dependency_libs of .la files being installed Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/h5utils_1.12.1-2_darwin-x86_64.deb Selecting previously deselected package h5utils. (Reading database ... 10956 files and directories currently installed.) Unpacking h5utils (from .../h5utils_1.12.1-2_darwin-x86_64.deb) ... Setting up h5utils (1.12.1-2) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/harminv_1.3.1-9_darwin-x86_64.deb Selecting previously deselected package harminv. (Reading database ... 10996 files and directories currently installed.) Unpacking harminv (from .../harminv_1.3.1-9_darwin-x86_64.deb) ... Setting up harminv (1.3.1-9) ... Clearing dependency_libs of .la files being installed Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/libctl_3.2.1-4_darwin-x86_64.deb Selecting previously deselected package libctl. (Reading database ... 11008 files and directories currently installed.) Unpacking libctl (from .../libctl_3.2.1-4_darwin-x86_64.deb) ... Setting up libctl (3.2.1-4) ... Clearing dependency_libs of .la files being installed Setting runtime build-lock... dpkg-deb -b /sw/build.build/root-fink-buildlock-meep-1.2-7 /sw/build.build dpkg-deb: building package `fink-buildlock-meep-1.2-7' in `/sw/build.build/fink-buildlock-meep-1.2-7_2014.07.31-08.22.10_darwin-x86_64.deb'. Installing build-lock package... /sw/bin/dpkg-lockwait -i /sw/build.build/fink-buildlock-meep-1.2-7_2014.07.31-08.22.10_darwin-x86_64.deb Selecting previously deselected package fink-buildlock-meep-1.2-7. (Reading database ... 11073 files and directories currently installed.) Unpacking fink-buildlock-meep-1.2-7 (from .../fink-buildlock-meep-1.2-7_2014.07.31-08.22.10_darwin-x86_64.deb) ... Setting up fink-buildlock-meep-1.2-7 (2014.07.31-08.22.10) ... sudo -u fink-bld [ENV] sh -c /tmp/fink.IYMkR env LANG=C LC_ALL=C /sw/bin/tar --no-same-owner --no-same-permissions -xvf /sw/src/meep-1.2.tar.gz meep-1.2/ meep-1.2/tests/ meep-1.2/tests/flux.cpp meep-1.2/tests/Makefile.am meep-1.2/tests/stress_tensor.cpp meep-1.2/tests/two_dimensional.cpp meep-1.2/tests/h5test.cpp meep-1.2/tests/physical.cpp meep-1.2/tests/bragg_transmission.cpp meep-1.2/tests/known_results.cpp meep-1.2/tests/pml.cpp meep-1.2/tests/bench.cpp meep-1.2/tests/one_dimensional.cpp meep-1.2/tests/aniso_disp.cpp meep-1.2/tests/Makefile.in meep-1.2/tests/convergence_cyl_waveguide.cpp meep-1.2/tests/harmonics.cpp meep-1.2/tests/symmetry.cpp meep-1.2/tests/integrate.cpp meep-1.2/tests/cylindrical.cpp meep-1.2/tests/2D_convergence.cpp meep-1.2/tests/three_d.cpp meep-1.2/Makefile.am meep-1.2/ltmain.sh meep-1.2/INSTALL meep-1.2/missing meep-1.2/aclocal.m4 meep-1.2/src/ meep-1.2/src/dft.cpp meep-1.2/src/dft_ldos.cpp meep-1.2/src/Makefile.am meep-1.2/src/update_eh.cpp meep-1.2/src/meep/ meep-1.2/src/meep/vec.hpp meep-1.2/src/meep/mympi.hpp meep-1.2/src/sphere-quad.h meep-1.2/src/h5fields.cpp meep-1.2/src/integrate2.cpp meep-1.2/src/h5file.cpp meep-1.2/src/time.cpp meep-1.2/src/susceptibility.cpp meep-1.2/src/multilevel-atom.cpp meep-1.2/src/random.cpp meep-1.2/src/casimir.cpp meep-1.2/src/boundaries.cpp meep-1.2/src/step_db.cpp meep-1.2/src/control_c.cpp meep-1.2/src/cw_fields.cpp meep-1.2/src/bicgstab.cpp meep-1.2/src/mympi.cpp meep-1.2/src/output_directory.cpp meep-1.2/src/bicgstab.hpp meep-1.2/src/fields.cpp meep-1.2/src/meep.hpp meep-1.2/src/step.cpp meep-1.2/src/loop_in_chunks.cpp meep-1.2/src/Makefile.in meep-1.2/src/mpb.cpp meep-1.2/src/integrate.cpp meep-1.2/src/sources.cpp meep-1.2/src/sphere-quad.cpp meep-1.2/src/stress.cpp meep-1.2/src/meep_internals.hpp meep-1.2/src/step_generic.cpp meep-1.2/src/step_generic_stride1.cpp meep-1.2/src/structure.cpp meep-1.2/src/energy_and_flux.cpp meep-1.2/src/vec.cpp meep-1.2/src/initialize.cpp meep-1.2/src/grace.cpp meep-1.2/src/update_pols.cpp meep-1.2/src/bands.cpp meep-1.2/src/monitor.cpp meep-1.2/src/anisotropic_averaging.cpp meep-1.2/depcomp meep-1.2/TODO meep-1.2/ChangeLog meep-1.2/NEWS meep-1.2/README meep-1.2/COPYING meep-1.2/configure meep-1.2/meep-pkgconfig.in meep-1.2/install-sh meep-1.2/COPYRIGHT meep-1.2/Makefile.in meep-1.2/AUTHORS meep-1.2/libctl/ meep-1.2/libctl/Makefile.am meep-1.2/libctl/casimir.scm meep-1.2/libctl/meep-enums.scm meep-1.2/libctl/meep_op_renames.i meep-1.2/libctl/meep-ctl-swig.hpp meep-1.2/libctl/meep_wrap.cxx meep-1.2/libctl/meep.scm.in meep-1.2/libctl/meep.i meep-1.2/libctl/meep_swig_bug_workaround.i meep-1.2/libctl/meep_wrap.patch meep-1.2/libctl/Makefile.in meep-1.2/libctl/meep_enum_renames.i meep-1.2/libctl/meep-ctl-const.hpp meep-1.2/libctl/meep.cpp meep-1.2/libctl/meep-ctl.hpp meep-1.2/libctl/structure.cpp meep-1.2/libctl/meep_renames.i meep-1.2/configure.ac meep-1.2/test-driver meep-1.2/m4/ meep-1.2/m4/ax_check_compiler_flags.m4 meep-1.2/m4/pkg.m4 