printf '

' | fink --no-use-binary-dist --yes  --build-as-nobody rebuild octgpr-atlas-oct364 2>&1
The package 'octgpr-atlas-oct364' will be built without being installed.
Reading build dependency for octgpr-atlas-oct364-1.2.0-9...
Reading dependency for octgpr-atlas-oct364-1.2.0-9...
Reading build conflict for octgpr-atlas-oct364-1.2.0-9...

fink needs help picking an alternative to satisfy a virtual dependency. The
candidates:

(1)	octave364-atlas-x11-dev: MATLAB-like language for computations
(2)	octave364-atlas-dev: MATLAB-like language for computations

Pick one: [1] (assuming default)
The package 'atlas' will be installed.
Reading dependency for atlas-3.10.1-2...
Reading runtime dependency for atlas-3.10.1-2...
The package 'octave364-atlas-x11-dev' will be installed.
Reading dependency for octave364-atlas-x11-dev-3.6.4-9...
Reading runtime dependency for octave364-atlas-x11-dev-3.6.4-9...
The package 'fftw3' will be installed.
Reading dependency for fftw3-3.3.4-2...
Reading runtime dependency for fftw3-3.3.4-2...
The package 'hdf5.8' will be installed.
Reading dependency for hdf5.8-1.8.13-1...
Reading runtime dependency for hdf5.8-1.8.13-1...
The package 'atlas-shlibs' will be installed.
Reading dependency for atlas-shlibs-3.10.1-2...
Reading runtime dependency for atlas-shlibs-3.10.1-2...
The package 'octave364-atlas-x11' will be installed.
Reading dependency for octave364-atlas-x11-3.6.4-9...
Reading runtime dependency for octave364-atlas-x11-3.6.4-9...

fink needs help picking an alternative to satisfy a virtual dependency. The
candidates:

(1)	gnuplot-minimal: Command-driven interactive plotting program
(2)	gnuplot-qtmac: Command-driven interactive plotting program
(3)	gnuplot-qtx11: Command-driven interactive plotting program
(4)	gnuplot-wxcocoa: Command-driven interactive plotting program
(5)	gnuplot-wxgtk: Command-driven interactive plotting program
(6)	gnuplot-wxcocoa-qtmac: Command-driven interactive plotting program
(7)	gnuplot: Command-driven interactive plotting program
(8)	gnuplot-wxgtk-qtmac: Command-driven interactive plotting program
(9)	gnuplot-wxgtk-qtx11: Command-driven interactive plotting program
(10)	gnuplot-wxcocoa-qtx11: Command-driven interactive plotting program

Pick one: [1] (assuming default)

fink needs help picking an alternative to satisfy a virtual dependency. The
candidates:

(1)	arpack-ng-atlas-shlibs: Solve large scale eigenvalue problems
(2)	arpack-ng-mpi-atlas-shlibs: Solve large scale eigenvalue problems

Pick one: [1] (assuming default)

fink needs help picking an alternative to satisfy a virtual dependency. The
candidates:

(1)	ghostscript: Interpreter for PostScript and PDF
(2)	ghostscript-nox: Interpreter for PostScript and PDF

Pick one: [1] (assuming default)

fink needs help picking an alternative to satisfy a virtual dependency. The
candidates:

(1)	transfig-graphicx: Convert xfig objects
(2)	transfig-epsfig: Convert xfig objects

