printf ' ' | fink --no-use-binary-dist --yes --build-as-nobody rebuild pytables-py27 2>&1 The package 'pytables-py27' will be built without being installed. Reading build dependency for pytables-py27-3.1.1-1... Reading dependency for pytables-py27-3.1.1-1... Reading build conflict for pytables-py27-3.1.1-1... The package 'bzip2-dev' will be installed. Reading dependency for bzip2-dev-1.0.6-1... Reading runtime dependency for bzip2-dev-1.0.6-1... The package 'lzo2' will be installed. Reading dependency for lzo2-2.08-2... Reading runtime dependency for lzo2-2.08-2... The package 'cython-py27' will be installed. Reading dependency for cython-py27-0.20.2-1... Reading runtime dependency for cython-py27-0.20.2-1... The package 'hdf5.8' will be installed. Reading dependency for hdf5.8-1.8.13-1... Reading runtime dependency for hdf5.8-1.8.13-1... The package 'python27' will be installed. Reading dependency for python27-2.7.8-1... Reading runtime dependency for python27-2.7.8-1... The package 'numpy-py27' will be installed. Reading dependency for numpy-py27-1.8.1-1... Reading runtime dependency for numpy-py27-1.8.1-1... The package 'numexpr-py27' will be installed. Reading dependency for numexpr-py27-2.4-1... Reading runtime dependency for numexpr-py27-2.4-1... The package 'lzo2-shlibs' will be installed. Reading dependency for lzo2-shlibs-2.08-2... Reading runtime dependency for lzo2-shlibs-2.08-2... The package 'hdf5.8-shlibs' will be installed. Reading dependency for hdf5.8-shlibs-1.8.13-1... Reading runtime dependency for hdf5.8-shlibs-1.8.13-1... The package 'hdf5.8-bin' will be installed. Reading dependency for hdf5.8-bin-1.8.13-1... Reading runtime dependency for hdf5.8-bin-1.8.13-1... The package 'szip-shlibs' will be installed. Reading dependency for szip-shlibs-2.1-3... Reading runtime dependency for szip-shlibs-2.1-3... The package 'python27-shlibs' will be installed. Reading dependency for python27-shlibs-2.7.8-1... Reading runtime dependency for python27-shlibs-2.7.8-1... The package 'blt-shlibs' will be installed. Reading dependency for blt-shlibs-2.4z-160... Reading runtime dependency for blt-shlibs-2.4z-160... The package 'db53-aes-shlibs' will be installed. Reading dependency for db53-aes-shlibs-5.3.21-2... Reading runtime dependency for db53-aes-shlibs-5.3.21-2... The package 'expat1-shlibs' will be installed. Reading dependency for expat1-shlibs-2.1.0-1... Reading runtime dependency for expat1-shlibs-2.1.0-1... The package 'gdbm3-shlibs' will be installed. Reading dependency for gdbm3-shlibs-1.8.3-4... Reading runtime dependency for gdbm3-shlibs-1.8.3-4... The package 'libffi6-shlibs' will be installed. Reading dependency for libffi6-shlibs-3.1-1... Reading runtime dependency for libffi6-shlibs-3.1-1... The package 'libncursesw5-shlibs' will be installed. Reading dependency for libncursesw5-shlibs-5.9-20110507-1... Reading runtime dependency for libncursesw5-shlibs-5.9-20110507-1... The package 'openssl100-shlibs' will be installed. Reading dependency for openssl100-shlibs-1.0.1h-1... Reading runtime dependency for openssl100-shlibs-1.0.1h-1... The package 'readline6-shlibs' will be installed. Reading dependency for readline6-shlibs-6.3.6-1... Reading runtime dependency for readline6-shlibs-6.3.6-1... The package 'sqlite3-shlibs' will be installed. Reading dependency for sqlite3-shlibs-3.8.3.1-1... Reading runtime dependency for sqlite3-shlibs-3.8.3.1-1... The package 'tcltk' will be installed. Reading dependency for tcltk-8.6.1-104... Reading runtime dependency for tcltk-8.6.1-104... The package 'nose-py27' will be installed. Reading dependency for nose-py27-1.3.0-1... Reading runtime dependency for nose-py27-1.3.0-1... The package 'libjpeg9-shlibs' will be installed. Reading dependency for libjpeg9-shlibs-9a-1... Reading runtime dependency for libjpeg9-shlibs-9a-1... The package 'tcltk-shlibs' will be installed. Reading dependency for tcltk-shlibs-8.6.1-104... Reading runtime dependency for tcltk-shlibs-8.6.1-104... The package 'fontconfig2-shlibs' will be installed. Reading dependency for fontconfig2-shlibs-2.10.2-1... Reading runtime dependency for fontconfig2-shlibs-2.10.2-1... The package 'freetype219-shlibs' will be installed. Reading dependency for freetype219-shlibs-2.4.12-1... Reading runtime dependency for freetype219-shlibs-2.4.12-1... The package 'xft2-shlibs' will be installed. Reading dependency for xft2-shlibs-2.2.0-3... Reading runtime dependency for xft2-shlibs-2.2.0-3... The package 'setuptools-tng-py27' will be installed. Reading dependency for setuptools-tng-py27-5.1-1... Reading runtime dependency for setuptools-tng-py27-5.1-1... The package 'fontconfig-config' will be installed. Reading dependency for fontconfig-config-2.10.2-1... Reading runtime dependency for fontconfig-config-2.10.2-1... The following package will be rebuilt: pytables-py27 The following 30 additional packages will be installed: blt-shlibs bzip2-dev cython-py27 db53-aes-shlibs expat1-shlibs fontconfig-config fontconfig2-shlibs freetype219-shlibs gdbm3-shlibs hdf5.8 hdf5.8-bin hdf5.8-shlibs libffi6-shlibs libjpeg9-shlibs libncursesw5-shlibs lzo2 lzo2-shlibs nose-py27 numexpr-py27 numpy-py27 openssl100-shlibs python27 python27-shlibs readline6-shlibs setuptools-tng-py27 sqlite3-shlibs szip-shlibs tcltk tcltk-shlibs xft2-shlibs Do you want to continue? [Y/n] (assuming default) Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/base/bzip2-dev_1.0.6-1_darwin-x86_64.deb Selecting previously deselected package bzip2-dev. (Reading database ... 4296 files and directories currently installed.) Unpacking bzip2-dev (from .../bzip2-dev_1.0.6-1_darwin-x86_64.deb) ... Setting up bzip2-dev (1.0.6-1) ... Reading buildlock packages... 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All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/nose-py27_1.3.0-1_darwin-x86_64.deb Selecting previously deselected package nose-py27. (Reading database ... 13057 files and directories currently installed.) Unpacking nose-py27 (from .../nose-py27_1.3.0-1_darwin-x86_64.deb) ... Setting up nose-py27 (1.3.0-1) ... Checking available versions of nosetests, updating links in /sw/etc/alternatives ... (You may modify the symlinks there yourself if desired - see `man ln'.) Updating nosetests (/sw/bin/nosetests) to point to /sw/bin/nosetests2.7. Updating nosetests.1 (/sw/share/man/man1/nosetests.1) to point to /sw//share/man/man1/nosetests-py27.1. Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/numpy-py27_1.8.1-1_darwin-x86_64.deb Selecting previously deselected package numpy-py27. (Reading database ... 13242 files and directories currently installed.) Unpacking numpy-py27 (from .../numpy-py27_1.8.1-1_darwin-x86_64.deb) ... Setting up numpy-py27 (1.8.1-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/numexpr-py27_2.4-1_darwin-x86_64.deb Selecting previously deselected package numexpr-py27. (Reading database ... 14020 files and directories currently installed.) Unpacking numexpr-py27 (from .../numexpr-py27_2.4-1_darwin-x86_64.deb) ... Setting up numexpr-py27 (2.4-1) ... Setting runtime build-lock... dpkg-deb -b /sw/build.build/root-fink-buildlock-pytables-py27-3.1.1-1 /sw/build.build dpkg-deb: building package `fink-buildlock-pytables-py27-3.1.1-1' in `/sw/build.build/fink-buildlock-pytables-py27-3.1.1-1_2014.07.29-06.43.26_darwin-x86_64.deb'. Installing build-lock package... /sw/bin/dpkg-lockwait -i /sw/build.build/fink-buildlock-pytables-py27-3.1.1-1_2014.07.29-06.43.26_darwin-x86_64.deb Selecting previously deselected package fink-buildlock-pytables-py27-3.1.1-1. 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Setting up fink-buildlock-pytables-py27-3.1.1-1 (2014.07.29-06.43.26) ... sudo -u fink-bld [ENV] sh -c /tmp/fink.girqW env LANG=C LC_ALL=C /sw/bin/tar --no-same-owner --no-same-permissions -xvf /sw/src/tables-3.1.1.tar.gz tables-3.1.1/ tables-3.1.1/LICENSES/ tables-3.1.1/LICENSES/FASTLZ.txt tables-3.1.1/LICENSES/STDINT.txt tables-3.1.1/LICENSES/WIN32PTHREADS.txt tables-3.1.1/LICENSES/LZ4.txt tables-3.1.1/LICENSES/HDF5.txt tables-3.1.1/LICENSES/SNAPPY.txt tables-3.1.1/LICENSES/CLOUD-SPTHEME.txt tables-3.1.1/LICENSES/ZLIB.txt tables-3.1.1/LICENSES/BLOSC.txt tables-3.1.1/LICENSES/H5PY.txt tables-3.1.1/README.txt tables-3.1.1/PKG-INFO tables-3.1.1/requirements.txt tables-3.1.1/THANKS tables-3.1.1/utils/ tables-3.1.1/utils/ptdump tables-3.1.1/utils/ptrepack tables-3.1.1/utils/pt2to3 tables-3.1.1/VERSION tables-3.1.1/RELEASE_NOTES.txt tables-3.1.1/src/ tables-3.1.1/src/tables.h tables-3.1.1/src/H5Zbzip2.h tables-3.1.1/src/idx-opt.h tables-3.1.1/src/H5ARRAY.c tables-3.1.1/src/version.h 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tables-3.1.1/tables/nodes/tests/ tables-3.1.1/tables/nodes/tests/test_filenode.xbm tables-3.1.1/tables/nodes/tests/__init__.py tables-3.1.1/tables/nodes/tests/test_filenode_v1.h5 tables-3.1.1/tables/nodes/tests/test_filenode.dat tables-3.1.1/tables/nodes/tests/test_filenode.py tables-3.1.1/tables/nodes/__init__.py tables-3.1.1/tables/nodes/filenode.py tables-3.1.1/tables/idxutils.py tables-3.1.1/tables/group.py tables-3.1.1/tables/link.py tables-3.1.1/tables/hdf5extension.c tables-3.1.1/tables/atom.py tables-3.1.1/tables/req_versions.py tables-3.1.1/setup.cfg sudo -u fink-bld [ENV] sh -c /tmp/fink.T7qtI sed -i.bak -e 's|"python"|sys.executable|' setup.py sudo -u fink-bld [ENV] sh -c /tmp/fink.tTNaw /sw/bin/python2.7 setup.py build_ext --cflags='-I/sw/include' --lflags='-L/sw/lib' --hdf5=/sw/ --lzo=/sw/ --bzip2=/sw/ /private/tmp/blosc_list_compressorslveWzH.c:1:1: warning: type specifier missing, defaults to 'int' [-Wimplicit-int] main (int argc, char **argv) { ^~~~ /private/tmp/blosc_list_compressorslveWzH.c:2:5: warning: implicit declaration of function 'blosc_list_compressors' is invalid in C99 [-Wimplicit-function-declaration] blosc_list_compressors(); ^ 2 warnings generated. ld: library not found for -lblosc clang: error: linker command failed with exit code 1 (use -v to see invocation) * Using Python 2.7.8 (default, Jul 24 2014, 21:48:53) * Found numpy 1.8.1 package installed. * Found numexpr 2.4 package installed. * Found Cython 0.20.2 package installed. * Found HDF5 headers at ``/sw/include``, library at ``/sw/lib``. .. WARNING:: Could not find the HDF5 runtime. The HDF5 shared library was *not* found in the default library paths. In case of runtime problems, please remember to install it. * Found LZO 2 headers at ``/sw/include``, library at ``/sw/lib``. .. WARNING:: Could not find the LZO 2 runtime. The LZO 2 shared library was *not* found in the default library paths. In case of runtime problems, please remember to install it. * Skipping detection of LZO 1 since LZO 2 has already been found. * Found bzip2 headers at ``/sw/include``, library at ``/sw/lib``. ld: library not found for -lblosc clang: error: linker command failed with exit code 1 (use -v to see invocation) * Could not find blosc headers and library; using internal sources. Setting compiler flag '-msse2' running build_ext building 'tables.utilsextension' extension C compiler: gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -fwrapv -O3 -Wall -Wstrict-prototypes -I/sw/include creating build creating build/temp.macosx-10.9-x86_64-2.7 creating build/temp.macosx-10.9-x86_64-2.7/tables creating build/temp.macosx-10.9-x86_64-2.7/src creating build/temp.macosx-10.9-x86_64-2.7/c-blosc creating build/temp.macosx-10.9-x86_64-2.7/c-blosc/hdf5 creating build/temp.macosx-10.9-x86_64-2.7/c-blosc/blosc creating build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs creating build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/lz4-r113 creating build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/snappy-1.1.1 creating build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8 compile options: '-DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_LZ4=1 -DHAVE_SNAPPY=1 -DHAVE_ZLIB=1 -Ic-blosc/hdf5 -I/sw/lib/python2.7/site-packages/numpy/core/include -I/sw/include -I/usr/local/include -I/sw/include -I/opt/include -I/opt/local/include -I/usr/include -I/include -Ic-blosc/blosc -Ic-blosc/internal-complibs/lz4-r113 -Ic-blosc/internal-complibs/snappy-1.1.1 -Ic-blosc/internal-complibs/zlib-1.2.8 -I/sw/include/python2.7 -c' extra options: '-I/sw/include -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 -DH5_NO_DEPRECATED_SYMBOLS -msse2' gcc: tables/utilsextension.c In file included from tables/utilsextension.c:315: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ tables/utilsextension.c:2867:57: warning: incompatible pointer types passing 'herr_t (unsigned int, H5E_error2_t *, void *)' to parameter of type 'H5E_walk2_t' (aka 'herr_t (*)(unsigned int, const H5E_error2_t *, void *)') [-Wincompatible-pointer-types] __pyx_t_2 = ((H5Ewalk(H5E_DEFAULT, H5E_WALK_DOWNWARD, __pyx_f_6tables_14utilsextension_e_walk_cb, ((void *)__pyx_v_bt)) < 0) != 0); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/include/H5Epublic.h:171:80: note: passing argument to parameter 'func' here H5_DLL herr_t H5Ewalk2(hid_t err_stack, H5E_direction_t direction, H5E_walk2_t func, ^ tables/utilsextension.c:3593:11: warning: 10 enumeration values not handled in switch: 'H5T_NO_CLASS', 'H5T_INTEGER', 'H5T_FLOAT'... [-Wswitch] switch (__pyx_v_class_id) { ^ tables/utilsextension.c:5657:11: warning: 4 enumeration values not handled in switch: 'H5T_NO_CLASS', 'H5T_OPAQUE', 'H5T_REFERENCE'... [-Wswitch] switch (__pyx_v_class_id) { ^ tables/utilsextension.c:6750:140: warning: comparison of unsigned expression < 0 is always false [-Wtautological-compare] __pyx_t_2 = ((getIndicesExt(__pyx_v_s, __pyx_v_length, (&__pyx_v_o_start), (&__pyx_v_o_stop), (&__pyx_v_o_step), (&__pyx_v_slicelength)) < 0) != 0); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ^ ~ In file included from tables/utilsextension.c:316: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ufuncobject.h:327: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/__ufunc_api.h:241:1: warning: unused function '_import_umath' [-Wunused-function] _import_umath(void) ^ tables/utilsextension.c:20025:32: warning: unused function '__Pyx_PyUnicode_FromString' [-Wunused-function] static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(char* c_str) { ^ tables/utilsextension.c:373:29: warning: unused function '__Pyx_Py_UNICODE_strlen' [-Wunused-function] static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) ^ tables/utilsextension.c:17821:32: warning: unused function '__Pyx_GetItemInt_List_Fast' [-Wunused-function] static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, ^ tables/utilsextension.c:18908:48: warning: unused function '__pyx_t_float_complex_from_parts' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { ^ tables/utilsextension.c:18918:30: warning: unused function '__Pyx_c_eqf' [-Wunused-function] static CYTHON_INLINE int __Pyx_c_eqf(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/utilsextension.c:18921:48: warning: unused function '__Pyx_c_sumf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sumf(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/utilsextension.c:18927:48: warning: unused function '__Pyx_c_difff' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_difff(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/utilsextension.c:18939:48: warning: unused function '__Pyx_c_quotf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quotf(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/utilsextension.c:18946:48: warning: unused function '__Pyx_c_negf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_negf(__pyx_t_float_complex a) { ^ tables/utilsextension.c:18952:30: warning: unused function '__Pyx_c_is_zerof' [-Wunused-function] static CYTHON_INLINE int __Pyx_c_is_zerof(__pyx_t_float_complex a) { ^ tables/utilsextension.c:18955:48: warning: unused function '__Pyx_c_conjf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conjf(__pyx_t_float_complex a) { ^ tables/utilsextension.c:18969:52: warning: unused function '__Pyx_c_powf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_powf(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/utilsextension.c:19028:49: warning: unused function '__pyx_t_double_complex_from_parts' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { ^ tables/utilsextension.c:19038:30: warning: unused function '__Pyx_c_eq' [-Wunused-function] static CYTHON_INLINE int __Pyx_c_eq(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/utilsextension.c:19041:49: warning: unused function '__Pyx_c_sum' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/utilsextension.c:19047:49: warning: unused function '__Pyx_c_diff' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/utilsextension.c:19059:49: warning: unused function '__Pyx_c_quot' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/utilsextension.c:19066:49: warning: unused function '__Pyx_c_neg' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg(__pyx_t_double_complex a) { ^ tables/utilsextension.c:19072:30: warning: unused function '__Pyx_c_is_zero' [-Wunused-function] static CYTHON_INLINE int __Pyx_c_is_zero(__pyx_t_double_complex a) { ^ tables/utilsextension.c:19075:49: warning: unused function '__Pyx_c_conj' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj(__pyx_t_double_complex a) { ^ tables/utilsextension.c:19089:53: warning: unused function '__Pyx_c_pow' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/utilsextension.c:19194:27: warning: unused function '__Pyx_PyInt_AsChar' [-Wunused-function] static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) { ^ tables/utilsextension.c:19213:28: warning: unused function '__Pyx_PyInt_AsShort' [-Wunused-function] static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) { ^ tables/utilsextension.c:19308:26: warning: unused function '__Pyx_PyInt_AsLongDouble' [-Wunused-function] static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) { ^ tables/utilsextension.c:19515:35: warning: function '__Pyx_PyInt_AsLongLong' is not needed and will not be emitted [-Wunneeded-internal-declaration] static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) { ^ tables/utilsextension.c:12313:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew1' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew1(PyObject *__pyx_v_a) { ^ tables/utilsextension.c:12356:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew2' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew2(PyObject *__pyx_v_a, PyObject *__pyx_v_b) { ^ tables/utilsextension.c:12399:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew3' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew3(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c) { ^ tables/utilsextension.c:12442:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew4' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew4(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c, PyObject *__pyx_v_d) { ^ tables/utilsextension.c:12485:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew5' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew5(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c, PyObject *__pyx_v_d, PyObject *__pyx_v_e) { ^ tables/utilsextension.c:13265:27: warning: unused function '__pyx_f_5numpy_set_array_base' [-Wunused-function] static CYTHON_INLINE void __pyx_f_5numpy_set_array_base(PyArrayObject *__pyx_v_arr, PyObject *__pyx_v_base) { ^ tables/utilsextension.c:13344:32: warning: unused function '__pyx_f_5numpy_get_array_base' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__pyx_v_arr) { ^ tables/utilsextension.c:13402:27: warning: unused function '__pyx_f_7cpython_8datetime_import_datetime' [-Wunused-function] static CYTHON_INLINE void __pyx_f_7cpython_8datetime_import_datetime(void) { ^ tables/utilsextension.c:13426:32: warning: unused function '__pyx_f_7cpython_8datetime_date_new' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_7cpython_8datetime_date_new(int __pyx_v_year, int __pyx_v_month, int __pyx_v_day) { ^ tables/utilsextension.c:13469:32: warning: unused function '__pyx_f_7cpython_8datetime_time_new' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_7cpython_8datetime_time_new(int __pyx_v_hour, int __pyx_v_minute, int __pyx_v_second, int __pyx_v_microsecond, PyObject *__pyx_v_tz) { ^ tables/utilsextension.c:13512:32: warning: unused function '__pyx_f_7cpython_8datetime_datetime_new' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_7cpython_8datetime_datetime_new(int __pyx_v_year, int __pyx_v_month, int __pyx_v_day, int __pyx_v_hour, int __pyx_v_minute, int __pyx_v_second, int __pyx_v_microsecond, PyObject *__pyx_v_tz) { ^ tables/utilsextension.c:13555:32: warning: unused function '__pyx_f_7cpython_8datetime_timedelta_new' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_7cpython_8datetime_timedelta_new(int __pyx_v_days, int __pyx_v_seconds, int __pyx_v_useconds) { ^ tables/utilsextension.c:13598:32: warning: unused function '__pyx_f_7cpython_8datetime_time_tzinfo' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_7cpython_8datetime_time_tzinfo(PyObject *__pyx_v_o) { ^ tables/utilsextension.c:13658:32: warning: unused function '__pyx_f_7cpython_8datetime_datetime_tzinfo' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_7cpython_8datetime_datetime_tzinfo(PyObject *__pyx_v_o) { ^ tables/utilsextension.c:13718:26: warning: unused function '__pyx_f_7cpython_8datetime_date_year' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_date_year(PyObject *__pyx_v_o) { ^ tables/utilsextension.c:13747:26: warning: unused function '__pyx_f_7cpython_8datetime_date_month' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_date_month(PyObject *__pyx_v_o) { ^ tables/utilsextension.c:13776:26: warning: unused function '__pyx_f_7cpython_8datetime_date_day' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_date_day(PyObject *__pyx_v_o) { ^ tables/utilsextension.c:13805:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_year' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_year(PyObject *__pyx_v_o) { ^ tables/utilsextension.c:13834:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_month' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_month(PyObject *__pyx_v_o) { ^ tables/utilsextension.c:13863:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_day' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_day(PyObject *__pyx_v_o) { ^ tables/utilsextension.c:13892:26: warning: unused function '__pyx_f_7cpython_8datetime_time_hour' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_time_hour(PyObject *__pyx_v_o) { ^ tables/utilsextension.c:13921:26: warning: unused function '__pyx_f_7cpython_8datetime_time_minute' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_time_minute(PyObject *__pyx_v_o) { ^ tables/utilsextension.c:13950:26: warning: unused function '__pyx_f_7cpython_8datetime_time_second' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_time_second(PyObject *__pyx_v_o) { ^ tables/utilsextension.c:13979:26: warning: unused function '__pyx_f_7cpython_8datetime_time_microsecond' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_time_microsecond(PyObject *__pyx_v_o) { ^ tables/utilsextension.c:14008:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_hour' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_hour(PyObject *__pyx_v_o) { ^ tables/utilsextension.c:14037:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_minute' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_minute(PyObject *__pyx_v_o) { ^ tables/utilsextension.c:14066:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_second' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_second(PyObject *__pyx_v_o) { ^ tables/utilsextension.c:14095:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_microsecond' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_microsecond(PyObject *__pyx_v_o) { ^ tables/utilsextension.c:14124:26: warning: unused function '__pyx_f_7cpython_8datetime_timedelta_days' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_timedelta_days(PyObject *__pyx_v_o) { ^ tables/utilsextension.c:14153:26: warning: unused function '__pyx_f_7cpython_8datetime_timedelta_seconds' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_timedelta_seconds(PyObject *__pyx_v_o) { ^ tables/utilsextension.c:14181:26: warning: unused function '__pyx_f_7cpython_8datetime_timedelta_microseconds' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_timedelta_microseconds(PyObject *__pyx_v_o) { ^ 62 warnings generated. gcc: c-blosc/internal-complibs/zlib-1.2.8/gzread.c c-blosc/internal-complibs/zlib-1.2.8/gzread.c:30:15: warning: implicit declaration of function 'read' is invalid in C99 [-Wimplicit-function-declaration] ret = read(state->fd, buf + *have, len - *have); ^ c-blosc/internal-complibs/zlib-1.2.8/gzread.c:591:11: warning: implicit declaration of function 'close' is invalid in C99 [-Wimplicit-function-declaration] ret = close(state->fd); ^ 2 warnings generated. gcc: c-blosc/internal-complibs/snappy-1.1.1/snappy.cc gcc: c-blosc/internal-complibs/zlib-1.2.8/deflate.c gcc: c-blosc/blosc/blosclz.c gcc: c-blosc/internal-complibs/zlib-1.2.8/adler32.c gcc: c-blosc/internal-complibs/zlib-1.2.8/inffast.c gcc: c-blosc/internal-complibs/snappy-1.1.1/snappy-c.cc gcc: c-blosc/internal-complibs/zlib-1.2.8/compress.c gcc: c-blosc/blosc/blosc.c gcc: c-blosc/blosc/shuffle.c gcc: c-blosc/internal-complibs/zlib-1.2.8/inftrees.c gcc: c-blosc/internal-complibs/snappy-1.1.1/snappy-stubs-internal.cc gcc: c-blosc/internal-complibs/zlib-1.2.8/crc32.c gcc: src/H5ARRAY.c In file included from src/H5ARRAY.c:4: In file included from src/utils.h:2: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from src/H5ARRAY.c:4: In file included from src/utils.h:2: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:26: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1629:1: warning: unused function '_import_array' [-Wunused-function] _import_array(void) ^ 2 warnings generated. gcc: c-blosc/internal-complibs/zlib-1.2.8/gzwrite.c c-blosc/internal-complibs/zlib-1.2.8/gzwrite.c:84:15: warning: implicit declaration of function 'write' is invalid in C99 [-Wimplicit-function-declaration] got = write(state->fd, strm->next_in, strm->avail_in); ^ c-blosc/internal-complibs/zlib-1.2.8/gzwrite.c:573:9: warning: implicit declaration of function 'close' is invalid in C99 [-Wimplicit-function-declaration] if (close(state->fd) == -1) ^ 2 warnings generated. gcc: c-blosc/internal-complibs/lz4-r113/lz4hc.c gcc: c-blosc/hdf5/blosc_filter.c gcc: c-blosc/internal-complibs/zlib-1.2.8/gzlib.c c-blosc/internal-complibs/zlib-1.2.8/gzlib.c:256:24: warning: implicit declaration of function 'lseek' is invalid in C99 [-Wimplicit-function-declaration] state->start = LSEEK(state->fd, 0, SEEK_CUR); ^ c-blosc/internal-complibs/zlib-1.2.8/gzlib.c:14:17: note: expanded from macro 'LSEEK' # define LSEEK lseek ^ 1 warning generated. gcc: c-blosc/internal-complibs/zlib-1.2.8/gzclose.c gcc: c-blosc/internal-complibs/lz4-r113/lz4.c gcc: c-blosc/internal-complibs/zlib-1.2.8/trees.c gcc: src/H5ATTR.c src/H5ATTR.c:271:47: warning: comparison of unsigned expression < 0 is always false [-Wtautological-compare] if ( (type_size = H5Tget_size( attr_type )) < 0 ) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ^ ~ src/H5ATTR.c:436:8: warning: explicitly assigning a variable of type 'hid_t' (aka 'int') to itself [-Wself-assign] loc_id=loc_id; ~~~~~~^~~~~~~ 2 warnings generated. gcc: c-blosc/internal-complibs/zlib-1.2.8/inflate.c gcc: c-blosc/internal-complibs/snappy-1.1.1/snappy-sinksource.cc gcc: c-blosc/internal-complibs/zlib-1.2.8/infback.c gcc: src/utils.c In file included from src/utils.c:2: In file included from src/utils.h:2: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from src/utils.c:2: In file included from src/utils.h:2: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:26: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1629:1: warning: unused function '_import_array' [-Wunused-function] _import_array(void) ^ 2 warnings generated. gcc: c-blosc/internal-complibs/zlib-1.2.8/zutil.c gcc: c-blosc/internal-complibs/zlib-1.2.8/uncompr.c creating build/lib.macosx-10.9-x86_64-2.7 creating build/lib.macosx-10.9-x86_64-2.7/tables g++ -L/sw/lib -bundle -L/sw/lib/python2.7/config -lpython2.7 -L/sw/lib -L/sw/lib -I/sw/include build/temp.macosx-10.9-x86_64-2.7/tables/utilsextension.o build/temp.macosx-10.9-x86_64-2.7/src/utils.o build/temp.macosx-10.9-x86_64-2.7/src/H5ARRAY.o build/temp.macosx-10.9-x86_64-2.7/src/H5ATTR.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/hdf5/blosc_filter.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/blosc/blosc.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/blosc/blosclz.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/blosc/shuffle.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/lz4-r113/lz4.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/lz4-r113/lz4hc.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/snappy-1.1.1/snappy-c.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/snappy-1.1.1/snappy-sinksource.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/snappy-1.1.1/snappy-stubs-internal.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/snappy-1.1.1/snappy.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/adler32.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/compress.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/crc32.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/deflate.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/gzclose.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/gzlib.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/gzread.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/gzwrite.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/infback.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/inffast.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/inflate.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/inftrees.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/trees.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/uncompr.