meep-1.2/m4/lt~obsolete.m4 meep-1.2/m4/acx_mpi.m4 meep-1.2/m4/ltsugar.m4 meep-1.2/m4/acx_blas.m4 meep-1.2/m4/acx_lapack.m4 meep-1.2/m4/libtool.m4 meep-1.2/m4/ax_gcc_x86_cpuid.m4 meep-1.2/m4/ax_cxx_maxopt.m4 meep-1.2/m4/ax_gcc_archflag.m4 meep-1.2/m4/ltoptions.m4 meep-1.2/m4/ax_compiler_vendor.m4 meep-1.2/m4/ltversion.m4 meep-1.2/config.sub meep-1.2/examples/ meep-1.2/examples/Makefile.am meep-1.2/examples/ring.ctl meep-1.2/examples/holey-wvg-cavity.ctl meep-1.2/examples/holey-wvg-bands.ctl meep-1.2/examples/3rd-harm-1d.ctl meep-1.2/examples/bend-flux.ctl meep-1.2/examples/Makefile.in meep-1.2/examples/ring-cyl.ctl meep-1.2/examples/material-dispersion.ctl meep-1.2/config.guess meep-1.2/config.h.in sudo -u fink-bld [ENV] sh -c /tmp/fink.6fHoS /tmp/fink.NHG6g #!/bin/sh -ev export PATH=/sw/share/guile/1.8/scripts/binoverride:$PATH ./configure --prefix=/sw --mandir=/sw/share/man -with-blas="-Wl,-framework,Accelerate" -with-lapack="-Wl,-framework,Accelerate" --disable-dependency-tracking --with-libctl=/sw/share/libctl F77=gfortran-fsf-4.8 CC=gcc-fsf-4.8 CXX=g++-fsf-4.8 --without-gcc-arch checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... ./install-sh -c -d checking for gawk... no checking for mawk... no checking for nawk... no checking for awk... awk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking whether to enable maintainer-specific portions of Makefiles... no checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++-fsf-4.8 accepts -g... yes checking for style of include used by make... GNU checking dependency style of g++-fsf-4.8... none checking build system type... x86_64-apple-darwin13.3.0 checking host system type... x86_64-apple-darwin13.3.0 checking for gcc... gcc-fsf-4.8 checking whether we are using the GNU C compiler... yes checking whether gcc-fsf-4.8 accepts -g... yes checking for gcc-fsf-4.8 option to accept ISO C89... none needed checking dependency style of gcc-fsf-4.8... none checking for C++ compiler vendor... gnu checking whether C++ compiler accepts -malign-double... yes checking whether C++ compiler accepts -fstrict-aliasing... yes checking whether C++ compiler accepts -ffast-math... yes checking for gcc architecture flag... checking for gcc architecture flag... unknown checking whether C++ compiler accepts -O3 -malign-double -fstrict-aliasing... yes checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc-fsf-4.8... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... no checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm checking the name lister (/usr/bin/nm) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 196608 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-apple-darwin13.3.0 file names to x86_64-apple-darwin13.3.0 format... func_convert_file_noop checking how to convert x86_64-apple-darwin13.3.0 file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... no checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... no checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm output from gcc-fsf-4.8 object... ok checking for sysroot... no checking for mt... no checking if : is a manifest tool... no checking for dsymutil... dsymutil checking for nmedit... nmedit checking for lipo... lipo checking for otool... otool checking for otool64... no checking for -single_module linker flag... yes checking for -exported_symbols_list linker flag... yes checking for -force_load linker flag... yes checking how to run the C preprocessor... gcc-fsf-4.8 -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc-fsf-4.8 supports -fno-rtti -fno-exceptions... no checking for gcc-fsf-4.8 option to produce PIC... -fno-common -DPIC checking if gcc-fsf-4.8 PIC flag -fno-common -DPIC works... yes checking if gcc-fsf-4.8 static flag -static works... no checking if gcc-fsf-4.8 supports -c -o file.o... yes checking if gcc-fsf-4.8 supports -c -o file.o... (cached) yes checking whether the gcc-fsf-4.8 linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin13.3.0 dyld checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++-fsf-4.8 -E checking for ld used by g++-fsf-4.8... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... no checking whether the g++-fsf-4.8 linker (/usr/bin/ld) supports shared libraries... yes checking for g++-fsf-4.8 option to produce PIC... -fno-common -DPIC checking if g++-fsf-4.8 PIC flag -fno-common -DPIC works... yes checking if g++-fsf-4.8 static flag -static works... no checking if g++-fsf-4.8 supports -c -o file.o... yes checking if g++-fsf-4.8 supports -c -o file.o... (cached) yes checking whether the g++-fsf-4.8 linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin13.3.0 dyld checking how to hardcode library paths into programs... immediate checking for latex2html... no configure: WARNING: Cannot find latex2html in your path! checking for sin in -lm... yes checking for fftw_plan_dft_1d in -lfftw3... yes checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran-fsf-4.8 accepts -g... yes checking whether we are using the GNU Fortran 77 compiler... (cached) yes checking whether gfortran-fsf-4.8 accepts -g... (cached) yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for gfortran-fsf-4.8 option to produce PIC... -fno-common checking if gfortran-fsf-4.8 PIC flag -fno-common works... yes checking if gfortran-fsf-4.8 static flag -static works... no checking if gfortran-fsf-4.8 supports -c -o file.o... yes checking if gfortran-fsf-4.8 supports -c -o file.o... (cached) yes checking whether the gfortran-fsf-4.8 linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin13.3.0 dyld checking how to hardcode library paths into programs... immediate checking how to get verbose linking output from gfortran-fsf-4.8... -v checking for Fortran 77 libraries of gfortran-fsf-4.8... -L/sw/lib -L/sw/lib/gcc4.8/lib/gcc/x86_64-apple-darwin13.3.0/4.8.3 -L/sw/lib/gcc4.8/lib/gcc/x86_64-apple-darwin13.3.0/4.8.3/../../.. -lfftw3 -lgfortran -lquadmath -lm checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking for sgemm_ in -Wl,-framework,Accelerate... yes checking for cheev_ in -Wl,-framework,Accelerate... yes checking for pkg-config... no *** The pkg-config script could not be found. Make sure it is *** in your path, or set the PKG_CONFIG environment variable *** to the full path to pkg-config. *** Or see http://www.freedesktop.org/software/pkgconfig to get pkg-config. checking for harminv_get_freq_error in -lharminv... yes checking mpb.h usability... no checking mpb.h presence... no checking for mpb.h... no checking for cblas_cgemm... yes checking for gsl_sf_bessel_Jn in -lgsl... yes checking for deflate in -lz... yes checking for H5Pcreate in -lhdf5... yes checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking for guile-config... guile-config checking if linking to guile works... yes checking libguile.h usability... yes checking libguile.h presence... yes checking for libguile.h... yes checking guile/gh.h usability... yes checking guile/gh.h presence... yes checking for guile/gh.h... yes checking for scm_make_smob_type... yes checking for SCM_SMOB_PREDICATE... no checking for SCM_SMOB_DATA... no checking for SCM_NEWSMOB... no checking how to activate readline in Guile... ice-9 readline checking for libctl dir... /sw/share/libctl checking for gen-ctl-io... gen-ctl-io checking for ctl_get_vector3 in -lctl... yes checking ctl.h usability... yes checking ctl.h presence... yes checking for ctl.h... yes checking whether libctl version is at least 3.2.0... ok checking for libctl_quiet feature... yes checking for basename in -lgen... no checking for feenableexcept... no checking whether feenableexcept declaration is usable... no checking whether to catch and ignore SIGFPE signals... no checking whether time.h and sys/time.h may both be included... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for BSDgettimeofday... no checking for gettimeofday... yes checking for cblas_ddot... yes checking for cblas_daxpy... yes checking for C/C++ restrict keyword... __restrict checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating meep-pkgconfig config.status: creating src/Makefile config.status: creating tests/Makefile config.status: creating examples/Makefile config.status: creating libctl/Makefile config.status: creating libctl/meep.scm config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands make /Applications/Xcode.app/Contents/Developer/usr/bin/make all-recursive Making all in src /Applications/Xcode.app/Contents/Developer/usr/bin/make all-am CXX bands.lo CXX anisotropic_averaging.lo CXX boundaries.lo CXX bicgstab.lo CXX casimir.lo CXX control_c.lo CXX cw_fields.lo CXX dft.lo CXX dft_ldos.lo CXX energy_and_flux.lo CXX fields.lo CXX loop_in_chunks.lo CXX grace.lo CXX h5fields.lo CXX h5file.lo CXX initialize.lo CXX integrate.lo CXX integrate2.lo CXX monitor.lo CXX mympi.lo CXX multilevel-atom.lo CXX output_directory.lo CXX random.lo CXX sources.lo CXX step.lo CXX step_db.lo CXX stress.lo CXX structure.lo CXX susceptibility.lo CXX time.lo CXX update_eh.lo CXX mpb.lo CXX update_pols.lo CXX vec.lo CXX step_generic.lo CXX step_generic_stride1.lo CXX sphere-quad.o CXXLD sphere_quad CXXLD libmeep.la Making all in libctl gen-ctl-io --cxx --header -o ctl-io.h meep.scm /sw/share/libctl gen-ctl-io --cxx --swig -o ctl-io.i meep.scm /sw/share/libctl cp -f /sw/share/libctl/base/main.c main.cpp cp -f /sw/share/libctl/utils/geom.c geom.cpp gen-ctl-io --cxx --code -o ctl-io.cpp meep.scm /sw/share/libctl /Applications/Xcode.app/Contents/Developer/usr/bin/make