Pick one: [1] (assuming default)
The package 'octave364-atlas-x11-shlibs' will be installed.
Reading dependency for octave364-atlas-x11-shlibs-3.6.4-9...
Reading runtime dependency for octave364-atlas-x11-shlibs-3.6.4-9...
The package 'gcc48-compiler' will be installed.
Reading dependency for gcc48-compiler-4.8.3-1000...
Reading runtime dependency for gcc48-compiler-4.8.3-1000...
The package 'fftw3-shlibs' will be installed.
Reading dependency for fftw3-shlibs-3.3.4-2...
Reading runtime dependency for fftw3-shlibs-3.3.4-2...
The package 'hdf5.8-shlibs' will be installed.
Reading dependency for hdf5.8-shlibs-1.8.13-1...
Reading runtime dependency for hdf5.8-shlibs-1.8.13-1...
The package 'hdf5.8-bin' will be installed.
Reading dependency for hdf5.8-bin-1.8.13-1...
Reading runtime dependency for hdf5.8-bin-1.8.13-1...
The package 'szip-shlibs' will be installed.
Reading dependency for szip-shlibs-2.1-3...
Reading runtime dependency for szip-shlibs-2.1-3...
The package 'gcc49-shlibs' will be installed.
Reading dependency for gcc49-shlibs-4.9.1-1000...
Reading runtime dependency for gcc49-shlibs-4.9.1-1000...
The package 'gnuplot-minimal' will be installed.
Reading dependency for gnuplot-minimal-4.6.5-1...
Reading runtime dependency for gnuplot-minimal-4.6.5-1...
The package 'gcc48-shlibs' will be installed.
Reading dependency for gcc48-shlibs-4.8.3-1000...
Reading runtime dependency for gcc48-shlibs-4.8.3-1000...
The package 'glpk-shlibs' will be installed.
Reading dependency for glpk-shlibs-4.44-1...
Reading runtime dependency for glpk-shlibs-4.44-1...
The package 'graphicsmagick-shlibs' will be installed.
Reading dependency for graphicsmagick-shlibs-1.3.19-1...
Reading runtime dependency for graphicsmagick-shlibs-1.3.19-1...
The package 'libcurl4-shlibs' will be installed.
Reading dependency for libcurl4-shlibs-7.37.1-1+10.8...
Reading runtime dependency for libcurl4-shlibs-7.37.1-1+10.8...
The package 'qhull6.3.1-shlibs' will be installed.
Reading dependency for qhull6.3.1-shlibs-2012.1-3...
Reading runtime dependency for qhull6.3.1-shlibs-2012.1-3...
The package 'suitesparse-shlibs' will be installed.
Reading dependency for suitesparse-shlibs-4.2.1-1...
Reading runtime dependency for suitesparse-shlibs-4.2.1-1...
The package 'fltk-x11-shlibs' will be installed.
Reading dependency for fltk-x11-shlibs-1.1.10-2...
Reading runtime dependency for fltk-x11-shlibs-1.1.10-2...
The package 'arpack-ng-atlas-shlibs' will be installed.
Reading dependency for arpack-ng-atlas-shlibs-3.1.5-3...
Reading runtime dependency for arpack-ng-atlas-shlibs-3.1.5-3...
The package 'epstool' will be installed.
Reading dependency for epstool-3.08-1...
Reading runtime dependency for epstool-3.08-1...
The package 'ghostscript' will be installed.
Reading dependency for ghostscript-9.14-1...
Reading runtime dependency for ghostscript-9.14-1...
The package 'transfig-graphicx' will be installed.
Reading dependency for transfig-graphicx-3.2.5d-1014...
Reading runtime dependency for transfig-graphicx-3.2.5d-1014...
The package 'pstoedit-bin' will be installed.
Reading dependency for pstoedit-bin-3.62-2...
Reading runtime dependency for pstoedit-bin-3.62-2...
The package 'fontconfig2-shlibs' will be installed.
Reading dependency for fontconfig2-shlibs-2.10.2-1...
Reading runtime dependency for fontconfig2-shlibs-2.10.2-1...
The package 'freetype219-shlibs' will be installed.
Reading dependency for freetype219-shlibs-2.4.12-1...
Reading runtime dependency for freetype219-shlibs-2.4.12-1...
The package 'libpcre1-shlibs' will be installed.
Reading dependency for libpcre1-shlibs-8.35-1...
Reading runtime dependency for libpcre1-shlibs-8.35-1...
The package 'readline6-shlibs' will be installed.
Reading dependency for readline6-shlibs-6.3.6-1...
Reading runtime dependency for readline6-shlibs-6.3.6-1...
The package 'qrupdate-atlas-shlibs' will be installed.
Reading dependency for qrupdate-atlas-shlibs-1.1.2-9...
Reading runtime dependency for qrupdate-atlas-shlibs-1.1.2-9...