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/zutil.o -L/sw/lib -L/usr/local/lib64 -L/usr/local/lib -L/sw/lib64 -L/sw/lib -L/opt/lib64 -L/opt/lib -L/opt/local/lib64 -L/opt/local/lib -L/usr/lib64 -L/usr/lib -L/lib64 -L/lib -L/sw/lib -lhdf5 -o build/lib.macosx-10.9-x86_64-2.7/tables/utilsextension.so -L/sw/lib ld: warning: directory not found for option '-L/usr/local/lib64' ld: warning: directory not found for option '-L/usr/local/lib' ld: warning: directory not found for option '-L/sw/lib64' ld: warning: directory not found for option '-L/opt/lib64' ld: warning: directory not found for option '-L/opt/lib' ld: warning: directory not found for option '-L/opt/local/lib64' ld: warning: directory not found for option '-L/opt/local/lib' ld: warning: directory not found for option '-L/usr/lib64' ld: warning: directory not found for option '-L/lib64' ld: warning: directory not found for option '-L/lib' building 'tables.hdf5extension' extension C compiler: gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -fwrapv -O3 -Wall -Wstrict-prototypes -I/sw/include compile options: '-DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_LZ4=1 -DHAVE_SNAPPY=1 -DHAVE_ZLIB=1 -Ic-blosc/hdf5 -I/sw/lib/python2.7/site-packages/numpy/core/include -I/sw/include -I/usr/local/include -I/sw/include -I/opt/include -I/opt/local/include -I/usr/include -I/include -Ic-blosc/blosc -Ic-blosc/internal-complibs/lz4-r113 -Ic-blosc/internal-complibs/snappy-1.1.1 -Ic-blosc/internal-complibs/zlib-1.2.8 -I/sw/include/python2.7 -c' extra options: '-I/sw/include -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 -DH5_NO_DEPRECATED_SYMBOLS -msse2' gcc: c-blosc/internal-complibs/snappy-1.1.1/snappy.cc gcc: src/H5VLARRAY.c In file included from src/H5VLARRAY.c:3: In file included from src/utils.h:2: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from src/H5VLARRAY.c:3: In file included from src/utils.h:2: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:26: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1629:1: warning: unused function '_import_array' [-Wunused-function] _import_array(void) ^ 2 warnings generated. gcc: c-blosc/internal-complibs/zlib-1.2.8/gzread.c c-blosc/internal-complibs/zlib-1.2.8/gzread.c:30:15: warning: implicit declaration of function 'read' is invalid in C99 [-Wimplicit-function-declaration] ret = read(state->fd, buf + *have, len - *have); ^ c-blosc/internal-complibs/zlib-1.2.8/gzread.c:591:11: warning: implicit declaration of function 'close' is invalid in C99 [-Wimplicit-function-declaration] ret = close(state->fd); ^ 2 warnings generated. gcc: c-blosc/internal-complibs/zlib-1.2.8/deflate.c gcc: c-blosc/blosc/blosclz.c gcc: c-blosc/internal-complibs/zlib-1.2.8/adler32.c gcc: c-blosc/internal-complibs/zlib-1.2.8/inffast.c gcc: c-blosc/internal-complibs/snappy-1.1.1/snappy-c.cc gcc: c-blosc/internal-complibs/zlib-1.2.8/compress.c gcc: c-blosc/blosc/blosc.c gcc: c-blosc/blosc/shuffle.c gcc: c-blosc/internal-complibs/zlib-1.2.8/inftrees.c gcc: c-blosc/internal-complibs/snappy-1.1.1/snappy-stubs-internal.cc gcc: c-blosc/internal-complibs/zlib-1.2.8/crc32.c gcc: src/H5ARRAY.c In file included from src/H5ARRAY.c:4: In file included from src/utils.h:2: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from src/H5ARRAY.c:4: In file included from src/utils.h:2: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:26: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1629:1: warning: unused function '_import_array' [-Wunused-function] _import_array(void) ^ 2 warnings generated. gcc: src/typeconv.c gcc: c-blosc/internal-complibs/zlib-1.2.8/gzwrite.c c-blosc/internal-complibs/zlib-1.2.8/gzwrite.c:84:15: warning: implicit declaration of function 'write' is invalid in C99 [-Wimplicit-function-declaration] got = write(state->fd, strm->next_in, strm->avail_in); ^ c-blosc/internal-complibs/zlib-1.2.8/gzwrite.c:573:9: warning: implicit declaration of function 'close' is invalid in C99 [-Wimplicit-function-declaration] if (close(state->fd) == -1) ^ 2 warnings generated. gcc: c-blosc/internal-complibs/lz4-r113/lz4hc.c gcc: c-blosc/hdf5/blosc_filter.c gcc: src/H5ARRAY-opt.c gcc: c-blosc/internal-complibs/zlib-1.2.8/gzlib.c c-blosc/internal-complibs/zlib-1.2.8/gzlib.c:256:24: warning: implicit declaration of function 'lseek' is invalid in C99 [-Wimplicit-function-declaration] state->start = LSEEK(state->fd, 0, SEEK_CUR); ^ c-blosc/internal-complibs/zlib-1.2.8/gzlib.c:14:17: note: expanded from macro 'LSEEK' # define LSEEK lseek ^ 1 warning generated. gcc: c-blosc/internal-complibs/zlib-1.2.8/gzclose.c gcc: c-blosc/internal-complibs/lz4-r113/lz4.c gcc: c-blosc/internal-complibs/zlib-1.2.8/trees.c gcc: src/H5ATTR.c src/H5ATTR.c:271:47: warning: comparison of unsigned expression < 0 is always false [-Wtautological-compare] if ( (type_size = H5Tget_size( attr_type )) < 0 ) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ^ ~ src/H5ATTR.c:436:8: warning: explicitly assigning a variable of type 'hid_t' (aka 'int') to itself [-Wself-assign] loc_id=loc_id; ~~~~~~^~~~~~~ 2 warnings generated. gcc: c-blosc/internal-complibs/zlib-1.2.8/inflate.c gcc: c-blosc/internal-complibs/snappy-1.1.1/snappy-sinksource.cc gcc: c-blosc/internal-complibs/zlib-1.2.8/infback.c gcc: src/utils.c In file included from src/utils.c:2: In file included from src/utils.h:2: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from src/utils.c:2: In file included from src/utils.h:2: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:26: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1629:1: warning: unused function '_import_array' [-Wunused-function] _import_array(void) ^ 2 warnings generated. gcc: tables/hdf5extension.c In file included from tables/hdf5extension.c:314: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ tables/hdf5extension.c:2776:11: warning: 9 enumeration values not handled in switch: 'H5T_NO_CLASS', 'H5T_TIME', 'H5T_OPAQUE'... [-Wswitch] switch (__pyx_v_class_id) { ^ tables/hdf5extension.c:3999:29: warning: explicitly assigning a variable of type 'size_t' (aka 'unsigned long') to itself [-Wself-assign] __pyx_v_user_block_size = __pyx_v_user_block_size; ~~~~~~~~~~~~~~~~~~~~~~~ ^ ~~~~~~~~~~~~~~~~~~~~~~~ tables/hdf5extension.c:10745:29: warning: comparison of unsigned expression < 0 is always false [-Wtautological-compare] __pyx_t_3 = ((__pyx_v_ret < 0) != 0); ~~~~~~~~~~~ ^ ~ tables/hdf5extension.c:25621:31: warning: comparison of unsigned expression < 0 is always false [-Wtautological-compare] q -= ((r != 0) & ((r ^ b) < 0)); ~~~~~~~ ^ ~ In file included from tables/hdf5extension.c:315: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ufuncobject.h:327: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/__ufunc_api.h:241:1: warning: unused function '_import_umath' [-Wunused-function] _import_umath(void) ^ tables/hdf5extension.c:27391:32: warning: unused function '__Pyx_PyUnicode_FromString' [-Wunused-function] static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(char* c_str) { ^ tables/hdf5extension.c:373:29: warning: unused function '__Pyx_Py_UNICODE_strlen' [-Wunused-function] static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) ^ tables/hdf5extension.c:25157:27: warning: unused function '__Pyx_ErrFetch' [-Wunused-function] static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) { ^ tables/hdf5extension.c:25749:32: warning: unused function '__Pyx_GetItemInt_List_Fast' [-Wunused-function] static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, ^ tables/hdf5extension.c:25763:32: warning: unused function '__Pyx_GetItemInt_Tuple_Fast' [-Wunused-function] static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, ^ tables/hdf5extension.c:26221:32: warning: unused function '__Pyx_PyInt_to_py_htri_t' [-Wunused-function] static CYTHON_INLINE PyObject *__Pyx_PyInt_to_py_htri_t(htri_t val) { ^ tables/hdf5extension.c:26257:48: warning: unused function '__pyx_t_float_complex_from_parts' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { ^ tables/hdf5extension.c:26267:30: warning: unused function '__Pyx_c_eqf' [-Wunused-function] static CYTHON_INLINE int __Pyx_c_eqf(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/hdf5extension.c:26270:48: warning: unused function '__Pyx_c_sumf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sumf(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/hdf5extension.c:26276:48: warning: unused function '__Pyx_c_difff' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_difff(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/hdf5extension.c:26288:48: warning: unused function '__Pyx_c_quotf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quotf(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/hdf5extension.c:26295:48: warning: unused function '__Pyx_c_negf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_negf(__pyx_t_float_complex a) { ^ tables/hdf5extension.c:26301:30: warning: unused function '__Pyx_c_is_zerof' [-Wunused-function] static CYTHON_INLINE int __Pyx_c_is_zerof(__pyx_t_float_complex a) { ^ tables/hdf5extension.c:26304:48: warning: unused function '__Pyx_c_conjf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conjf(__pyx_t_float_complex a) { ^ tables/hdf5extension.c:26318:52: warning: unused function '__Pyx_c_powf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_powf(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/hdf5extension.c:26377:49: warning: unused function '__pyx_t_double_complex_from_parts' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { ^ tables/hdf5extension.c:26387:30: warning: unused function '__Pyx_c_eq' [-Wunused-function] static CYTHON_INLINE int __Pyx_c_eq(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/hdf5extension.c:26390:49: warning: unused function '__Pyx_c_sum' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/hdf5extension.c:26396:49: warning: unused function '__Pyx_c_diff' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/hdf5extension.c:26408:49: warning: unused function '__Pyx_c_quot' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/hdf5extension.c:26415:49: warning: unused function '__Pyx_c_neg' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg(__pyx_t_double_complex a) { ^ tables/hdf5extension.c:26421:30: warning: unused function '__Pyx_c_is_zero' [-Wunused-function] static CYTHON_INLINE int __Pyx_c_is_zero(__pyx_t_double_complex a) { ^ tables/hdf5extension.c:26424:49: warning: unused function '__Pyx_c_conj' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj(__pyx_t_double_complex a) { ^ tables/hdf5extension.c:26438:53: warning: unused function '__Pyx_c_pow' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/hdf5extension.c:26543:27: warning: unused function '__Pyx_PyInt_AsChar' [-Wunused-function] static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) { ^ tables/hdf5extension.c:26562:28: warning: unused function '__Pyx_PyInt_AsShort' [-Wunused-function] static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) { ^ tables/hdf5extension.c:26657:26: warning: unused function '__Pyx_PyInt_AsLongDouble' [-Wunused-function] static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) { ^ tables/hdf5extension.c:26864:35: warning: function '__Pyx_PyInt_AsLongLong' is not needed and will not be emitted [-Wunneeded-internal-declaration] static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) { ^ tables/hdf5extension.c:20129:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew1' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew1(PyObject *__pyx_v_a) { ^ tables/hdf5extension.c:20172:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew2' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew2(PyObject *__pyx_v_a, PyObject *__pyx_v_b) { ^ tables/hdf5extension.c:20215:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew3' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew3(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c) { ^ tables/hdf5extension.c:20258:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew4' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew4(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c, PyObject *__pyx_v_d) { ^ tables/hdf5extension.c:20301:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew5' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew5(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c, PyObject *__pyx_v_d, PyObject *__pyx_v_e) { ^ tables/hdf5extension.c:21081:27: warning: unused function '__pyx_f_5numpy_set_array_base' [-Wunused-function] static CYTHON_INLINE void __pyx_f_5numpy_set_array_base(PyArrayObject *__pyx_v_arr, PyObject *__pyx_v_base) { ^ tables/hdf5extension.c:21160:32: warning: unused function '__pyx_f_5numpy_get_array_base' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__pyx_v_arr) { ^ tables/hdf5extension.c:21218:27: warning: unused function '__pyx_f_7cpython_8datetime_import_datetime' [-Wunused-function] static CYTHON_INLINE void __pyx_f_7cpython_8datetime_import_datetime(void) { ^ tables/hdf5extension.c:21242:32: warning: unused function '__pyx_f_7cpython_8datetime_date_new' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_7cpython_8datetime_date_new(int __pyx_v_year, int __pyx_v_month, int __pyx_v_day) { ^ tables/hdf5extension.c:21285:32: warning: unused function '__pyx_f_7cpython_8datetime_time_new' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_7cpython_8datetime_time_new(int __pyx_v_hour, int __pyx_v_minute, int __pyx_v_second, int __pyx_v_microsecond, PyObject *__pyx_v_tz) { ^ tables/hdf5extension.c:21328:32: warning: unused function '__pyx_f_7cpython_8datetime_datetime_new' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_7cpython_8datetime_datetime_new(int __pyx_v_year, int __pyx_v_month, int __pyx_v_day, int __pyx_v_hour, int __pyx_v_minute, int __pyx_v_second, int __pyx_v_microsecond, PyObject *__pyx_v_tz) { ^ tables/hdf5extension.c:21371:32: warning: unused function '__pyx_f_7cpython_8datetime_timedelta_new' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_7cpython_8datetime_timedelta_new(int __pyx_v_days, int __pyx_v_seconds, int __pyx_v_useconds) { ^ tables/hdf5extension.c:21414:32: warning: unused function '__pyx_f_7cpython_8datetime_time_tzinfo' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_7cpython_8datetime_time_tzinfo(PyObject *__pyx_v_o) { ^ tables/hdf5extension.c:21474:32: warning: unused function '__pyx_f_7cpython_8datetime_datetime_tzinfo' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_7cpython_8datetime_datetime_tzinfo(PyObject *__pyx_v_o) { ^ tables/hdf5extension.c:21534:26: warning: unused function '__pyx_f_7cpython_8datetime_date_year' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_date_year(PyObject *__pyx_v_o) { ^ tables/hdf5extension.c:21563:26: warning: unused function '__pyx_f_7cpython_8datetime_date_month' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_date_month(PyObject *__pyx_v_o) { ^ tables/hdf5extension.c:21592:26: warning: unused function '__pyx_f_7cpython_8datetime_date_day' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_date_day(PyObject *__pyx_v_o) { ^ tables/hdf5extension.c:21621:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_year' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_year(PyObject *__pyx_v_o) { ^ tables/hdf5extension.c:21650:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_month' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_month(PyObject *__pyx_v_o) { ^ tables/hdf5extension.c:21679:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_day' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_day(PyObject *__pyx_v_o) { ^ tables/hdf5extension.c:21708:26: warning: unused function '__pyx_f_7cpython_8datetime_time_hour' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_time_hour(PyObject *__pyx_v_o) { ^ tables/hdf5extension.c:21737:26: warning: unused function '__pyx_f_7cpython_8datetime_time_minute' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_time_minute(PyObject *__pyx_v_o) { ^ tables/hdf5extension.c:21766:26: warning: unused function '__pyx_f_7cpython_8datetime_time_second' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_time_second(PyObject *__pyx_v_o) { ^ tables/hdf5extension.c:21795:26: warning: unused function '__pyx_f_7cpython_8datetime_time_microsecond' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_time_microsecond(PyObject *__pyx_v_o) { ^ tables/hdf5extension.c:21824:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_hour' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_hour(PyObject *__pyx_v_o) { ^ tables/hdf5extension.c:21853:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_minute' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_minute(PyObject *__pyx_v_o) { ^ tables/hdf5extension.c:21882:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_second' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_second(PyObject *__pyx_v_o) { ^ tables/hdf5extension.c:21911:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_microsecond' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_microsecond(PyObject *__pyx_v_o) { ^ tables/hdf5extension.c:21940:26: warning: unused function '__pyx_f_7cpython_8datetime_timedelta_days' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_timedelta_days(PyObject *__pyx_v_o) { ^ tables/hdf5extension.c:21969:26: warning: unused function '__pyx_f_7cpython_8datetime_timedelta_seconds' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_timedelta_seconds(PyObject *__pyx_v_o) { ^ tables/hdf5extension.c:21997:26: warning: unused function '__pyx_f_7cpython_8datetime_timedelta_microseconds' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_timedelta_microseconds(PyObject *__pyx_v_o) { ^ 65 warnings generated. gcc: c-blosc/internal-complibs/zlib-1.2.8/zutil.c gcc: c-blosc/internal-complibs/zlib-1.2.8/uncompr.c g++ -L/sw/lib -bundle -L/sw/lib/python2.7/config -lpython2.7 -L/sw/lib -L/sw/lib -I/sw/include build/temp.macosx-10.9-x86_64-2.7/tables/hdf5extension.o build/temp.macosx-10.9-x86_64-2.7/src/utils.o build/temp.macosx-10.9-x86_64-2.7/src/typeconv.o build/temp.macosx-10.9-x86_64-2.7/src/H5ARRAY.o build/temp.macosx-10.9-x86_64-2.7/src/H5ARRAY-opt.o build/temp.macosx-10.9-x86_64-2.7/src/H5VLARRAY.o build/temp.macosx-10.9-x86_64-2.7/src/H5ATTR.