all-am CXX meep.o CXX meep_wrap.o CXX structure.o CXX main.o CXX geom.o CXX ctl-io.o In file included from ctl-io.h:7:0, from meep-ctl.hpp:10, from meep_wrap.cxx:1372: /sw/include/ctl.h:106:0: warning: "gh_symbol2scm" redefined [enabled by default] # define gh_symbol2scm scm_from_locale_symbol ^ meep_wrap.cxx:1244:0: note: this is the location of the previous definition #define gh_symbol2scm scm_str2symbol ^ ctl-io.cpp: In function 'void ctlio::force_region_input(SCM, ctlio::force_region*)': ctl-io.cpp:31:49: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->center = vector3_object_property(so, "center"); ^ ctl-io.cpp:32:45: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->size = vector3_object_property(so, "size"); ^ ctl-io.cpp:33:55: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->direction = integer_object_property(so, "direction"); ^ ctl-io.cpp:34:49: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->weight = cnumber_object_property(so, "weight"); ^ ctl-io.cpp: In function 'void ctlio::flux_region_input(SCM, ctlio::flux_region*)': ctl-io.cpp:39:49: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->center = vector3_object_property(so, "center"); ^ ctl-io.cpp:40:45: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->size = vector3_object_property(so, "size"); ^ ctl-io.cpp:41:55: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->direction = integer_object_property(so, "direction"); ^ ctl-io.cpp:42:49: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->weight = cnumber_object_property(so, "weight"); ^ ctl-io.cpp: In function 'void ctlio::eigenmode_source_input(SCM, ctlio::eigenmode_source*)': ctl-io.cpp:47:69: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->eig_lattice_size = vector3_object_property(so, "eig-lattice-size"); ^ ctl-io.cpp:48:73: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->eig_lattice_center = vector3_object_property(so, "eig-lattice-center"); ^ ctl-io.cpp:49:55: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->component = integer_object_property(so, "component"); ^ ctl-io.cpp:50:55: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->direction = integer_object_property(so, "direction"); ^ ctl-io.cpp:51:53: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->eig_band = integer_object_property(so, "eig-band"); ^ ctl-io.cpp:52:57: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->eig_kpoint = vector3_object_property(so, "eig-kpoint"); ^ ctl-io.cpp:53:67: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->eig_match_freqp = boolean_object_property(so, "eig-match-freq?"); ^ ctl-io.cpp:54:57: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->eig_parity = integer_object_property(so, "eig-parity"); ^ ctl-io.cpp:55:65: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->eig_resolution = integer_object_property(so, "eig-resolution"); ^ ctl-io.cpp:56:62: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->eig_tolerance = number_object_property(so, "eig-tolerance"); ^ ctl-io.cpp: In function 'void ctlio::source_input(SCM, ctlio::source*)': ctl-io.cpp:61:48: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] src_time_input(object_object_property(so, "src"), &o->src); ^ ctl-io.cpp:62:55: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->component = integer_object_property(so, "component"); ^ ctl-io.cpp:63:49: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->center = vector3_object_property(so, "center"); ^ ctl-io.cpp:64:45: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->size = vector3_object_property(so, "size"); ^ ctl-io.cpp:65:55: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->amplitude = cnumber_object_property(so, "amplitude"); ^ ctl-io.cpp:66:49: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->amp_func = SCM_object_property(so, "amp-func"); ^ ctl-io.cpp:67:44: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] if (object_is_member("eigenmode-source", so)) { ^ ctl-io.cpp: In function 'void ctlio::custom_src_input(SCM, ctlio::custom_src*)': ctl-io.cpp:78:54: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->src_func = function_object_property(so, "src-func"); ^ ctl-io.cpp:79:56: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->start_time = number_object_property(so, "start-time"); ^ ctl-io.cpp:80:52: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->end_time = number_object_property(so, "end-time"); ^ ctl-io.cpp:81:47: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->swigval = SCM_object_property(so, "swigval"); ^ ctl-io.cpp: In function 'void ctlio::gaussian_src_input(SCM, ctlio::gaussian_src*)': ctl-io.cpp:86:54: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->frequency = number_object_property(so, "frequency"); ^ ctl-io.cpp:87:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->width = number_object_property(so, "width"); ^ ctl-io.cpp:88:56: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->start_time = number_object_property(so, "start-time"); ^ ctl-io.cpp:89:48: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->cutoff = number_object_property(so, "cutoff"); ^ ctl-io.cpp:90:47: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->swigval = SCM_object_property(so, "swigval"); ^ ctl-io.cpp: In function 'void ctlio::continuous_src_input(SCM, ctlio::continuous_src*)': ctl-io.cpp:95:54: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->frequency = number_object_property(so, "frequency"); ^ ctl-io.cpp:96:56: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->start_time = number_object_property(so, "start-time"); ^ ctl-io.cpp:97:52: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->end_time = number_object_property(so, "end-time"); ^ ctl-io.cpp:98:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->width = number_object_property(so, "width"); ^ ctl-io.cpp:99:48: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->cutoff = number_object_property(so, "cutoff"); ^ ctl-io.cpp:100:47: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->swigval = SCM_object_property(so, "swigval"); ^ ctl-io.cpp: In function 'void ctlio::src_time_input(SCM, ctlio::src_time*)': ctl-io.cpp:105:65: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->is_integratedp = boolean_object_property(so, "is-integrated?"); ^ ctl-io.cpp:106:38: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] if (object_is_member("custom-src", so)) { ^ ctl-io.cpp:111:45: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] else if (object_is_member("gaussian-src", so)) { ^ ctl-io.cpp:116:47: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] else if (object_is_member("continuous-src", so)) { ^ ctl-io.cpp: In function 'void ctlio::volume_class_input(SCM, ctlio::volume_class*)': ctl-io.cpp:127:49: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->center = vector3_object_property(so, "center"); ^ ctl-io.cpp:128:45: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->size = vector3_object_property(so, "size"); ^ ctl-io.cpp: In function 'void ctlio::pml_input(SCM, ctlio::pml*)': ctl-io.cpp:133:54: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->thickness = number_object_property(so, "thickness"); ^ ctl-io.cpp:134:55: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->direction = integer_object_property(so, "direction"); ^ ctl-io.cpp:135:45: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->side = integer_object_property(so, "side"); ^ ctl-io.cpp:136:52: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->strength = number_object_property(so, "strength"); ^ ctl-io.cpp:137:60: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->R_asymptotic = number_object_property(so, "R-asymptotic"); ^ ctl-io.cpp:138:60: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->mean_stretch = number_object_property(so, "mean-stretch"); ^ ctl-io.cpp:139:60: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->pml_profile = function_object_property(so, "pml-profile"); ^ ctl-io.cpp: In function 'void ctlio::symmetry_input(SCM, ctlio::symmetry*)': ctl-io.cpp:156:55: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->direction = integer_object_property(so, "direction"); ^ ctl-io.cpp:157:47: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->phase = cnumber_object_property(so, "phase"); ^ ctl-io.cpp:158:38: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] if (object_is_member("mirror-sym", so)) { ^ ctl-io.cpp:163:44: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] else if (object_is_member("rotate4-sym", so)) { ^ ctl-io.cpp:168:44: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] else if (object_is_member("rotate2-sym", so)) { ^ ctl-io.cpp: In function 'void ctlio::lattice_input(SCM, ctlio::lattice*)': ctl-io.cpp:179:49: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->basis1 = vector3_object_property(so, "basis1"); ^ ctl-io.cpp:180:49: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->basis2 = vector3_object_property(so, "basis2"); ^ ctl-io.cpp:181:49: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->basis3 = vector3_object_property(so, "basis3"); ^ ctl-io.cpp:182:45: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->size = vector3_object_property(so, "size"); ^ ctl-io.cpp:183:57: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->basis_size = vector3_object_property(so, "basis-size"); ^ ctl-io.cpp:184:41: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->b1 = vector3_object_property(so, "b1"); ^ ctl-io.cpp:185:41: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->b2 = vector3_object_property(so, "b2"); ^ ctl-io.cpp:186:41: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->b3 = vector3_object_property(so, "b3"); ^ ctl-io.cpp:187:49: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->basis = matrix3x3_object_property(so, "basis"); ^ ctl-io.cpp:188:51: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->metric = matrix3x3_object_property(so, "metric"); ^ ctl-io.cpp: In function 'void ctlio::ellipsoid_input(SCM, ctlio::ellipsoid*)': ctl-io.cpp:193:71: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->inverse_semi_axes = vector3_object_property(so, "inverse-semi-axes"); ^ ctl-io.cpp: In function 'void ctlio::block_input(SCM, ctlio::block*)': ctl-io.cpp:198:41: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->e1 = vector3_object_property(so, "e1"); ^ ctl-io.cpp:199:41: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->e2 = vector3_object_property(so, "e2"); ^ ctl-io.cpp:200:41: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->e3 = vector3_object_property(so, "e3"); ^ ctl-io.cpp:201:45: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->size = vector3_object_property(so, "size"); ^ ctl-io.cpp:202:73: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->projection_matrix = matrix3x3_object_property(so, "projection-matrix"); ^ ctl-io.cpp:203:37: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] if (object_is_member("ellipsoid", so)) { ^ ctl-io.cpp: In function 'void ctlio::sphere_input(SCM, ctlio::sphere*)': ctl-io.cpp:214:48: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->radius = number_object_property(so, "radius"); ^ ctl-io.cpp: In function 'void ctlio::wedge_input(SCM, ctlio::wedge*)': ctl-io.cpp:219:58: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->wedge_angle = number_object_property(so, "wedge-angle"); ^ ctl-io.cpp:220:59: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->wedge_start = vector3_object_property(so, "wedge-start"); ^ ctl-io.cpp:221:41: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->e1 = vector3_object_property(so, "e1"); ^ ctl-io.cpp:222:41: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->e2 = vector3_object_property(so, "e2"); ^ ctl-io.cpp: In function 'void ctlio::cone_input(SCM, ctlio::cone*)': ctl-io.cpp:227:50: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->radius2 = number_object_property(so, "radius2"); ^ ctl-io.cpp: In function 'void ctlio::cylinder_input(SCM, ctlio::cylinder*)': ctl-io.cpp:232:45: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->axis = vector3_object_property(so, "axis"); ^ ctl-io.cpp:233:48: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->radius = number_object_property(so, "radius"); ^ ctl-io.cpp:234:48: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->height = number_object_property(so, "height"); ^ ctl-io.cpp:235:33: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] if (object_is_member("wedge", so)) { ^ ctl-io.cpp:240:37: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] else if (object_is_member("cone", so)) { ^ ctl-io.cpp: In function 'void ctlio::compound_geometric_object_input(SCM, ctlio::compound_geometric_object*)': ctl-io.cpp:252:57: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] list lo_t = list_object_property(so, "component-objects"); ^ ctl-io.cpp: In function 'void ctlio::geometric_object_input(SCM, ctlio::geometric_object*)': ctl-io.cpp:264:58: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] material_type_input(object_object_property(so, "material"), &o->material); ^ ctl-io.cpp:265:49: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->center = vector3_object_property(so, "center"); ^ ctl-io.cpp:266:33: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] if (object_is_member("block", so)) { ^ ctl-io.cpp:271:39: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] else if (object_is_member("sphere", so)) { ^ ctl-io.cpp:276:41: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] else if (object_is_member("cylinder", so)) { ^ ctl-io.cpp:281:58: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] else if (object_is_member("compound-geometric-object", so)) { ^ ctl-io.cpp: In function 'void ctlio::material_function_input(SCM, ctlio::material_function*)': ctl-io.cpp:292:64: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->material_func = function_object_property(so, "material-func"); ^ ctl-io.cpp: In function 'void ctlio::medium_input(SCM, ctlio::medium*)': ctl-io.cpp:301:61: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->epsilon_diag = vector3_object_property(so, "epsilon-diag"); ^ ctl-io.cpp:302:67: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->epsilon_offdiag = vector3_object_property(so, "epsilon-offdiag"); ^ ctl-io.cpp:303:51: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->mu_diag = vector3_object_property(so, "mu-diag"); ^ ctl-io.cpp:304:57: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->mu_offdiag = vector3_object_property(so, "mu-offdiag"); ^ ctl-io.cpp:306:58: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] list lo_t = list_object_property(so, "E-susceptibilities"); ^ ctl-io.cpp:315:58: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] list lo_t = list_object_property(so, "H-susceptibilities"); ^ ctl-io.cpp:323:59: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->E_chi2_diag = vector3_object_property(so, "E-chi2-diag"); ^ ctl-io.cpp:324:59: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->E_chi3_diag = vector3_object_property(so, "E-chi3-diag"); ^ ctl-io.cpp:325:59: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->H_chi2_diag = vector3_object_property(so, "H-chi2-diag"); ^ ctl-io.cpp:326:59: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->H_chi3_diag = vector3_object_property(so, "H-chi3-diag"); ^ ctl-io.cpp:327:75: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->D_conductivity_diag = vector3_object_property(so, "D-conductivity-diag"); ^ ctl-io.cpp:328:75: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->B_conductivity_diag = vector3_object_property(so, "B-conductivity-diag"); ^ ctl-io.cpp: In function 'void ctlio::noisy_drude_susceptibility_input(SCM, ctlio::noisy_drude_susceptibility*)': ctl-io.cpp:333:54: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->noise_amp = number_object_property(so, "noise-amp"); ^ ctl-io.cpp: In function 'void ctlio::noisy_lorentzian_susceptibility_input(SCM, ctlio::noisy_lorentzian_susceptibility*)': ctl-io.cpp:338:54: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->noise_amp = number_object_property(so, "noise-amp"); ^ ctl-io.cpp: In function 'void ctlio::drude_susceptibility_input(SCM, ctlio::drude_susceptibility*)': ctl-io.cpp:343:54: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->frequency = number_object_property(so, "frequency"); ^ ctl-io.cpp:344:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->gamma = number_object_property(so, "gamma"); ^ ctl-io.cpp:345:54: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] if (object_is_member("noisy-drude-susceptibility", so)) { ^ ctl-io.cpp: In function 'void ctlio::lorentzian_susceptibility_input(SCM, ctlio::lorentzian_susceptibility*)': ctl-io.cpp:356:54: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->frequency = number_object_property(so, "frequency"); ^ ctl-io.cpp:357:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->gamma = number_object_property(so, "gamma"); ^ ctl-io.cpp:358:59: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] if (object_is_member("noisy-lorentzian-susceptibility", so)) { ^ ctl-io.cpp: In function 'void ctlio::susceptibility_input(SCM, ctlio::susceptibility*)': ctl-io.cpp:369:63: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->sigma_offdiag = vector3_object_property(so, "sigma-offdiag"); ^ ctl-io.cpp:370:57: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] o->sigma_diag = vector3_object_property(so, "sigma-diag"); ^ ctl-io.cpp:371:48: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] if (object_is_member("drude-susceptibility", so)) { ^ ctl-io.cpp:376:58: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] else if (object_is_member("lorentzian-susceptibility", so)) { ^ ctl-io.cpp: In function 'void ctlio::material_type_input(SCM, ctlio::material_type*)': ctl-io.cpp:387:45: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] if (object_is_member("material-function", so)) { ^ ctl-io.cpp:392:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] else if (object_is_member("perfect-metal", so)) { ^ ctl-io.cpp:397:39: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] else if (object_is_member("medium", so)) { ^ main.cpp: In function 'void main_entry(void*, int, char**)': main.cpp:223:22: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] ctl_include(CTL_SCM); ^ main.cpp:249:26: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] ctl_include(SPEC_SCM); ^ ctl-io.cpp: In function 'scm_unused_struct* ctlio::read_input_vars()': ctl-io.cpp:1419:57: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] epsilon_input_file = ctl_get_string("epsilon-input-file"); ^ ctl-io.cpp:1420:42: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] dimensions = ctl_get_integer("dimensions"); ^ ctl-io.cpp:1421:54: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] material_type_input(ctl_get_object("default-material"), &default_material); ^ ctl-io.cpp:1422:52: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] geometry_center = ctl_get_vector3("geometry-center"); ^ ctl-io.cpp:1423:48: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] lattice_input(ctl_get_object("geometry-lattice"), &geometry_lattice); ^ ctl-io.cpp:1425:36: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] list lo_t = ctl_get_list("geometry"); ^ ctl-io.cpp:1433:58: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] ensure_periodicity = ctl_get_boolean("ensure-periodicity"); ^ structure.cpp: In function 'meep::structure* make_structure(int, vector3, vector3, double, bool, double, int, bool, ctlio::geometric_object_list, ctlio::material_type_list, ctlio::material_type, const char*, ctlio::pml_list, ctlio::symmetry_list, int, double, double, double)': structure.cpp:1432:51: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] number no_size = 2.0 / ctl_get_number("infinity"); ^ CXXLD meep Making all in tests make[2]: Nothing to be done for `all'. Making all in examples make[2]: Nothing to be done for `all'. cp -f ./meep-pkgconfig meep.pc /bin/rm -rf /sw/build.build/root-meep-1.2-7 /bin/mkdir -p /sw/build.build/root-meep-1.2-7/sw /bin/mkdir -p /sw/build.build/root-meep-1.2-7/DEBIAN /usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-meep-1.2-7 sudo -u fink-bld [ENV] sh -c /tmp/fink.LWyT0 make install DESTDIR=/sw/build.build/root-meep-1.2-7 Making install in src /Applications/Xcode.app/Contents/Developer/usr/bin/make install-am .././install-sh -c -d '/sw/build.build/root-meep-1.2-7/sw/lib' /bin/sh ../libtool --mode=install /usr/bin/install -c libmeep.la '/sw/build.build/root-meep-1.2-7/sw/lib' libtool: install: /usr/bin/install -c .libs/libmeep.lai /sw/build.build/root-meep-1.2-7/sw/lib/libmeep.la libtool: install: /usr/bin/install -c .libs/libmeep.a /sw/build.build/root-meep-1.2-7/sw/lib/libmeep.a libtool: install: chmod 644 /sw/build.build/root-meep-1.2-7/sw/lib/libmeep.a libtool: install: ranlib /sw/build.build/root-meep-1.2-7/sw/lib/libmeep.a libtool: install: warning: remember to run `libtool --finish /sw/lib' .././install-sh -c -d '/sw/build.build/root-meep-1.2-7/sw/include' /usr/bin/install -c -m 644 meep.hpp '/sw/build.build/root-meep-1.2-7/sw/include' .././install-sh -c -d '/sw/build.build/root-meep-1.2-7/sw/include/meep' /usr/bin/install -c -m 644 meep/mympi.hpp meep/vec.hpp '/sw/build.build/root-meep-1.2-7/sw/include/meep' Making install in libctl /Applications/Xcode.app/Contents/Developer/usr/bin/make install-am .././install-sh -c -d '/sw/build.build/root-meep-1.2-7/sw/bin' /bin/sh ../libtool --mode=install /usr/bin/install -c meep '/sw/build.build/root-meep-1.2-7/sw/bin' libtool: install: /usr/bin/install -c meep /sw/build.build/root-meep-1.2-7/sw/bin/meep .././install-sh -c -d '/sw/build.build/root-meep-1.2-7/sw/share/meep' /usr/bin/install -c -m 644 meep.scm meep-enums.scm casimir.scm '/sw/build.build/root-meep-1.2-7/sw/share/meep' Making install in tests make[2]: Nothing to be done for `install-exec-am'. make[2]: Nothing to be done for `install-data-am'. Making install in examples make[2]: Nothing to be done for `install-exec-am'. make[2]: Nothing to be done for `install-data-am'. make[2]: Nothing to be done for `install-exec-am'. ./install-sh -c -d '/sw/build.build/root-meep-1.2-7/sw/lib/pkgconfig' /usr/bin/install -c -m 644 meep.pc '/sw/build.build/root-meep-1.2-7/sw/lib/pkgconfig' sudo -u fink-bld [ENV] sh -c /tmp/fink.N2e8A /usr/bin/install -d -m 700 /sw/build.build/root-meep-1.2-7/sw/share/doc/meep /bin/cp -r AUTHORS /sw/build.build/root-meep-1.2-7/sw/share/doc/meep/ /bin/cp -r COPYING /sw/build.build/root-meep-1.2-7/sw/share/doc/meep/ /bin/cp -r COPYRIGHT /sw/build.build/root-meep-1.2-7/sw/share/doc/meep/ /bin/cp -r ChangeLog /sw/build.build/root-meep-1.2-7/sw/share/doc/meep/ /bin/cp -r NEWS /sw/build.build/root-meep-1.2-7/sw/share/doc/meep/ /bin/cp -r README /sw/build.build/root-meep-1.2-7/sw/share/doc/meep/ /bin/cp -r TODO /sw/build.build/root-meep-1.2-7/sw/share/doc/meep/ /bin/cp -r examples /sw/build.build/root-meep-1.2-7/sw/share/doc/meep/ /bin/chmod -R go=u-w /sw/build.build/root-meep-1.2-7/sw/share/doc/meep /bin/rm -f /sw/build.build/root-meep-1.2-7/sw/info/dir /sw/build.build/root-meep-1.2-7/sw/info/dir.old /sw/build.build/root-meep-1.2-7/sw/share/info/dir /sw/build.build/root-meep-1.2-7/sw/share/info/dir.old Reverting ownership of install dir to root Writing control file... Writing md5sums file... env LANG=C LC_ALL=C dpkg-deb -b root-meep-1.2-7 /sw/fink/10.9/stable/main/binary-darwin-x86_64/sci dpkg-deb: building package `meep' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/sci/meep_1.2-7_darwin-x86_64.deb'. Removing runtime build-lock... Removing build-lock package... /sw/bin/dpkg-lockwait -r fink-buildlock-meep-1.2-7 (Reading database ... 11074 files and directories currently installed.) Removing fink-buildlock-meep-1.2-7 ...