The package 'gmp5-shlibs' will be installed.
Reading dependency for gmp5-shlibs-6.0.0a-1...
Reading runtime dependency for gmp5-shlibs-6.0.0a-1...
The package 'libgmpxx5-shlibs' will be installed.
Reading dependency for libgmpxx5-shlibs-6.0.0a-1...
Reading runtime dependency for libgmpxx5-shlibs-6.0.0a-1...
The package 'libmpfr4-shlibs' will be installed.
Reading dependency for libmpfr4-shlibs-3.1.2-1...
Reading runtime dependency for libmpfr4-shlibs-3.1.2-1...
The package 'cloog-org2-shlibs' will be installed.
Reading dependency for cloog-org2-shlibs-0.18.2-1...
Reading runtime dependency for cloog-org2-shlibs-0.18.2-1...
The package 'isl-shlibs' will be installed.
Reading dependency for isl-shlibs-0.12.2-2...
Reading runtime dependency for isl-shlibs-0.12.2-2...
The package 'libmpc3-shlibs' will be installed.
Reading dependency for libmpc3-shlibs-1.0.2-1...
Reading runtime dependency for libmpc3-shlibs-1.0.2-1...
The package 'aquaterm' will be installed.
Reading dependency for aquaterm-1.1.1-2...
Reading runtime dependency for aquaterm-1.1.1-2...
The package 'emacsen-common' will be installed.
Reading dependency for emacsen-common-1.4.15-5...
Reading runtime dependency for emacsen-common-1.4.15-5...
The package 'libjpeg9-shlibs' will be installed.
Reading dependency for libjpeg9-shlibs-9a-1...
Reading runtime dependency for libjpeg9-shlibs-9a-1...
The package 'libpng16-shlibs' will be installed.
Reading dependency for libpng16-shlibs-1.6.12-1...
Reading runtime dependency for libpng16-shlibs-1.6.12-1...
The package 'lua51-shlibs' will be installed.
Reading dependency for lua51-shlibs-5.1.5-2...
Reading runtime dependency for lua51-shlibs-5.1.5-2...
The package 'pdflib6-shlibs' will be installed.
Reading dependency for pdflib6-shlibs-7.0.5p3-1...
Reading runtime dependency for pdflib6-shlibs-7.0.5p3-1...
The package 'lcms2-shlibs' will be installed.
Reading dependency for lcms2-shlibs-2.4-2...
Reading runtime dependency for lcms2-shlibs-2.4-2...
The package 'libjasper.1-shlibs' will be installed.
Reading dependency for libjasper.1-shlibs-1.900.1-5...
Reading runtime dependency for libjasper.1-shlibs-1.900.1-5...
The package 'libjbig-shlibs' will be installed.
Reading dependency for libjbig-shlibs-2.0-1...
Reading runtime dependency for libjbig-shlibs-2.0-1...
The package 'libtiff5-shlibs' will be installed.
Reading dependency for libtiff5-shlibs-4.0.3-5...
Reading runtime dependency for libtiff5-shlibs-4.0.3-5...
The package 'libtool2-shlibs' will be installed.
Reading dependency for libtool2-shlibs-2.4.2-3...
Reading runtime dependency for libtool2-shlibs-2.4.2-3...
The package 'libwebp5-shlibs' will be installed.
Reading dependency for libwebp5-shlibs-0.4.0-1...
Reading runtime dependency for libwebp5-shlibs-0.4.0-1...
The package 'libxml2-shlibs' will be installed.
Reading dependency for libxml2-shlibs-2.9.1-3...
Reading runtime dependency for libxml2-shlibs-2.9.1-3...
The package 'librtmp-shlibs' will be installed.
Reading dependency for librtmp-shlibs-2.3-4...
Reading runtime dependency for librtmp-shlibs-2.3-4...
The package 'libssh2.1-shlibs' will be installed.
Reading dependency for libssh2.1-shlibs-1.4.3-1...
Reading runtime dependency for libssh2.1-shlibs-1.4.3-1...
The package 'xft2-shlibs' will be installed.
Reading dependency for xft2-shlibs-2.2.0-3...
Reading runtime dependency for xft2-shlibs-2.2.0-3...
The package 'ghostscript-fonts' will be installed.
Reading dependency for ghostscript-fonts-8.11-3...
Reading runtime dependency for ghostscript-fonts-8.11-3...
The package 'libpaper1-shlibs' will be installed.
Reading dependency for libpaper1-shlibs-1.1.24-1...
Reading runtime dependency for libpaper1-shlibs-1.1.24-1...
The package 'libjbig2dec-shlibs' will be installed.
Reading dependency for libjbig2dec-shlibs-0.11-4...
Reading runtime dependency for libjbig2dec-shlibs-0.11-4...
The package 'libidn-shlibs' will be installed.
Reading dependency for libidn-shlibs-1.22-6...
Reading runtime dependency for libidn-shlibs-1.22-6...