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/hdf5/blosc_filter.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/blosc/blosc.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/blosc/blosclz.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/blosc/shuffle.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/lz4-r113/lz4.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/lz4-r113/lz4hc.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/snappy-1.1.1/snappy-c.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/snappy-1.1.1/snappy-sinksource.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/snappy-1.1.1/snappy-stubs-internal.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/snappy-1.1.1/snappy.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/adler32.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/compress.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/crc32.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/deflate.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/gzclose.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/gzlib.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/gzread.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/gzwrite.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/infback.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/inffast.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/inflate.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/inftrees.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/trees.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/uncompr.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/zutil.o -L/sw/lib -L/usr/local/lib64 -L/usr/local/lib -L/sw/lib64 -L/sw/lib -L/opt/lib64 -L/opt/lib -L/opt/local/lib64 -L/opt/local/lib -L/usr/lib64 -L/usr/lib -L/lib64 -L/lib -L/sw/lib -lhdf5 -o build/lib.macosx-10.9-x86_64-2.7/tables/hdf5extension.so -L/sw/lib ld: warning: directory not found for option '-L/usr/local/lib64' ld: warning: directory not found for option '-L/usr/local/lib' ld: warning: directory not found for option '-L/sw/lib64' ld: warning: directory not found for option '-L/opt/lib64' ld: warning: directory not found for option '-L/opt/lib' ld: warning: directory not found for option '-L/opt/local/lib64' ld: warning: directory not found for option '-L/opt/local/lib' ld: warning: directory not found for option '-L/usr/lib64' ld: warning: directory not found for option '-L/lib64' ld: warning: directory not found for option '-L/lib' building 'tables.tableextension' extension C compiler: gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -fwrapv -O3 -Wall -Wstrict-prototypes -I/sw/include compile options: '-DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_LZ4=1 -DHAVE_SNAPPY=1 -DHAVE_ZLIB=1 -Ic-blosc/hdf5 -I/sw/lib/python2.7/site-packages/numpy/core/include -I/sw/include -I/usr/local/include -I/sw/include -I/opt/include -I/opt/local/include -I/usr/include -I/include -Ic-blosc/blosc -Ic-blosc/internal-complibs/lz4-r113 -Ic-blosc/internal-complibs/snappy-1.1.1 -Ic-blosc/internal-complibs/zlib-1.2.8 -I/sw/include/python2.7 -c' extra options: '-I/sw/include -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 -DH5_NO_DEPRECATED_SYMBOLS -msse2' gcc: c-blosc/internal-complibs/zlib-1.2.8/gzread.c c-blosc/internal-complibs/zlib-1.2.8/gzread.c:30:15: warning: implicit declaration of function 'read' is invalid in C99 [-Wimplicit-function-declaration] ret = read(state->fd, buf + *have, len - *have); ^ c-blosc/internal-complibs/zlib-1.2.8/gzread.c:591:11: warning: implicit declaration of function 'close' is invalid in C99 [-Wimplicit-function-declaration] ret = close(state->fd); ^ 2 warnings generated. gcc: c-blosc/internal-complibs/snappy-1.1.1/snappy.cc gcc: c-blosc/internal-complibs/zlib-1.2.8/deflate.c gcc: c-blosc/blosc/blosclz.c gcc: c-blosc/internal-complibs/zlib-1.2.8/adler32.c gcc: c-blosc/internal-complibs/zlib-1.2.8/inffast.c gcc: c-blosc/internal-complibs/snappy-1.1.1/snappy-c.cc gcc: c-blosc/internal-complibs/zlib-1.2.8/compress.c gcc: c-blosc/blosc/blosc.c gcc: c-blosc/blosc/shuffle.c gcc: c-blosc/internal-complibs/zlib-1.2.8/inftrees.c gcc: c-blosc/internal-complibs/snappy-1.1.1/snappy-stubs-internal.cc gcc: c-blosc/internal-complibs/zlib-1.2.8/crc32.c gcc: src/typeconv.c gcc: c-blosc/internal-complibs/zlib-1.2.8/gzwrite.c c-blosc/internal-complibs/zlib-1.2.8/gzwrite.c:84:15: warning: implicit declaration of function 'write' is invalid in C99 [-Wimplicit-function-declaration] got = write(state->fd, strm->next_in, strm->avail_in); ^ c-blosc/internal-complibs/zlib-1.2.8/gzwrite.c:573:9: warning: implicit declaration of function 'close' is invalid in C99 [-Wimplicit-function-declaration] if (close(state->fd) == -1) ^ 2 warnings generated. gcc: c-blosc/internal-complibs/lz4-r113/lz4hc.c gcc: c-blosc/hdf5/blosc_filter.c gcc: tables/tableextension.c In file included from tables/tableextension.c:315: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ tables/tableextension.c:20651:31: warning: comparison of unsigned expression < 0 is always false [-Wtautological-compare] q -= ((r != 0) & ((r ^ b) < 0)); ~~~~~~~ ^ ~ tables/tableextension.c:20657:31: warning: comparison of unsigned expression < 0 is always false [-Wtautological-compare] r += ((r != 0) & ((r ^ b) < 0)) * b; ~~~~~~~ ^ ~ In file included from tables/tableextension.c:316: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ufuncobject.h:327: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/__ufunc_api.h:241:1: warning: unused function '_import_umath' [-Wunused-function] _import_umath(void) ^ tables/tableextension.c:22431:32: warning: unused function '__Pyx_PyUnicode_FromString' [-Wunused-function] static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(char* c_str) { ^ tables/tableextension.c:373:29: warning: unused function '__Pyx_Py_UNICODE_strlen' [-Wunused-function] static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) ^ tables/tableextension.c:20209:32: warning: unused function '__Pyx_GetItemInt_List_Fast' [-Wunused-function] static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, ^ tables/tableextension.c:20223:32: warning: unused function '__Pyx_GetItemInt_Tuple_Fast' [-Wunused-function] static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, ^ tables/tableextension.c:20563:26: warning: unused function '__Pyx_PyUnicode_Equals' [-Wunused-function] static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int equals) { ^ tables/tableextension.c:21297:48: warning: unused function '__pyx_t_float_complex_from_parts' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { ^ tables/tableextension.c:21307:30: warning: unused function '__Pyx_c_eqf' [-Wunused-function] static CYTHON_INLINE int __Pyx_c_eqf(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/tableextension.c:21310:48: warning: unused function '__Pyx_c_sumf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sumf(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/tableextension.c:21316:48: warning: unused function '__Pyx_c_difff' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_difff(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/tableextension.c:21328:48: warning: unused function '__Pyx_c_quotf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quotf(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/tableextension.c:21335:48: warning: unused function '__Pyx_c_negf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_negf(__pyx_t_float_complex a) { ^ tables/tableextension.c:21341:30: warning: unused function '__Pyx_c_is_zerof' [-Wunused-function] static CYTHON_INLINE int __Pyx_c_is_zerof(__pyx_t_float_complex a) { ^ tables/tableextension.c:21344:48: warning: unused function '__Pyx_c_conjf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conjf(__pyx_t_float_complex a) { ^ tables/tableextension.c:21358:52: warning: unused function '__Pyx_c_powf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_powf(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/tableextension.c:21417:49: warning: unused function '__pyx_t_double_complex_from_parts' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { ^ tables/tableextension.c:21427:30: warning: unused function '__Pyx_c_eq' [-Wunused-function] static CYTHON_INLINE int __Pyx_c_eq(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/tableextension.c:21430:49: warning: unused function '__Pyx_c_sum' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/tableextension.c:21436:49: warning: unused function '__Pyx_c_diff' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/tableextension.c:21448:49: warning: unused function '__Pyx_c_quot' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/tableextension.c:21455:49: warning: unused function '__Pyx_c_neg' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg(__pyx_t_double_complex a) { ^ tables/tableextension.c:21461:30: warning: unused function '__Pyx_c_is_zero' [-Wunused-function] static CYTHON_INLINE int __Pyx_c_is_zero(__pyx_t_double_complex a) { ^ tables/tableextension.c:21464:49: warning: unused function '__Pyx_c_conj' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj(__pyx_t_double_complex a) { ^ tables/tableextension.c:21478:53: warning: unused function '__Pyx_c_pow' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/tableextension.c:21583:27: warning: unused function '__Pyx_PyInt_AsChar' [-Wunused-function] static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) { ^ tables/tableextension.c:21602:28: warning: unused function '__Pyx_PyInt_AsShort' [-Wunused-function] static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) { ^ tables/tableextension.c:21697:26: warning: unused function '__Pyx_PyInt_AsLongDouble' [-Wunused-function] static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) { ^ tables/tableextension.c:16099:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew1' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew1(PyObject *__pyx_v_a) { ^ tables/tableextension.c:16142:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew2' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew2(PyObject *__pyx_v_a, PyObject *__pyx_v_b) { ^ tables/tableextension.c:16185:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew3' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew3(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c) { ^ tables/tableextension.c:16228:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew4' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew4(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c, PyObject *__pyx_v_d) { ^ tables/tableextension.c:16271:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew5' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew5(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c, PyObject *__pyx_v_d, PyObject *__pyx_v_e) { ^ tables/tableextension.c:17051:27: warning: unused function '__pyx_f_5numpy_set_array_base' [-Wunused-function] static CYTHON_INLINE void __pyx_f_5numpy_set_array_base(PyArrayObject *__pyx_v_arr, PyObject *__pyx_v_base) { ^ tables/tableextension.c:17130:32: warning: unused function '__pyx_f_5numpy_get_array_base' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__pyx_v_arr) { ^ tables/tableextension.c:17188:27: warning: unused function '__pyx_f_7cpython_8datetime_import_datetime' [-Wunused-function] static CYTHON_INLINE void __pyx_f_7cpython_8datetime_import_datetime(void) { ^ tables/tableextension.c:17212:32: warning: unused function '__pyx_f_7cpython_8datetime_date_new' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_7cpython_8datetime_date_new(int __pyx_v_year, int __pyx_v_month, int __pyx_v_day) { ^ tables/tableextension.c:17255:32: warning: unused function '__pyx_f_7cpython_8datetime_time_new' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_7cpython_8datetime_time_new(int __pyx_v_hour, int __pyx_v_minute, int __pyx_v_second, int __pyx_v_microsecond, PyObject *__pyx_v_tz) { ^ tables/tableextension.c:17298:32: warning: unused function '__pyx_f_7cpython_8datetime_datetime_new' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_7cpython_8datetime_datetime_new(int __pyx_v_year, int __pyx_v_month, int __pyx_v_day, int __pyx_v_hour, int __pyx_v_minute, int __pyx_v_second, int __pyx_v_microsecond, PyObject *__pyx_v_tz) { ^ tables/tableextension.c:17341:32: warning: unused function '__pyx_f_7cpython_8datetime_timedelta_new' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_7cpython_8datetime_timedelta_new(int __pyx_v_days, int __pyx_v_seconds, int __pyx_v_useconds) { ^ tables/tableextension.c:17384:32: warning: unused function '__pyx_f_7cpython_8datetime_time_tzinfo' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_7cpython_8datetime_time_tzinfo(PyObject *__pyx_v_o) { ^ tables/tableextension.c:17444:32: warning: unused function '__pyx_f_7cpython_8datetime_datetime_tzinfo' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_7cpython_8datetime_datetime_tzinfo(PyObject *__pyx_v_o) { ^ tables/tableextension.c:17504:26: warning: unused function '__pyx_f_7cpython_8datetime_date_year' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_date_year(PyObject *__pyx_v_o) { ^ tables/tableextension.c:17533:26: warning: unused function '__pyx_f_7cpython_8datetime_date_month' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_date_month(PyObject *__pyx_v_o) { ^ tables/tableextension.c:17562:26: warning: unused function '__pyx_f_7cpython_8datetime_date_day' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_date_day(PyObject *__pyx_v_o) { ^ tables/tableextension.c:17591:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_year' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_year(PyObject *__pyx_v_o) { ^ tables/tableextension.c:17620:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_month' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_month(PyObject *__pyx_v_o) { ^ tables/tableextension.c:17649:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_day' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_day(PyObject *__pyx_v_o) { ^ tables/tableextension.c:17678:26: warning: unused function '__pyx_f_7cpython_8datetime_time_hour' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_time_hour(PyObject *__pyx_v_o) { ^ tables/tableextension.c:17707:26: warning: unused function '__pyx_f_7cpython_8datetime_time_minute' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_time_minute(PyObject *__pyx_v_o) { ^ tables/tableextension.c:17736:26: warning: unused function '__pyx_f_7cpython_8datetime_time_second' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_time_second(PyObject *__pyx_v_o) { ^ tables/tableextension.c:17765:26: warning: unused function '__pyx_f_7cpython_8datetime_time_microsecond' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_time_microsecond(PyObject *__pyx_v_o) { ^ tables/tableextension.c:17794:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_hour' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_hour(PyObject *__pyx_v_o) { ^ tables/tableextension.c:17823:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_minute' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_minute(PyObject *__pyx_v_o) { ^ tables/tableextension.c:17852:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_second' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_second(PyObject *__pyx_v_o) { ^ tables/tableextension.c:17881:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_microsecond' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_microsecond(PyObject *__pyx_v_o) { ^ tables/tableextension.c:17910:26: warning: unused function '__pyx_f_7cpython_8datetime_timedelta_days' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_timedelta_days(PyObject *__pyx_v_o) { ^ tables/tableextension.c:17939:26: warning: unused function '__pyx_f_7cpython_8datetime_timedelta_seconds' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_timedelta_seconds(PyObject *__pyx_v_o) { ^ tables/tableextension.c:17967:26: warning: unused function '__pyx_f_7cpython_8datetime_timedelta_microseconds' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_timedelta_microseconds(PyObject *__pyx_v_o) { ^ 61 warnings generated. gcc: c-blosc/internal-complibs/zlib-1.2.8/gzlib.c c-blosc/internal-complibs/zlib-1.2.8/gzlib.c:256:24: warning: implicit declaration of function 'lseek' is invalid in C99 [-Wimplicit-function-declaration] state->start = LSEEK(state->fd, 0, SEEK_CUR); ^ c-blosc/internal-complibs/zlib-1.2.8/gzlib.c:14:17: note: expanded from macro 'LSEEK' # define LSEEK lseek ^ 1 warning generated. gcc: c-blosc/internal-complibs/zlib-1.2.8/gzclose.c gcc: c-blosc/internal-complibs/lz4-r113/lz4.c gcc: c-blosc/internal-complibs/zlib-1.2.8/trees.c gcc: src/H5ATTR.c src/H5ATTR.c:271:47: warning: comparison of unsigned expression < 0 is always false [-Wtautological-compare] if ( (type_size = H5Tget_size( attr_type )) < 0 ) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ^ ~ src/H5ATTR.c:436:8: warning: explicitly assigning a variable of type 'hid_t' (aka 'int') to itself [-Wself-assign] loc_id=loc_id; ~~~~~~^~~~~~~ 2 warnings generated. gcc: c-blosc/internal-complibs/zlib-1.2.8/inflate.c gcc: src/H5TB-opt.c gcc: c-blosc/internal-complibs/snappy-1.1.1/snappy-sinksource.cc gcc: c-blosc/internal-complibs/zlib-1.2.8/infback.c gcc: src/utils.c In file included from src/utils.c:2: In file included from src/utils.h:2: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from src/utils.c:2: In file included from src/utils.h:2: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:26: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1629:1: warning: unused function '_import_array' [-Wunused-function] _import_array(void) ^ 2 warnings generated. gcc: c-blosc/internal-complibs/zlib-1.2.8/zutil.c gcc: c-blosc/internal-complibs/zlib-1.2.8/uncompr.c g++ -L/sw/lib -bundle -L/sw/lib/python2.7/config -lpython2.7 -L/sw/lib -L/sw/lib -I/sw/include build/temp.macosx-10.9-x86_64-2.7/tables/tableextension.o build/temp.macosx-10.9-x86_64-2.7/src/utils.o build/temp.macosx-10.9-x86_64-2.7/src/typeconv.o build/temp.macosx-10.9-x86_64-2.7/src/H5TB-opt.o build/temp.macosx-10.9-x86_64-2.7/src/H5ATTR.