The package 'libopenjpeg1-shlibs' will be installed.
Reading dependency for libopenjpeg1-shlibs-1.5.0-4...
Reading runtime dependency for libopenjpeg1-shlibs-1.5.0-4...
The package 'libjpeg-bin' will be installed.
Reading dependency for libjpeg-bin-9a-1...
Reading runtime dependency for libjpeg-bin-9a-1...
The package 'libtiff-bin' will be installed.
Reading dependency for libtiff-bin-4.0.3-5...
Reading runtime dependency for libtiff-bin-4.0.3-5...
The package 'netpbm-bin' will be installed.
Reading dependency for netpbm-bin-10.65.07-1...
Reading runtime dependency for netpbm-bin-10.65.07-1...
The package 'pstoedit-shlibs' will be installed.
Reading dependency for pstoedit-shlibs-3.62-2...
Reading runtime dependency for pstoedit-shlibs-3.62-2...
The package 'gd2-shlibs' will be installed.
Reading dependency for gd2-shlibs-2.0.35-14...
Reading runtime dependency for gd2-shlibs-2.0.35-14...
The package 'fontconfig-config' will be installed.
Reading dependency for fontconfig-config-2.10.2-1...
Reading runtime dependency for fontconfig-config-2.10.2-1...
The package 'expat1-shlibs' will be installed.
Reading dependency for expat1-shlibs-2.1.0-1...
Reading runtime dependency for expat1-shlibs-2.1.0-1...
The package 'aquaterm-shlibs' will be installed.
Reading dependency for aquaterm-shlibs-1.1.1-2...
Reading runtime dependency for aquaterm-shlibs-1.1.1-2...
The package 'liblzma5-shlibs' will be installed.
Reading dependency for liblzma5-shlibs-5.0.5-2...
Reading runtime dependency for liblzma5-shlibs-5.0.5-2...
The package 'openssl100-shlibs' will be installed.
Reading dependency for openssl100-shlibs-1.0.1h-1...
Reading runtime dependency for openssl100-shlibs-1.0.1h-1...
The package 'netpbm11-shlibs' will be installed.
Reading dependency for netpbm11-shlibs-10.65.07-1...
Reading runtime dependency for netpbm11-shlibs-10.65.07-1...
The package 'imagemagick7-shlibs' will be installed.
Reading dependency for imagemagick7-shlibs-6.8.2.6-6...
Reading runtime dependency for imagemagick7-shlibs-6.8.2.6-6...
The package 'libemf-shlibs' will be installed.
Reading dependency for libemf-shlibs-1.0.7-1...
Reading runtime dependency for libemf-shlibs-1.0.7-1...
The package 'libming1-shlibs' will be installed.
Reading dependency for libming1-shlibs-0.4.5-3...
Reading runtime dependency for libming1-shlibs-0.4.5-3...
The package 'libzip2-shlibs' will be installed.
Reading dependency for libzip2-shlibs-0.11.2-1...
Reading runtime dependency for libzip2-shlibs-0.11.2-1...
The package 'plotutils-shlibs' will be installed.
Reading dependency for plotutils-shlibs-2.6-3...
Reading runtime dependency for plotutils-shlibs-2.6-3...
The package 'cairo-shlibs' will be installed.
Reading dependency for cairo-shlibs-1.12.14-1...
Reading runtime dependency for cairo-shlibs-1.12.14-1...
The package 'glib2-shlibs' will be installed.
Reading dependency for glib2-shlibs-2.22.4-8...
Reading runtime dependency for glib2-shlibs-2.22.4-8...
The package 'gtk+2-shlibs' will be installed.
Reading dependency for gtk+2-shlibs-2.18.9-11...
Reading runtime dependency for gtk+2-shlibs-2.18.9-11...
The package 'ilmbase-shlibs' will be installed.
Reading dependency for ilmbase-shlibs-1.0.2-2...
Reading runtime dependency for ilmbase-shlibs-1.0.2-2...
The package 'libdjvulibre21-shlibs' will be installed.
Reading dependency for libdjvulibre21-shlibs-3.5.25.3-3...
Reading runtime dependency for libdjvulibre21-shlibs-3.5.25.3-3...
The package 'libopenexr6-shlibs' will be installed.
Reading dependency for libopenexr6-shlibs-1.7.0-3...
Reading runtime dependency for libopenexr6-shlibs-1.7.0-3...
The package 'librsvg2-shlibs' will be installed.
Reading dependency for librsvg2-shlibs-2.26.3-1...
Reading runtime dependency for librsvg2-shlibs-2.26.3-1...
The package 'libwebp4-shlibs' will be installed.
Reading dependency for libwebp4-shlibs-0.3.1-2...
Reading runtime dependency for libwebp4-shlibs-0.3.1-2...
The package 'libwmf-shlibs' will be installed.
Reading dependency for libwmf-shlibs-0.2.8.4-4...
Reading runtime dependency for libwmf-shlibs-0.2.8.4-4...
The package 'giflib-shlibs' will be installed.
Reading dependency for giflib-shlibs-4.1.6-103...
Reading runtime dependency for giflib-shlibs-4.1.6-103...
The package 'pixman-shlibs' will be installed.
Reading dependency for pixman-shlibs-0.32.4-1...
Reading runtime dependency for pixman-shlibs-0.32.4-1...
The package 'xdg-base' will be installed.
Reading dependency for xdg-base-0.8-2...
Reading runtime dependency for xdg-base-0.8-2...
The package 'atk1-shlibs' will be installed.
Reading dependency for atk1-shlibs-1.32.0-1...
Reading runtime dependency for atk1-shlibs-1.32.0-1...
The package 'pango1-xft2-ft219-shlibs' will be installed.
Reading dependency for pango1-xft2-ft219-shlibs-1.24.5-9...
Reading runtime dependency for pango1-xft2-ft219-shlibs-1.24.5-9...
The package 'shared-mime-info' will be installed.
Reading dependency for shared-mime-info-1.3-1...
Reading runtime dependency for shared-mime-info-1.3-1...
The package 'libcroco3-shlibs' will be installed.
Reading dependency for libcroco3-shlibs-0.6.8-1...
Reading runtime dependency for libcroco3-shlibs-0.6.8-1...
The package 'libgsf1.114-shlibs' will be installed.
Reading dependency for libgsf1.114-shlibs-1.14.21-1...
Reading runtime dependency for libgsf1.114-shlibs-1.14.21-1...
The package 'gtk+2' will be installed.
Reading dependency for gtk+2-2.18.9-11...
Reading runtime dependency for gtk+2-2.18.9-11...
The package 'libthai-shlibs' will be installed.
Reading dependency for libthai-shlibs-0.1.20-1...
Reading runtime dependency for libthai-shlibs-0.1.20-1...
The package 'pkgconfig' will be installed.
Reading dependency for pkgconfig-0.28-1...
Reading runtime dependency for pkgconfig-0.28-1...
The package 'libdatrie1-shlibs' will be installed.
Reading dependency for libdatrie1-shlibs-0.2.8-2...
Reading runtime dependency for libdatrie1-shlibs-0.2.8-2...
The package 'libthai' will be installed.
Reading dependency for libthai-0.1.20-1...
Reading runtime dependency for libthai-0.1.20-1...
The following package will be rebuilt:
 octgpr-atlas-oct364
The following 96 additional packages will be installed:
 aquaterm aquaterm-shlibs arpack-ng-atlas-shlibs atk1-shlibs atlas
 atlas-shlibs cairo-shlibs cloog-org2-shlibs emacsen-common epstool
 expat1-shlibs fftw3 fftw3-shlibs fltk-x11-shlibs fontconfig-config
 fontconfig2-shlibs freetype219-shlibs gcc48-compiler gcc48-shlibs
 gcc49-shlibs gd2-shlibs ghostscript ghostscript-fonts giflib-shlibs
 glib2-shlibs glpk-shlibs gmp5-shlibs gnuplot-minimal graphicsmagick-shlibs
 gtk+2 gtk+2-shlibs hdf5.8 hdf5.8-bin hdf5.8-shlibs ilmbase-shlibs
 imagemagick7-shlibs isl-shlibs lcms2-shlibs libcroco3-shlibs libcurl4-shlibs
 libdatrie1-shlibs libdjvulibre21-shlibs libemf-shlibs libgmpxx5-shlibs
 libgsf1.114-shlibs libidn-shlibs libjasper.1-shlibs libjbig-shlibs
 libjbig2dec-shlibs libjpeg-bin libjpeg9-shlibs liblzma5-shlibs
 libming1-shlibs libmpc3-shlibs libmpfr4-shlibs libopenexr6-shlibs
 libopenjpeg1-shlibs libpaper1-shlibs libpcre1-shlibs libpng16-shlibs
 librsvg2-shlibs librtmp-shlibs libssh2.1-shlibs libthai libthai-shlibs
 libtiff-bin libtiff5-shlibs libtool2-shlibs libwebp4-shlibs libwebp5-shlibs
 libwmf-shlibs libxml2-shlibs libzip2-shlibs lua51-shlibs netpbm-bin
 netpbm11-shlibs octave364-atlas-x11 octave364-atlas-x11-dev
 octave364-atlas-x11-shlibs openssl100-shlibs pango1-xft2-ft219-shlibs
 pdflib6-shlibs pixman-shlibs pkgconfig plotutils-shlibs pstoedit-bin
 pstoedit-shlibs qhull6.3.1-shlibs qrupdate-atlas-shlibs readline6-shlibs
 shared-mime-info suitesparse-shlibs szip-shlibs transfig-graphicx xdg-base
 xft2-shlibs
Do you want to continue? [Y/n] (assuming default)
Reading buildlock packages...
	All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i /sw/fink/debs/aquaterm_1.1.1-2_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/aquaterm-shlibs_1.1.1-2_darwin-x86_64.deb
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Setting up aquaterm (1.1.1-2) ...