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/hdf5/blosc_filter.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/blosc/blosc.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/blosc/blosclz.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/blosc/shuffle.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/lz4-r113/lz4.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/lz4-r113/lz4hc.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/snappy-1.1.1/snappy-c.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/snappy-1.1.1/snappy-sinksource.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/snappy-1.1.1/snappy-stubs-internal.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/snappy-1.1.1/snappy.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/adler32.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/compress.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/crc32.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/deflate.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/gzclose.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/gzlib.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/gzread.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/gzwrite.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/infback.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/inffast.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/inflate.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/inftrees.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/trees.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/uncompr.o build/temp.macosx-10.9-x86_64-2.7/c-blosc/internal-complibs/zlib-1.2.8/zutil.o -L/sw/lib -L/usr/local/lib64 -L/usr/local/lib -L/sw/lib64 -L/sw/lib -L/opt/lib64 -L/opt/lib -L/opt/local/lib64 -L/opt/local/lib -L/usr/lib64 -L/usr/lib -L/lib64 -L/lib -L/sw/lib -lhdf5 -o build/lib.macosx-10.9-x86_64-2.7/tables/tableextension.so -L/sw/lib ld: warning: directory not found for option '-L/usr/local/lib64' ld: warning: directory not found for option '-L/usr/local/lib' ld: warning: directory not found for option '-L/sw/lib64' ld: warning: directory not found for option '-L/opt/lib64' ld: warning: directory not found for option '-L/opt/lib' ld: warning: directory not found for option '-L/opt/local/lib64' ld: warning: directory not found for option '-L/opt/local/lib' ld: warning: directory not found for option '-L/usr/lib64' ld: warning: directory not found for option '-L/lib64' ld: warning: directory not found for option '-L/lib' building 'tables._comp_lzo' extension C compiler: gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -fwrapv -O3 -Wall -Wstrict-prototypes -I/sw/include compile options: '-DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_LZ4=1 -DHAVE_SNAPPY=1 -DHAVE_ZLIB=1 -Ic-blosc/hdf5 -I/sw/lib/python2.7/site-packages/numpy/core/include -I/sw/include -I/usr/local/include -I/sw/include -I/opt/include -I/opt/local/include -I/usr/include -I/include -Ic-blosc/blosc -Ic-blosc/internal-complibs/lz4-r113 -Ic-blosc/internal-complibs/snappy-1.1.1 -Ic-blosc/internal-complibs/zlib-1.2.8 -I/sw/include/python2.7 -c' extra options: '-I/sw/include -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 -DH5_NO_DEPRECATED_SYMBOLS -msse2' gcc: src/H5Zlzo.c gcc: tables/_comp_lzo.c tables/_comp_lzo.c:2067:28: warning: unused function '__Pyx_PyObject_AsString' [-Wunused-function] static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject* o) { ^ tables/_comp_lzo.c:2064:32: warning: unused function '__Pyx_PyUnicode_FromString' [-Wunused-function] static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(char* c_str) { ^ tables/_comp_lzo.c:361:29: warning: unused function '__Pyx_Py_UNICODE_strlen' [-Wunused-function] static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) ^ tables/_comp_lzo.c:2173:33: warning: unused function '__Pyx_PyIndex_AsSsize_t' [-Wunused-function] static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) { ^ tables/_comp_lzo.c:2181:33: warning: unused function '__Pyx_PyInt_FromSize_t' [-Wunused-function] static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) { ^ tables/_comp_lzo.c:2194:29: warning: unused function '__Pyx_PyInt_AsSize_t' [-Wunused-function] static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) { ^ tables/_comp_lzo.c:1144:32: warning: unused function '__Pyx_GetItemInt_List_Fast' [-Wunused-function] static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, ^ tables/_comp_lzo.c:1297:36: warning: unused function '__Pyx_PyInt_AsUnsignedChar' [-Wunused-function] static CYTHON_INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject* x) { ^ tables/_comp_lzo.c:1316:37: warning: unused function '__Pyx_PyInt_AsUnsignedShort' [-Wunused-function] static CYTHON_INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject* x) { ^ tables/_comp_lzo.c:1335:35: warning: unused function '__Pyx_PyInt_AsUnsignedInt' [-Wunused-function] static CYTHON_INLINE unsigned int __Pyx_PyInt_AsUnsignedInt(PyObject* x) { ^ tables/_comp_lzo.c:1354:27: warning: unused function '__Pyx_PyInt_AsChar' [-Wunused-function] static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) { ^ tables/_comp_lzo.c:1373:28: warning: unused function '__Pyx_PyInt_AsShort' [-Wunused-function] static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) { ^ tables/_comp_lzo.c:1392:26: warning: unused function '__Pyx_PyInt_AsInt' [-Wunused-function] static CYTHON_INLINE int __Pyx_PyInt_AsInt(PyObject* x) { ^ tables/_comp_lzo.c:1411:34: warning: unused function '__Pyx_PyInt_AsSignedChar' [-Wunused-function] static CYTHON_INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject* x) { ^ tables/_comp_lzo.c:1430:35: warning: unused function '__Pyx_PyInt_AsSignedShort' [-Wunused-function] static CYTHON_INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject* x) { ^ tables/_comp_lzo.c:1449:33: warning: unused function '__Pyx_PyInt_AsSignedInt' [-Wunused-function] static CYTHON_INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject* x) { ^ tables/_comp_lzo.c:1468:26: warning: unused function '__Pyx_PyInt_AsLongDouble' [-Wunused-function] static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) { ^ tables/_comp_lzo.c:1675:35: warning: function '__Pyx_PyInt_AsLongLong' is not needed and will not be emitted [-Wunneeded-internal-declaration] static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) { ^ tables/_comp_lzo.c:1797:42: warning: function '__Pyx_PyInt_AsSignedLongLong' is not needed and will not be emitted [-Wunneeded-internal-declaration] static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) { ^ 19 warnings generated. gcc -L/sw/lib -bundle -L/sw/lib/python2.7/config -lpython2.7 -L/sw/lib -L/sw/lib -I/sw/include build/temp.macosx-10.9-x86_64-2.7/tables/_comp_lzo.o build/temp.macosx-10.9-x86_64-2.7/src/H5Zlzo.o -L/sw/lib -L/usr/local/lib64 -L/usr/local/lib -L/sw/lib64 -L/sw/lib -L/opt/lib64 -L/opt/lib -L/opt/local/lib64 -L/opt/local/lib -L/usr/lib64 -L/usr/lib -L/lib64 -L/lib -L/sw/lib -lhdf5 -llzo2 -o build/lib.macosx-10.9-x86_64-2.7/tables/_comp_lzo.so -L/sw/lib ld: warning: directory not found for option '-L/usr/local/lib64' ld: warning: directory not found for option '-L/usr/local/lib' ld: warning: directory not found for option '-L/sw/lib64' ld: warning: directory not found for option '-L/opt/lib64' ld: warning: directory not found for option '-L/opt/lib' ld: warning: directory not found for option '-L/opt/local/lib64' ld: warning: directory not found for option '-L/opt/local/lib' ld: warning: directory not found for option '-L/usr/lib64' ld: warning: directory not found for option '-L/lib64' ld: warning: directory not found for option '-L/lib' building 'tables._comp_bzip2' extension C compiler: gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -fwrapv -O3 -Wall -Wstrict-prototypes -I/sw/include compile options: '-DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_LZ4=1 -DHAVE_SNAPPY=1 -DHAVE_ZLIB=1 -Ic-blosc/hdf5 -I/sw/lib/python2.7/site-packages/numpy/core/include -I/sw/include -I/usr/local/include -I/sw/include -I/opt/include -I/opt/local/include -I/usr/include -I/include -Ic-blosc/blosc -Ic-blosc/internal-complibs/lz4-r113 -Ic-blosc/internal-complibs/snappy-1.1.1 -Ic-blosc/internal-complibs/zlib-1.2.8 -I/sw/include/python2.7 -c' extra options: '-I/sw/include -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 -DH5_NO_DEPRECATED_SYMBOLS -msse2' gcc: src/H5Zbzip2.c gcc: tables/_comp_bzip2.c tables/_comp_bzip2.c:2067:28: warning: unused function '__Pyx_PyObject_AsString' [-Wunused-function] static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject* o) { ^ tables/_comp_bzip2.c:2064:32: warning: unused function '__Pyx_PyUnicode_FromString' [-Wunused-function] static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(char* c_str) { ^ tables/_comp_bzip2.c:361:29: warning: unused function '__Pyx_Py_UNICODE_strlen' [-Wunused-function] static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) ^ tables/_comp_bzip2.c:2173:33: warning: unused function '__Pyx_PyIndex_AsSsize_t' [-Wunused-function] static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) { ^ tables/_comp_bzip2.c:2181:33: warning: unused function '__Pyx_PyInt_FromSize_t' [-Wunused-function] static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) { ^ tables/_comp_bzip2.c:2194:29: warning: unused function '__Pyx_PyInt_AsSize_t' [-Wunused-function] static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) { ^ tables/_comp_bzip2.c:1144:32: warning: unused function '__Pyx_GetItemInt_List_Fast' [-Wunused-function] static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, ^ tables/_comp_bzip2.c:1297:36: warning: unused function '__Pyx_PyInt_AsUnsignedChar' [-Wunused-function] static CYTHON_INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject* x) { ^ tables/_comp_bzip2.c:1316:37: warning: unused function '__Pyx_PyInt_AsUnsignedShort' [-Wunused-function] static CYTHON_INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject* x) { ^ tables/_comp_bzip2.c:1335:35: warning: unused function '__Pyx_PyInt_AsUnsignedInt' [-Wunused-function] static CYTHON_INLINE unsigned int __Pyx_PyInt_AsUnsignedInt(PyObject* x) { ^ tables/_comp_bzip2.c:1354:27: warning: unused function '__Pyx_PyInt_AsChar' [-Wunused-function] static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) { ^ tables/_comp_bzip2.c:1373:28: warning: unused function '__Pyx_PyInt_AsShort' [-Wunused-function] static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) { ^ tables/_comp_bzip2.c:1392:26: warning: unused function '__Pyx_PyInt_AsInt' [-Wunused-function] static CYTHON_INLINE int __Pyx_PyInt_AsInt(PyObject* x) { ^ tables/_comp_bzip2.c:1411:34: warning: unused function '__Pyx_PyInt_AsSignedChar' [-Wunused-function] static CYTHON_INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject* x) { ^ tables/_comp_bzip2.c:1430:35: warning: unused function '__Pyx_PyInt_AsSignedShort' [-Wunused-function] static CYTHON_INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject* x) { ^ tables/_comp_bzip2.c:1449:33: warning: unused function '__Pyx_PyInt_AsSignedInt' [-Wunused-function] static CYTHON_INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject* x) { ^ tables/_comp_bzip2.c:1468:26: warning: unused function '__Pyx_PyInt_AsLongDouble' [-Wunused-function] static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) { ^ tables/_comp_bzip2.c:1675:35: warning: function '__Pyx_PyInt_AsLongLong' is not needed and will not be emitted [-Wunneeded-internal-declaration] static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) { ^ tables/_comp_bzip2.c:1797:42: warning: function '__Pyx_PyInt_AsSignedLongLong' is not needed and will not be emitted [-Wunneeded-internal-declaration] static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) { ^ 19 warnings generated. gcc -L/sw/lib -bundle -L/sw/lib/python2.7/config -lpython2.7 -L/sw/lib -L/sw/lib -I/sw/include build/temp.macosx-10.9-x86_64-2.7/tables/_comp_bzip2.o build/temp.macosx-10.9-x86_64-2.7/src/H5Zbzip2.o -L/sw/lib -L/usr/local/lib64 -L/usr/local/lib -L/sw/lib64 -L/sw/lib -L/opt/lib64 -L/opt/lib -L/opt/local/lib64 -L/opt/local/lib -L/usr/lib64 -L/usr/lib -L/lib64 -L/lib -L/sw/lib -lhdf5 -lbz2 -o build/lib.macosx-10.9-x86_64-2.7/tables/_comp_bzip2.so -L/sw/lib ld: warning: directory not found for option '-L/usr/local/lib64' ld: warning: directory not found for option '-L/usr/local/lib' ld: warning: directory not found for option '-L/sw/lib64' ld: warning: directory not found for option '-L/opt/lib64' ld: warning: directory not found for option '-L/opt/lib' ld: warning: directory not found for option '-L/opt/local/lib64' ld: warning: directory not found for option '-L/opt/local/lib' ld: warning: directory not found for option '-L/usr/lib64' ld: warning: directory not found for option '-L/lib64' ld: warning: directory not found for option '-L/lib' building 'tables.linkextension' extension C compiler: gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -fwrapv -O3 -Wall -Wstrict-prototypes -I/sw/include compile options: '-DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_LZ4=1 -DHAVE_SNAPPY=1 -DHAVE_ZLIB=1 -Ic-blosc/hdf5 -I/sw/lib/python2.7/site-packages/numpy/core/include -I/sw/include -I/usr/local/include -I/sw/include -I/opt/include -I/opt/local/include -I/usr/include -I/include -Ic-blosc/blosc -Ic-blosc/internal-complibs/lz4-r113 -Ic-blosc/internal-complibs/snappy-1.1.1 -Ic-blosc/internal-complibs/zlib-1.2.8 -I/sw/include/python2.7 -c' extra options: '-I/sw/include -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 -DH5_NO_DEPRECATED_SYMBOLS -msse2' gcc: tables/linkextension.c In file included from tables/linkextension.c:314: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from tables/linkextension.c:314: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:26: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1629:1: warning: unused function '_import_array' [-Wunused-function] _import_array(void) ^ In file included from tables/linkextension.c:315: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ufuncobject.h:327: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/__ufunc_api.h:241:1: warning: unused function '_import_umath' [-Wunused-function] _import_umath(void) ^ tables/linkextension.c:8675:32: warning: unused function '__Pyx_PyUnicode_FromString' [-Wunused-function] static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(char* c_str) { ^ tables/linkextension.c:373:29: warning: unused function '__Pyx_Py_UNICODE_strlen' [-Wunused-function] static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) ^ tables/linkextension.c:8784:33: warning: unused function '__Pyx_PyIndex_AsSsize_t' [-Wunused-function] static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) { ^ tables/linkextension.c:8792:33: warning: unused function '__Pyx_PyInt_FromSize_t' [-Wunused-function] static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) { ^ tables/linkextension.c:8805:29: warning: unused function '__Pyx_PyInt_AsSize_t' [-Wunused-function] static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) { ^ tables/linkextension.c:7043:27: warning: unused function '__Pyx_ErrFetch' [-Wunused-function] static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) { ^ tables/linkextension.c:7541:48: warning: unused function '__pyx_t_float_complex_from_parts' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { ^ tables/linkextension.c:7551:30: warning: unused function '__Pyx_c_eqf' [-Wunused-function] static CYTHON_INLINE int __Pyx_c_eqf(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/linkextension.c:7554:48: warning: unused function '__Pyx_c_sumf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sumf(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/linkextension.c:7560:48: warning: unused function '__Pyx_c_difff' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_difff(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/linkextension.c:7572:48: warning: unused function '__Pyx_c_quotf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quotf(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/linkextension.c:7579:48: warning: unused function '__Pyx_c_negf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_negf(__pyx_t_float_complex a) { ^ tables/linkextension.c:7585:30: warning: unused function '__Pyx_c_is_zerof' [-Wunused-function] static CYTHON_INLINE int __Pyx_c_is_zerof(__pyx_t_float_complex a) { ^ tables/linkextension.c:7588:48: warning: unused function '__Pyx_c_conjf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conjf(__pyx_t_float_complex a) { ^ tables/linkextension.c:7602:52: warning: unused function '__Pyx_c_powf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_powf(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/linkextension.c:7661:49: warning: unused function '__pyx_t_double_complex_from_parts' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { ^ tables/linkextension.c:7671:30: warning: unused function '__Pyx_c_eq' [-Wunused-function] static CYTHON_INLINE int __Pyx_c_eq(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/linkextension.c:7674:49: warning: unused function '__Pyx_c_sum' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/linkextension.c:7680:49: warning: unused function '__Pyx_c_diff' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/linkextension.c:7692:49: warning: unused function '__Pyx_c_quot' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/linkextension.c:7699:49: warning: unused function '__Pyx_c_neg' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg(__pyx_t_double_complex a) { ^ tables/linkextension.c:7705:30: warning: unused function '__Pyx_c_is_zero' [-Wunused-function] static CYTHON_INLINE int __Pyx_c_is_zero(__pyx_t_double_complex a) { ^ tables/linkextension.c:7708:49: warning: unused function '__Pyx_c_conj' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj(__pyx_t_double_complex a) { ^ tables/linkextension.c:7722:53: warning: unused function '__Pyx_c_pow' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/linkextension.c:7827:27: warning: unused function '__Pyx_PyInt_AsChar' [-Wunused-function] static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) { ^ tables/linkextension.c:7846:28: warning: unused function '__Pyx_PyInt_AsShort' [-Wunused-function] static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) { ^ tables/linkextension.c:7865:26: warning: unused function '__Pyx_PyInt_AsInt' [-Wunused-function] static CYTHON_INLINE int __Pyx_PyInt_AsInt(PyObject* x) { ^ tables/linkextension.c:7941:26: warning: unused function '__Pyx_PyInt_AsLongDouble' [-Wunused-function] static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) { ^ tables/linkextension.c:8148:35: warning: function '__Pyx_PyInt_AsLongLong' is not needed and will not be emitted [-Wunneeded-internal-declaration] static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) { ^ tables/linkextension.c:4008:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew1' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew1(PyObject *__pyx_v_a) { ^ tables/linkextension.c:4051:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew2' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew2(PyObject *__pyx_v_a, PyObject *__pyx_v_b) { ^ tables/linkextension.c:4094:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew3' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew3(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c) { ^ tables/linkextension.c:4137:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew4' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew4(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c, PyObject *__pyx_v_d) { ^ tables/linkextension.c:4180:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew5' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew5(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c, PyObject *__pyx_v_d, PyObject *__pyx_v_e) { ^ tables/linkextension.c:4960:27: warning: unused function '__pyx_f_5numpy_set_array_base' [-Wunused-function] static CYTHON_INLINE void __pyx_f_5numpy_set_array_base(PyArrayObject *__pyx_v_arr, PyObject *__pyx_v_base) { ^ tables/linkextension.c:5039:32: warning: unused function '__pyx_f_5numpy_get_array_base' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__pyx_v_arr) { ^ tables/linkextension.c:5097:27: warning: unused function '__pyx_f_7cpython_8datetime_import_datetime' [-Wunused-function] static CYTHON_INLINE void __pyx_f_7cpython_8datetime_import_datetime(void) { ^ tables/linkextension.c:5121:32: warning: unused function '__pyx_f_7cpython_8datetime_date_new' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_7cpython_8datetime_date_new(int __pyx_v_year, int __pyx_v_month, int __pyx_v_day) { ^ tables/linkextension.c:5164:32: warning: unused function '__pyx_f_7cpython_8datetime_time_new' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_7cpython_8datetime_time_new(int __pyx_v_hour, int __pyx_v_minute, int __pyx_v_second, int __pyx_v_microsecond, PyObject *__pyx_v_tz) { ^ tables/linkextension.c:5207:32: warning: unused function '__pyx_f_7cpython_8datetime_datetime_new' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_7cpython_8datetime_datetime_new(int __pyx_v_year, int __pyx_v_month, int __pyx_v_day, int __pyx_v_hour, int __pyx_v_minute, int __pyx_v_second, int __pyx_v_microsecond, PyObject *__pyx_v_tz) { ^ tables/linkextension.c:5250:32: warning: unused function '__pyx_f_7cpython_8datetime_timedelta_new' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_7cpython_8datetime_timedelta_new(int __pyx_v_days, int __pyx_v_seconds, int __pyx_v_useconds) { ^ tables/linkextension.c:5293:32: warning: unused function '__pyx_f_7cpython_8datetime_time_tzinfo' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_7cpython_8datetime_time_tzinfo(PyObject *__pyx_v_o) { ^ tables/linkextension.c:5353:32: warning: unused function '__pyx_f_7cpython_8datetime_datetime_tzinfo' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_7cpython_8datetime_datetime_tzinfo(PyObject *__pyx_v_o) { ^ tables/linkextension.c:5413:26: warning: unused function '__pyx_f_7cpython_8datetime_date_year' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_date_year(PyObject *__pyx_v_o) { ^ tables/linkextension.c:5442:26: warning: unused function '__pyx_f_7cpython_8datetime_date_month' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_date_month(PyObject *__pyx_v_o) { ^ tables/linkextension.c:5471:26: warning: unused function '__pyx_f_7cpython_8datetime_date_day' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_date_day(PyObject *__pyx_v_o) { ^ tables/linkextension.c:5500:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_year' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_year(PyObject *__pyx_v_o) { ^ tables/linkextension.c:5529:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_month' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_month(PyObject *__pyx_v_o) { ^ tables/linkextension.c:5558:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_day' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_day(PyObject *__pyx_v_o) { ^ tables/linkextension.c:5587:26: warning: unused function '__pyx_f_7cpython_8datetime_time_hour' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_time_hour(PyObject *__pyx_v_o) { ^ tables/linkextension.c:5616:26: warning: unused function '__pyx_f_7cpython_8datetime_time_minute' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_time_minute(PyObject *__pyx_v_o) { ^ tables/linkextension.c:5645:26: warning: unused function '__pyx_f_7cpython_8datetime_time_second' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_time_second(PyObject *__pyx_v_o) { ^ tables/linkextension.c:5674:26: warning: unused function '__pyx_f_7cpython_8datetime_time_microsecond' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_time_microsecond(PyObject *__pyx_v_o) { ^ tables/linkextension.c:5703:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_hour' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_hour(PyObject *__pyx_v_o) { ^ tables/linkextension.c:5732:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_minute' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_minute(PyObject *__pyx_v_o) { ^ tables/linkextension.c:5761:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_second' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_second(PyObject *__pyx_v_o) { ^ tables/linkextension.c:5790:26: warning: unused function '__pyx_f_7cpython_8datetime_datetime_microsecond' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_datetime_microsecond(PyObject *__pyx_v_o) { ^ tables/linkextension.c:5819:26: warning: unused function '__pyx_f_7cpython_8datetime_timedelta_days' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_timedelta_days(PyObject *__pyx_v_o) { ^ tables/linkextension.c:5848:26: warning: unused function '__pyx_f_7cpython_8datetime_timedelta_seconds' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_timedelta_seconds(PyObject *__pyx_v_o) { ^ tables/linkextension.c:5876:26: warning: unused function '__pyx_f_7cpython_8datetime_timedelta_microseconds' [-Wunused-function] static CYTHON_INLINE int __pyx_f_7cpython_8datetime_timedelta_microseconds(PyObject *__pyx_v_o) { ^ 63 warnings generated. gcc -L/sw/lib -bundle -L/sw/lib/python2.7/config -lpython2.7 -L/sw/lib -L/sw/lib -I/sw/include build/temp.macosx-10.9-x86_64-2.7/tables/linkextension.o -L/sw/lib -L/usr/local/lib64 -L/usr/local/lib -L/sw/lib64 -L/sw/lib -L/opt/lib64 -L/opt/lib -L/opt/local/lib64 -L/opt/local/lib -L/usr/lib64 -L/usr/lib -L/lib64 -L/lib -L/sw/lib -lhdf5 -o build/lib.macosx-10.9-x86_64-2.7/tables/linkextension.so -L/sw/lib ld: warning: directory not found for option '-L/usr/local/lib64' ld: warning: directory not found for option '-L/usr/local/lib' ld: warning: directory not found for option '-L/sw/lib64' ld: warning: directory not found for option '-L/opt/lib64' ld: warning: directory not found for option '-L/opt/lib' ld: warning: directory not found for option '-L/opt/local/lib64' ld: warning: directory not found for option '-L/opt/local/lib' ld: warning: directory not found for option '-L/usr/lib64' ld: warning: directory not found for option '-L/lib64' ld: warning: directory not found for option '-L/lib' building 'tables.lrucacheextension' extension C compiler: gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -fwrapv -O3 -Wall -Wstrict-prototypes -I/sw/include compile options: '-DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_LZ4=1 -DHAVE_SNAPPY=1 -DHAVE_ZLIB=1 -Ic-blosc/hdf5 -I/sw/lib/python2.7/site-packages/numpy/core/include -I/sw/include -I/usr/local/include -I/sw/include -I/opt/include -I/opt/local/include -I/usr/include -I/include -Ic-blosc/blosc -Ic-blosc/internal-complibs/lz4-r113 -Ic-blosc/internal-complibs/snappy-1.1.1 -Ic-blosc/internal-complibs/zlib-1.2.8 -I/sw/include/python2.7 -c' extra options: '-I/sw/include -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 -DH5_NO_DEPRECATED_SYMBOLS -msse2' gcc: tables/lrucacheextension.c In file included from tables/lrucacheextension.c:314: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from tables/lrucacheextension.c:315: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ufuncobject.h:327: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/__ufunc_api.h:241:1: warning: unused function '_import_umath' [-Wunused-function] _import_umath(void) ^ tables/lrucacheextension.c:12281:32: warning: unused function '__Pyx_PyUnicode_FromString' [-Wunused-function] static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(char* c_str) { ^ tables/lrucacheextension.c:363:29: warning: unused function '__Pyx_Py_UNICODE_strlen' [-Wunused-function] static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) ^ tables/lrucacheextension.c:12398:33: warning: unused function '__Pyx_PyInt_FromSize_t' [-Wunused-function] static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) { ^ tables/lrucacheextension.c:12411:29: warning: unused function '__Pyx_PyInt_AsSize_t' [-Wunused-function] static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) { ^ tables/lrucacheextension.c:10535:32: warning: unused function '__Pyx_GetItemInt_List_Fast' [-Wunused-function] static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, ^ tables/lrucacheextension.c:10549:32: warning: unused function '__Pyx_GetItemInt_Tuple_Fast' [-Wunused-function] static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, ^ tables/lrucacheextension.c:11200:48: warning: unused function '__pyx_t_float_complex_from_parts' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { ^ tables/lrucacheextension.c:11210:30: warning: unused function '__Pyx_c_eqf' [-Wunused-function] static CYTHON_INLINE int __Pyx_c_eqf(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/lrucacheextension.c:11213:48: warning: unused function '__Pyx_c_sumf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sumf(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/lrucacheextension.c:11219:48: warning: unused function '__Pyx_c_difff' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_difff(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/lrucacheextension.c:11231:48: warning: unused function '__Pyx_c_quotf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quotf(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/lrucacheextension.c:11238:48: warning: unused function '__Pyx_c_negf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_negf(__pyx_t_float_complex a) { ^ tables/lrucacheextension.c:11244:30: warning: unused function '__Pyx_c_is_zerof' [-Wunused-function] static CYTHON_INLINE int __Pyx_c_is_zerof(__pyx_t_float_complex a) { ^ tables/lrucacheextension.c:11247:48: warning: unused function '__Pyx_c_conjf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conjf(__pyx_t_float_complex a) { ^ tables/lrucacheextension.c:11261:52: warning: unused function '__Pyx_c_powf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_powf(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/lrucacheextension.c:11320:49: warning: unused function '__pyx_t_double_complex_from_parts' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { ^ tables/lrucacheextension.c:11330:30: warning: unused function '__Pyx_c_eq' [-Wunused-function] static