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/sw/bin/dpkg-lockwait -i /sw/fink/debs/emacsen-common_1.4.15-5_darwin-x86_64.deb
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Setting up emacsen-common (1.4.15-5) ...
defined(@array) is deprecated at /sw/lib/emacsen-common/generate-install-list line 24.
	(Maybe you should just omit the defined()?)
emacsen-common: Handling install of emacsen flavor emacs

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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/freetype219-shlibs_2.4.12-1_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/gcc49-shlibs_4.9.1-1000_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/debs/ghostscript-fonts_8.11-3_darwin-x86_64.deb
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/sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/giflib-shlibs_4.1.6-103_darwin-x86_64.deb
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* fftw3: (fftw3). FFTW User's Manual.
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defined(@array) is deprecated at /sw/lib/emacsen-common/generate-install-list line 24.
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* GNUPLOT: (gnuplot). An Interactive Plotting Program
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dpkg-deb -b /sw/build.build/root-fink-buildlock-octgpr-atlas-oct364-1.2.0-9 /sw/build.build
dpkg-deb: building package `fink-buildlock-octgpr-atlas-oct364-1.2.0-9' in `/sw/build.build/fink-buildlock-octgpr-atlas-oct364-1.2.0-9_2014.08.02-02.15.43_darwin-x86_64.deb'.
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env LANG=C LC_ALL=C /sw/bin/tar  --no-same-owner --no-same-permissions -xvf /sw/src/octgpr-1.2.0.tar.gz
octgpr/
octgpr/inst/
octgpr/inst/demo_octgpr.m
octgpr/inst/rbf_centers.m
octgpr/src/
octgpr/src/dscrot.f
octgpr/src/forsubs.h
octgpr/src/nldgpr.f
octgpr/src/infgpr.f
octgpr/src/stheta.f
octgpr/src/nldpgp.f
octgpr/src/pakgpr.f
octgpr/src/Makefile.in
octgpr/src/dgesum.f
octgpr/src/nl0pgp.f
octgpr/src/train.c
octgpr/src/corrf.f
octgpr/src/nllpgp.f
octgpr/src/dtr2tp.f
octgpr/src/gpr_predict.cc
octgpr/src/dspmid.f
octgpr/src/configure.base
octgpr/src/pgp_predict.cc
octgpr/src/predict.c
octgpr/src/dscsev.f
octgpr/src/config.h.in
octgpr/src/infpgp.f
octgpr/src/nllgpr.f
octgpr/src/get_corrf.c
octgpr/src/pakpgp.f
octgpr/src/setup.c
octgpr/src/optdrv.f
octgpr/src/autogen.sh
octgpr/src/trstp.f
octgpr/src/pgp_train.cc
octgpr/src/dwdis2.f
octgpr/src/gprmod.h
octgpr/src/dsumsq.f
octgpr/src/dxnrm2.f
octgpr/src/pdist2_mw.cc
octgpr/src/configure
octgpr/src/sr1upd.f
octgpr/src/nl0gpr.f
octgpr/src/gpr_train.cc
octgpr/src/dsdacc.f
octgpr/TODO
octgpr/README
octgpr/INDEX
octgpr/Makefile
octgpr/ChangeLog
octgpr/DESCRIPTION
octgpr/COPYING
/tmp/fink.uCUqb
#!/bin/sh -ev
if [ $UID -ne 0 ]
then 
	echo "octgpr-atlas-oct364 cannot be built with --build-as-nobody"
	exit 1
fi
export OCTAVE=/sw/bin/octave-3.6.4 
if [ "-atlas" = "-atlas" ]
	then
	# override mkoctfile's BLAS_LIBS for atlas case since it seems not 
	# to be in the right format for _this_ package
	blaslibs=`mkoctfile-3.6.4 -p BLAS_LIBS | perl -p -e 's|/sw/lib/lib(.*?).dylib|-l\1|g'`
	export BLAS_LIBS='-L/sw/lib '$blaslibs 
fi
mkoctfile-3.6.4 -p BLAS_LIBS | perl -p -e 's|/sw/lib/lib(.*?).dylib|-l\1|g'
# repack tarball, since octave-3.4.3 appears not to want to install
# from directories
cd ..
tar -cf octgpr.tar octgpr
cd /sw/build.build/octgpr-atlas-oct364-1.2.0-9/octgpr
/sw/share/octave/3.6.4/scripts/octave-forge-compile.sh octgpr.tar
#!/bin/sh -ev
cd ..
mkdir -p bld/share/octave/3.6.4/packages bld/lib/octave/3.6.4/packages
cp /sw/share/octave/3.6.4/scripts/octave-forge-comp /sw/share/octave/3.6.4/scripts/octave-forge-inst bld
chmod a+x bld/octave-forge*
sed -i.bak -e "s/@PKGNAME@/$1/" bld/octave-forge*
`which xvfb-run` bld/octave-forge-comp
which xvfb-run
GNU Octave, version 3.6.4
Copyright (C) 2013 John W. Eaton and others.
This is free software; see the source code for copying conditions.
There is ABSOLUTELY NO WARRANTY; not even for MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE.  For details, type `warranty'.

Octave was configured for "x86_64-apple-darwin".

Additional information about Octave is available at http://www.octave.org.

Please contribute if you find this software useful.
For more information, visit http://www.octave.org/get-involved.html

Read http://www.octave.org/bugs.html to learn how to submit bug reports.

For information about changes from previous versions, type `news'.

warning: X11 DISPLAY environment variable not set
executing commands from /sw/share/octave/3.6.4/m/startup/octaverc ... done.

ans = /sw/build.build/octgpr-atlas-oct364-1.2.0-9/bld/share/octave/3.6.4/packages
mkdir (/var/tmp/oct-Ipx8aG)
untar (./octgpr.tar, /var/tmp/oct-Ipx8aG)
checking for mkoctfile... /sw/bin/mkoctfile-3.6.4
checking for Fortran 77 compiler default output file name... a.out
checking whether the Fortran 77 compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether /sw/bin/gfortran-fsf-4.8 accepts -g... yes
checking whether we are using the GNU C compiler... yes
checking whether oct-cc accepts -g... yes
checking for oct-cc option to accept ISO C89... none needed
checking how to run the C preprocessor... oct-cc -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for stdbool.h that conforms to C99... yes
checking for _Bool... yes
checking for an ANSI C-conforming const... yes
checking for error_at_line... no
checking for stdlib.h... (cached) yes
checking for GNU libc compatible malloc... yes
checking for fprintf... yes
checking for fflush... yes
checking how to get verbose linking output from /sw/bin/gfortran-fsf-4.8... -v
checking for Fortran 77 libraries of /sw/bin/gfortran-fsf-4.8...  -L/usr/X11R6/lib -L/sw/lib -L/sw/lib/gcc4.8/lib/gcc/x86_64-apple-darwin13.3.0/4.8.3 -L/sw/lib/gcc4.8/lib/gcc/x86_64-apple-darwin13.3.0/4.8.3/../../.. -lgfortran -lquadmath -lm
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore
-n checking /sw/bin/mkoctfile-3.6.4 for $BLAS_LIBS... 
-L/sw/lib -ltatlas
checking for library containing dtpsv... none required
checking for library containing dspr... none required
checking for library containing dpotrf... none required
checking for library containing dgeqr2... none required
checking for library containing dorm2r... none required
checking for library containing dtrtrs... none required
checking for library containing dpotri... none required
checking for library containing dsyev... none required
configure: creating ./config.status
config.status: creating Makefile
config.status: creating config.h
configure: creating ./config.status
config.status: creating Makefile
config.status: creating config.h
config.status: config.h is unchanged
 