CYTHON_INLINE int __Pyx_c_eq(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/lrucacheextension.c:11333:49: warning: unused function '__Pyx_c_sum' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/lrucacheextension.c:11339:49: warning: unused function '__Pyx_c_diff' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/lrucacheextension.c:11351:49: warning: unused function '__Pyx_c_quot' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/lrucacheextension.c:11358:49: warning: unused function '__Pyx_c_neg' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg(__pyx_t_double_complex a) { ^ tables/lrucacheextension.c:11364:30: warning: unused function '__Pyx_c_is_zero' [-Wunused-function] static CYTHON_INLINE int __Pyx_c_is_zero(__pyx_t_double_complex a) { ^ tables/lrucacheextension.c:11367:49: warning: unused function '__Pyx_c_conj' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj(__pyx_t_double_complex a) { ^ tables/lrucacheextension.c:11381:53: warning: unused function '__Pyx_c_pow' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/lrucacheextension.c:11429:36: warning: unused function '__Pyx_PyInt_AsUnsignedChar' [-Wunused-function] static CYTHON_INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject* x) { ^ tables/lrucacheextension.c:11448:37: warning: unused function '__Pyx_PyInt_AsUnsignedShort' [-Wunused-function] static CYTHON_INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject* x) { ^ tables/lrucacheextension.c:11467:35: warning: unused function '__Pyx_PyInt_AsUnsignedInt' [-Wunused-function] static CYTHON_INLINE unsigned int __Pyx_PyInt_AsUnsignedInt(PyObject* x) { ^ tables/lrucacheextension.c:11486:27: warning: unused function '__Pyx_PyInt_AsChar' [-Wunused-function] static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) { ^ tables/lrucacheextension.c:11505:28: warning: unused function '__Pyx_PyInt_AsShort' [-Wunused-function] static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) { ^ tables/lrucacheextension.c:11543:34: warning: unused function '__Pyx_PyInt_AsSignedChar' [-Wunused-function] static CYTHON_INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject* x) { ^ tables/lrucacheextension.c:11562:35: warning: unused function '__Pyx_PyInt_AsSignedShort' [-Wunused-function] static CYTHON_INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject* x) { ^ tables/lrucacheextension.c:11581:33: warning: unused function '__Pyx_PyInt_AsSignedInt' [-Wunused-function] static CYTHON_INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject* x) { ^ tables/lrucacheextension.c:11600:26: warning: unused function '__Pyx_PyInt_AsLongDouble' [-Wunused-function] static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) { ^ tables/lrucacheextension.c:11929:42: warning: function '__Pyx_PyInt_AsSignedLongLong' is not needed and will not be emitted [-Wunneeded-internal-declaration] static CYTHON_INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) { ^ tables/lrucacheextension.c:7900:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew1' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew1(PyObject *__pyx_v_a) { ^ tables/lrucacheextension.c:7943:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew2' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew2(PyObject *__pyx_v_a, PyObject *__pyx_v_b) { ^ tables/lrucacheextension.c:7986:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew3' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew3(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c) { ^ tables/lrucacheextension.c:8029:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew4' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew4(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c, PyObject *__pyx_v_d) { ^ tables/lrucacheextension.c:8072:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew5' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew5(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c, PyObject *__pyx_v_d, PyObject *__pyx_v_e) { ^ tables/lrucacheextension.c:8852:27: warning: unused function '__pyx_f_5numpy_set_array_base' [-Wunused-function] static CYTHON_INLINE void __pyx_f_5numpy_set_array_base(PyArrayObject *__pyx_v_arr, PyObject *__pyx_v_base) { ^ tables/lrucacheextension.c:8931:32: warning: unused function '__pyx_f_5numpy_get_array_base' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__pyx_v_arr) { ^ 43 warnings generated. gcc -L/sw/lib -bundle -L/sw/lib/python2.7/config -lpython2.7 -L/sw/lib -L/sw/lib -I/sw/include build/temp.macosx-10.9-x86_64-2.7/tables/lrucacheextension.o -L/sw/lib -L/usr/local/lib64 -L/usr/local/lib -L/sw/lib64 -L/sw/lib -L/opt/lib64 -L/opt/lib -L/opt/local/lib64 -L/opt/local/lib -L/usr/lib64 -L/usr/lib -L/lib64 -L/lib -L/sw/lib -o build/lib.macosx-10.9-x86_64-2.7/tables/lrucacheextension.so -L/sw/lib ld: warning: directory not found for option '-L/usr/local/lib64' ld: warning: directory not found for option '-L/usr/local/lib' ld: warning: directory not found for option '-L/sw/lib64' ld: warning: directory not found for option '-L/opt/lib64' ld: warning: directory not found for option '-L/opt/lib' ld: warning: directory not found for option '-L/opt/local/lib64' ld: warning: directory not found for option '-L/opt/local/lib' ld: warning: directory not found for option '-L/usr/lib64' ld: warning: directory not found for option '-L/lib64' ld: warning: directory not found for option '-L/lib' building 'tables.indexesextension' extension C compiler: gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -fwrapv -O3 -Wall -Wstrict-prototypes -I/sw/include compile options: '-DNDEBUG=1 -DHAVE_LZO2_LIB=1 -DHAVE_BZ2_LIB=1 -DHAVE_LZ4=1 -DHAVE_SNAPPY=1 -DHAVE_ZLIB=1 -Ic-blosc/hdf5 -I/sw/lib/python2.7/site-packages/numpy/core/include -I/sw/include -I/usr/local/include -I/sw/include -I/opt/include -I/opt/local/include -I/usr/include -I/include -Ic-blosc/blosc -Ic-blosc/internal-complibs/lz4-r113 -Ic-blosc/internal-complibs/snappy-1.1.1 -Ic-blosc/internal-complibs/zlib-1.2.8 -I/sw/include/python2.7 -c' extra options: '-I/sw/include -Isrc -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5E_auto_t_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Tarray_create_vers=2 -DH5Tget_array_dims_vers=2 -DH5Z_class_t_vers=2 -DH5_NO_DEPRECATED_SYMBOLS -msse2' gcc: tables/indexesextension.c In file included from tables/indexesextension.c:314: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from tables/indexesextension.c:315: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ufuncobject.h:327: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/__ufunc_api.h:241:1: warning: unused function '_import_umath' [-Wunused-function] _import_umath(void) ^ tables/indexesextension.c:16717:28: warning: unused function '__Pyx_PyObject_AsString' [-Wunused-function] static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject* o) { ^ tables/indexesextension.c:16714:32: warning: unused function '__Pyx_PyUnicode_FromString' [-Wunused-function] static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(char* c_str) { ^ tables/indexesextension.c:372:29: warning: unused function '__Pyx_Py_UNICODE_strlen' [-Wunused-function] static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) ^ tables/indexesextension.c:16831:33: warning: unused function '__Pyx_PyInt_FromSize_t' [-Wunused-function] static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) { ^ tables/indexesextension.c:16844:29: warning: unused function '__Pyx_PyInt_AsSize_t' [-Wunused-function] static CYTHON_INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) { ^ tables/indexesextension.c:15003:32: warning: unused function '__Pyx_GetItemInt_List_Fast' [-Wunused-function] static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, ^ tables/indexesextension.c:15017:32: warning: unused function '__Pyx_GetItemInt_Tuple_Fast' [-Wunused-function] static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, ^ tables/indexesextension.c:15633:48: warning: unused function '__pyx_t_float_complex_from_parts' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { ^ tables/indexesextension.c:15643:30: warning: unused function '__Pyx_c_eqf' [-Wunused-function] static CYTHON_INLINE int __Pyx_c_eqf(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/indexesextension.c:15646:48: warning: unused function '__Pyx_c_sumf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sumf(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/indexesextension.c:15652:48: warning: unused function '__Pyx_c_difff' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_difff(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/indexesextension.c:15664:48: warning: unused function '__Pyx_c_quotf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quotf(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/indexesextension.c:15671:48: warning: unused function '__Pyx_c_negf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_negf(__pyx_t_float_complex a) { ^ tables/indexesextension.c:15677:30: warning: unused function '__Pyx_c_is_zerof' [-Wunused-function] static CYTHON_INLINE int __Pyx_c_is_zerof(__pyx_t_float_complex a) { ^ tables/indexesextension.c:15680:48: warning: unused function '__Pyx_c_conjf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conjf(__pyx_t_float_complex a) { ^ tables/indexesextension.c:15694:52: warning: unused function '__Pyx_c_powf' [-Wunused-function] static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_powf(__pyx_t_float_complex a, __pyx_t_float_complex b) { ^ tables/indexesextension.c:15753:49: warning: unused function '__pyx_t_double_complex_from_parts' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { ^ tables/indexesextension.c:15763:30: warning: unused function '__Pyx_c_eq' [-Wunused-function] static CYTHON_INLINE int __Pyx_c_eq(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/indexesextension.c:15766:49: warning: unused function '__Pyx_c_sum' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/indexesextension.c:15772:49: warning: unused function '__Pyx_c_diff' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/indexesextension.c:15784:49: warning: unused function '__Pyx_c_quot' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/indexesextension.c:15791:49: warning: unused function '__Pyx_c_neg' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg(__pyx_t_double_complex a) { ^ tables/indexesextension.c:15797:30: warning: unused function '__Pyx_c_is_zero' [-Wunused-function] static CYTHON_INLINE int __Pyx_c_is_zero(__pyx_t_double_complex a) { ^ tables/indexesextension.c:15800:49: warning: unused function '__Pyx_c_conj' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj(__pyx_t_double_complex a) { ^ tables/indexesextension.c:15814:53: warning: unused function '__Pyx_c_pow' [-Wunused-function] static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow(__pyx_t_double_complex a, __pyx_t_double_complex b) { ^ tables/indexesextension.c:15919:27: warning: unused function '__Pyx_PyInt_AsChar' [-Wunused-function] static CYTHON_INLINE char __Pyx_PyInt_AsChar(PyObject* x) { ^ tables/indexesextension.c:15938:28: warning: unused function '__Pyx_PyInt_AsShort' [-Wunused-function] static CYTHON_INLINE short __Pyx_PyInt_AsShort(PyObject* x) { ^ tables/indexesextension.c:16033:26: warning: unused function '__Pyx_PyInt_AsLongDouble' [-Wunused-function] static CYTHON_INLINE int __Pyx_PyInt_AsLongDouble(PyObject* x) { ^ tables/indexesextension.c:16240:35: warning: function '__Pyx_PyInt_AsLongLong' is not needed and will not be emitted [-Wunneeded-internal-declaration] static CYTHON_INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) { ^ tables/indexesextension.c:12025:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew1' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew1(PyObject *__pyx_v_a) { ^ tables/indexesextension.c:12068:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew2' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew2(PyObject *__pyx_v_a, PyObject *__pyx_v_b) { ^ tables/indexesextension.c:12111:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew3' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew3(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c) { ^ tables/indexesextension.c:12154:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew4' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew4(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c, PyObject *__pyx_v_d) { ^ tables/indexesextension.c:12197:32: warning: unused function '__pyx_f_5numpy_PyArray_MultiIterNew5' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew5(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c, PyObject *__pyx_v_d, PyObject *__pyx_v_e) { ^ tables/indexesextension.c:12977:27: warning: unused function '__pyx_f_5numpy_set_array_base' [-Wunused-function] static CYTHON_INLINE void __pyx_f_5numpy_set_array_base(PyArrayObject *__pyx_v_arr, PyObject *__pyx_v_base) { ^ tables/indexesextension.c:13056:32: warning: unused function '__pyx_f_5numpy_get_array_base' [-Wunused-function] static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__pyx_v_arr) { ^ 38 warnings generated. gcc: src/idx-opt.c In file included from src/idx-opt.c:2: In file included from src/idx-opt.h:2: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from src/idx-opt.c:2: In file included from src/idx-opt.h:2: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:26: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1629:1: warning: unused function '_import_array' [-Wunused-function] _import_array(void) ^ 2 warnings generated. gcc: src/H5ARRAY-opt.c gcc -L/sw/lib -bundle -L/sw/lib/python2.7/config -lpython2.7 -L/sw/lib -L/sw/lib -I/sw/include build/temp.macosx-10.9-x86_64-2.7/tables/indexesextension.o build/temp.macosx-10.9-x86_64-2.7/src/H5ARRAY-opt.o build/temp.macosx-10.9-x86_64-2.7/src/idx-opt.o -L/sw/lib -L/usr/local/lib64 -L/usr/local/lib -L/sw/lib64 -L/sw/lib -L/opt/lib64 -L/opt/lib -L/opt/local/lib64 -L/opt/local/lib -L/usr/lib64 -L/usr/lib -L/lib64 -L/lib -L/sw/lib -lhdf5 -o build/lib.macosx-10.9-x86_64-2.7/tables/indexesextension.so -L/sw/lib ld: warning: directory not found for option '-L/usr/local/lib64' ld: warning: directory not found for option '-L/usr/local/lib' ld: warning: directory not found for option '-L/sw/lib64' ld: warning: directory not found for option '-L/opt/lib64' ld: warning: directory not found for option '-L/opt/lib' ld: warning: directory not found for option '-L/opt/local/lib64' ld: warning: directory not found for option '-L/opt/local/lib' ld: warning: directory not found for option '-L/usr/lib64' ld: warning: directory not found for option '-L/lib64' ld: warning: directory not found for option '-L/lib' /sw/bin/python2.7 setup.py build --hdf5=/sw/ --lzo=/sw/ --bzip2=/sw/ /private/tmp/blosc_list_compressorsyQz_4A.c:1:1: warning: type specifier missing, defaults to 'int' [-Wimplicit-int] main (int argc, char **argv) { ^~~~ /private/tmp/blosc_list_compressorsyQz_4A.c:2:5: warning: implicit declaration of function 'blosc_list_compressors' is invalid in C99 [-Wimplicit-function-declaration] blosc_list_compressors(); ^ 2 warnings generated. ld: library not found for -lblosc clang: error: linker command failed with exit code 1 (use -v to see invocation) * Using Python 2.7.8 (default, Jul 24 2014, 21:48:53) * Found numpy 1.8.1 package installed. * Found numexpr 2.4 package installed. * Found Cython 0.20.2 package installed. * Found HDF5 headers at ``/sw/include``, library at ``/sw/lib``. .. WARNING:: Could not find the HDF5 runtime. The HDF5 shared library was *not* found in the default library paths. In case of runtime problems, please remember to install it. * Found LZO 2 headers at ``/sw/include``, library at ``/sw/lib``. .. WARNING:: Could not find the LZO 2 runtime. The LZO 2 shared library was *not* found in the default library paths. In case of runtime problems, please remember to install it. * Skipping detection of LZO 1 since LZO 2 has already been found. * Found bzip2 headers at ``/sw/include``, library at ``/sw/lib``. ld: library not found for -lblosc clang: error: linker command failed with exit code 1 (use -v to see invocation) * Could not find blosc headers and library; using internal sources. Setting compiler flag '-msse2' running build running build_py copying tables/__init__.