  "$prefix" is /sw/build.build/octgpr-atlas-oct364-1.2.0-9/bld/share/octave/3.6.4/packages/octgpr-1.2.0
  "$exec_prefix" is ${prefix}


find . -name NOINSTALL -print    # shows which toolboxes won't be installed

/sw/bin/mkoctfile-3.6.4 -c gpr_train.cc
/sw/bin/gfortran-fsf-4.8 -O3 -fPIC -fPIC -c dsdacc.f
/sw/bin/gfortran-fsf-4.8 -O3 -fPIC -fPIC -c dwdis2.f
/sw/bin/gfortran-fsf-4.8 -O3 -fPIC -fPIC -c dtr2tp.f
/sw/bin/gfortran-fsf-4.8 -O3 -fPIC -fPIC -c corrf.f
/sw/bin/gfortran-fsf-4.8 -O3 -fPIC -fPIC -c stheta.f
/sw/bin/gfortran-fsf-4.8 -O3 -fPIC -fPIC -c nllgpr.f
/sw/bin/gfortran-fsf-4.8 -O3 -fPIC -fPIC -c nldgpr.f
/sw/bin/gfortran-fsf-4.8 -O3 -fPIC -fPIC -c nl0gpr.f
/sw/bin/gfortran-fsf-4.8 -O3 -fPIC -fPIC -c pakgpr.f
/sw/bin/gfortran-fsf-4.8 -O3 -fPIC -fPIC -c nllpgp.f
/sw/bin/gfortran-fsf-4.8 -O3 -fPIC -fPIC -c nldpgp.f
/sw/bin/gfortran-fsf-4.8 -O3 -fPIC -fPIC -c nl0pgp.f
/sw/bin/gfortran-fsf-4.8 -O3 -fPIC -fPIC -c pakpgp.f
/sw/bin/gfortran-fsf-4.8 -O3 -fPIC -fPIC -c dscrot.f
/sw/bin/gfortran-fsf-4.8 -O3 -fPIC -fPIC -c dscsev.f
/sw/bin/gfortran-fsf-4.8 -O3 -fPIC -fPIC -c dspmid.f
/sw/bin/gfortran-fsf-4.8 -O3 -fPIC -fPIC -c dxnrm2.f
/sw/bin/gfortran-fsf-4.8 -O3 -fPIC -fPIC -c dgesum.f
/sw/bin/gfortran-fsf-4.8 -O3 -fPIC -fPIC -c dsumsq.f
/sw/bin/gfortran-fsf-4.8 -O3 -fPIC -fPIC -c trstp.f
/sw/bin/gfortran-fsf-4.8 -O3 -fPIC -fPIC -c sr1upd.f
/sw/bin/gfortran-fsf-4.8 -O3 -fPIC -fPIC -c optdrv.f
oct-cc -fPIC -O3 -MD -D_THREAD_SAFE -pthread -fPIC -I. -c get_corrf.c
oct-cc -fPIC -O3 -MD -D_THREAD_SAFE -pthread -fPIC -I. -c train.c
oct-cc -fPIC -O3 -MD -D_THREAD_SAFE -pthread -fPIC -I. -c setup.c
/sw/bin/mkoctfile-3.6.4 -o gpr_train.oct gpr_train.o dsdacc.o dwdis2.o dtr2tp.o corrf.o stheta.o nllgpr.o nldgpr.o nl0gpr.o pakgpr.o nllpgp.o nldpgp.o nl0pgp.o pakpgp.o dscrot.o dscsev.o dspmid.o dxnrm2.o dgesum.o dsumsq.o trstp.o sr1upd.o optdrv.o get_corrf.o train.o setup.o  -L/sw/lib -ltatlas
/sw/bin/mkoctfile-3.6.4 -c gpr_predict.cc
/sw/bin/gfortran-fsf-4.8 -O3 -fPIC -fPIC -c infgpr.f
/sw/bin/gfortran-fsf-4.8 -O3 -fPIC -fPIC -c infpgp.f
oct-cc -fPIC -O3 -MD -D_THREAD_SAFE -pthread -fPIC -I. -c predict.c
/sw/bin/mkoctfile-3.6.4 -o gpr_predict.oct gpr_predict.o dsdacc.o dwdis2.o dsumsq.o infgpr.o infpgp.o corrf.o get_corrf.o predict.o  -L/sw/lib -ltatlas
/sw/bin/mkoctfile-3.6.4 -c pgp_train.cc
/sw/bin/mkoctfile-3.6.4 -o pgp_train.oct pgp_train.o dsdacc.o dwdis2.o dtr2tp.o corrf.o stheta.o nllgpr.o nldgpr.o nl0gpr.o pakgpr.o nllpgp.o nldpgp.o nl0pgp.o pakpgp.o dscrot.o dscsev.o dspmid.o dxnrm2.o dgesum.o dsumsq.o trstp.o sr1upd.o optdrv.o get_corrf.o train.o setup.o  -L/sw/lib -ltatlas
/sw/bin/mkoctfile-3.6.4 -c pgp_predict.cc
/sw/bin/mkoctfile-3.6.4 -o pgp_predict.oct pgp_predict.o dsdacc.o dwdis2.o dsumsq.o infgpr.o infpgp.o corrf.o get_corrf.o predict.o  -L/sw/lib -ltatlas
/sw/bin/mkoctfile-3.6.4 -o pdist2_mw.oct pdist2_mw.cc
copyfile /var/tmp/oct-Ipx8aG/octgpr/src/gpr_predict.oct /var/tmp/oct-Ipx8aG/octgpr/src/gpr_train.oct /var/tmp/oct-Ipx8aG/octgpr/src/pdist2_mw.oct /var/tmp/oct-Ipx8aG/octgpr/src/pgp_predict.oct /var/tmp/oct-Ipx8aG/octgpr/src/pgp_train.oct /var/tmp/oct-Ipx8aG/octgpr/inst/x86_64-apple-darwin-api-v48+
/var/tmp/octave-help-BFyKvu:15: Unmatched }.
/var/tmp/octave-help-BFyKvu:21: @var missing close brace.
warning: gen_doc_cache: unusable help text found in file 'demo_octgpr'
/bin/rm -rf /sw/build.build/root-octgpr-atlas-oct364-1.2.0-9
/bin/mkdir -p /sw/build.build/root-octgpr-atlas-oct364-1.2.0-9/sw
/bin/mkdir -p /sw/build.build/root-octgpr-atlas-oct364-1.2.0-9/DEBIAN
/usr/sbin/chown -R root:admin /sw/build.build/root-octgpr-atlas-oct364-1.2.0-9
/tmp/fink.WNon5
#!/bin/sh -ev
	/sw/share/octave/3.6.4/scripts/octave-forge-install.sh octgpr-1.2.0 /sw/build.build/root-octgpr-atlas-oct364-1.2.0-9/sw /sw/build.build/octgpr-atlas-oct364-1.2.0-9/octgpr
#!/bin/sh -ev
cd $2
cp -r $3/../bld/{share,lib} .
`which xvfb-run` $3/../bld/octave-forge-inst
which xvfb-run
warning: X11 DISPLAY environment variable not set
mv share/octave/3.6.4/octave_packages share/octave/3.6.4/packages/$1/.
	mkdir -p /sw/build.build/root-octgpr-atlas-oct364-1.2.0-9/sw/share/octave/3.6.4/octgpr-1.2.0
	# copy template scripts
	cp /sw/share/octave/3.6.4/scripts/octave-forge-prerm /sw/share/octave/3.6.4/scripts/octave-forge-postinst /sw/build.build/root-octgpr-atlas-oct364-1.2.0-9/sw/share/octave/3.6.4/octgpr-1.2.0
	cd /sw/build.build/root-octgpr-atlas-oct364-1.2.0-9/sw/share/octave/3.6.4/octgpr-1.2.0
	sed -i -e 's/@PKGNAME@/octgpr-1.2.0/' octave-forge-postinst
	sed -i -e 's/@PKGNAME@/octgpr/' octave-forge-prerm
	chmod a+x octave-forge*
/bin/rm -f /sw/build.build/root-octgpr-atlas-oct364-1.2.0-9/sw/info/dir /sw/build.build/root-octgpr-atlas-oct364-1.2.0-9/sw/info/dir.old /sw/build.build/root-octgpr-atlas-oct364-1.2.0-9/sw/share/info/dir /sw/build.build/root-octgpr-atlas-oct364-1.2.0-9/sw/share/info/dir.old
Writing control file...
Writing package script postinst...
Writing package script prerm...
Writing md5sums file...
env LANG=C LC_ALL=C dpkg-deb -b root-octgpr-atlas-oct364-1.2.0-9 /sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/octmods
dpkg-deb: building package `octgpr-atlas-oct364' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/octmods/octgpr-atlas-oct364_1.2.0-9_darwin-x86_64.deb'.
Removing runtime build-lock...
Removing build-lock package...
/sw/bin/dpkg-lockwait -r fink-buildlock-octgpr-atlas-oct364-1.2.0-9
(Reading database ... 16953 files and directories currently installed.)
Removing fink-buildlock-octgpr-atlas-oct364-1.2.0-9 ...