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/_past.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/array.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/atom.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/attributeset.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/carray.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/conditions.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/description.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/earray.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/exceptions.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/expression.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/file.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/filters.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/flavor.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/group.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/hdf5Extension.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/idxutils.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/index.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/indexes.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/indexesExtension.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/leaf.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/link.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/linkExtension.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/lrucacheExtension.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/node.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/parameters.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/path.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/registry.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/req_versions.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/table.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/tableExtension.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/undoredo.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/unimplemented.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/utils.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/utilsExtension.py -> build/lib.macosx-10.9-x86_64-2.7/tables copying tables/vlarray.py -> build/lib.macosx-10.9-x86_64-2.7/tables creating build/lib.macosx-10.9-x86_64-2.7/tables/nodes copying tables/nodes/__init__.py -> build/lib.macosx-10.9-x86_64-2.7/tables/nodes copying tables/nodes/filenode.py -> build/lib.macosx-10.9-x86_64-2.7/tables/nodes creating build/lib.macosx-10.9-x86_64-2.7/tables/scripts copying tables/scripts/__init__.py -> build/lib.macosx-10.9-x86_64-2.7/tables/scripts copying tables/scripts/pt2to3.py -> build/lib.macosx-10.9-x86_64-2.7/tables/scripts copying tables/scripts/ptdump.py -> build/lib.macosx-10.9-x86_64-2.7/tables/scripts copying tables/scripts/ptrepack.py -> build/lib.macosx-10.9-x86_64-2.7/tables/scripts creating build/lib.macosx-10.9-x86_64-2.7/tables/misc copying tables/misc/__init__.py -> build/lib.macosx-10.9-x86_64-2.7/tables/misc copying tables/misc/enum.py -> build/lib.macosx-10.9-x86_64-2.7/tables/misc copying tables/misc/proxydict.py -> build/lib.macosx-10.9-x86_64-2.7/tables/misc creating build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/__init__.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/check_leaks.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/common.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/create_backcompat_indexes.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_all.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_array.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_attributes.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_backcompat.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_basics.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_carray.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_create.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_do_undo.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_earray.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_enum.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_expression.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_garbage.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_hdf5compat.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_index_backcompat.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_indexes.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_indexvalues.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_links.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_lists.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_nestedtypes.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_numpy.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_queries.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_tables.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_tablesMD.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_timetype.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_tree.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_types.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_vlarray.py -> build/lib.macosx-10.9-x86_64-2.7/tables/tests creating build/lib.macosx-10.9-x86_64-2.7/tables/nodes/tests copying tables/nodes/tests/__init__.py -> build/lib.macosx-10.9-x86_64-2.7/tables/nodes/tests copying tables/nodes/tests/test_filenode.py -> build/lib.macosx-10.9-x86_64-2.7/tables/nodes/tests copying tables/tests/array_mdatom.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/attr-u16.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/blosc_bigendian.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/elink.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/elink2.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/ex-noattr.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/flavored_vlarrays-format1.6.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/float.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/idx-std-1.x.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/indexes_2_0.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/indexes_2_1.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/nested-type-with-gaps.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/non-chunked-table.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/oldflavor_numeric.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/python2.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/python3.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/scalar.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/slink.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/smpl_compound_chunked.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/smpl_enum.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/smpl_f64be.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/smpl_f64le.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/smpl_i32be.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/smpl_i32le.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/smpl_i64be.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/smpl_i64le.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/smpl_SDSextendible.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/smpl_unsupptype.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/Table2_1_lzo_nrv2e_shuffle.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/Tables_lzo1.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/Tables_lzo1_shuffle.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/Tables_lzo2.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/Tables_lzo2_shuffle.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/test_szip.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/time-table-vlarray-1_x.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/times-nested-be.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/vlstr_attr.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/vlunicode_endian.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/zerodim-attrs-1.3.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/zerodim-attrs-1.4.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/tests/matlab_file.mat -> build/lib.macosx-10.9-x86_64-2.7/tables/tests copying tables/nodes/tests/test_filenode.dat -> build/lib.macosx-10.9-x86_64-2.7/tables/nodes/tests copying tables/nodes/tests/test_filenode.xbm -> build/lib.macosx-10.9-x86_64-2.7/tables/nodes/tests copying tables/nodes/tests/test_filenode_v1.h5 -> build/lib.macosx-10.9-x86_64-2.7/tables/nodes/tests running build_ext running build_scripts creating build/scripts-2.7 copying and adjusting utils/ptdump -> build/scripts-2.7 copying and adjusting utils/ptrepack -> build/scripts-2.7 copying and adjusting utils/pt2to3 -> build/scripts-2.7 changing mode of build/scripts-2.7/ptdump from 644 to 755 changing mode of build/scripts-2.7/ptrepack from 644 to 755 changing mode of build/scripts-2.7/pt2to3 from 644 to 755 /bin/rm -rf /sw/build.build/root-pytables-py27-3.1.1-1 /bin/mkdir -p /sw/build.build/root-pytables-py27-3.1.1-1/sw /bin/mkdir -p /sw/build.build/root-pytables-py27-3.1.1-1/DEBIAN /usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-pytables-py27-3.1.1-1 sudo -u fink-bld [ENV] sh -c /tmp/fink.kSCVl /sw/bin/python2.7 setup.py install --cflags='-I/sw/include' --lflags='-L/sw/lib' --hdf5=/sw/ --lzo=/sw/ --bzip2=/sw/ --root=/sw/build.build/root-pytables-py27-3.1.1-1 /private/tmp/blosc_list_compressorsIq9_yJ.c:1:1: warning: type specifier missing, defaults to 'int' [-Wimplicit-int] main (int argc, char **argv) { ^~~~ /private/tmp/blosc_list_compressorsIq9_yJ.c:2:5: warning: implicit declaration of function 'blosc_list_compressors' is invalid in C99 [-Wimplicit-function-declaration] blosc_list_compressors(); ^ 2 warnings generated. ld: library not found for -lblosc clang: error: linker command failed with exit code 1 (use -v to see invocation) * Using Python 2.7.8 (default, Jul 24 2014, 21:48:53) * Found numpy 1.8.1 package installed. * Found numexpr 2.4 package installed. * Found Cython 0.20.2 package installed. * Found HDF5 headers at ``/sw/include``, library at ``/sw/lib``. .. WARNING:: Could not find the HDF5 runtime. The HDF5 shared library was *not* found in the default library paths. In case of runtime problems, please remember to install it. * Found LZO 2 headers at ``/sw/include``, library at ``/sw/lib``. .. WARNING:: Could not find the LZO 2 runtime. The LZO 2 shared library was *not* found in the default library paths. In case of runtime problems, please remember to install it. * Skipping detection of LZO 1 since LZO 2 has already been found. * Found bzip2 headers at ``/sw/include``, library at ``/sw/lib``. ld: library not found for -lblosc clang: error: linker command failed with exit code 1 (use -v to see invocation) * Could not find blosc headers and library; using internal sources. Setting compiler flag '-msse2' running install running build running build_py running build_ext running build_scripts running install_lib creating /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib creating /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7 creating /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages creating /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/__init__.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/_comp_bzip2.so -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/_comp_lzo.so -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/_past.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/array.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/atom.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/attributeset.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/carray.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/conditions.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/description.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/earray.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/exceptions.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/expression.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/file.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/filters.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/flavor.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/group.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/hdf5Extension.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/hdf5extension.so -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/idxutils.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/index.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/indexes.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/indexesExtension.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/indexesextension.so -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/leaf.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/link.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/linkExtension.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/linkextension.so -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/lrucacheExtension.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/lrucacheextension.so -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables creating /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/misc copying build/lib.macosx-10.9-x86_64-2.7/tables/misc/__init__.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/misc copying build/lib.macosx-10.9-x86_64-2.7/tables/misc/enum.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/misc copying build/lib.macosx-10.9-x86_64-2.7/tables/misc/proxydict.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/misc copying build/lib.macosx-10.9-x86_64-2.7/tables/node.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables creating /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/nodes copying build/lib.macosx-10.9-x86_64-2.7/tables/nodes/__init__.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/nodes copying build/lib.macosx-10.9-x86_64-2.7/tables/nodes/filenode.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/nodes creating /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/nodes/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/nodes/tests/__init__.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/nodes/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/nodes/tests/test_filenode.dat -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/nodes/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/nodes/tests/test_filenode.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/nodes/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/nodes/tests/test_filenode.xbm -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/nodes/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/nodes/tests/test_filenode_v1.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/nodes/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/parameters.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/path.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/registry.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/req_versions.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables creating /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/scripts copying build/lib.macosx-10.9-x86_64-2.7/tables/scripts/__init__.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/scripts copying build/lib.macosx-10.9-x86_64-2.7/tables/scripts/pt2to3.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/scripts copying build/lib.macosx-10.9-x86_64-2.7/tables/scripts/ptdump.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/scripts copying build/lib.macosx-10.9-x86_64-2.7/tables/scripts/ptrepack.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/scripts copying build/lib.macosx-10.9-x86_64-2.7/tables/table.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/tableExtension.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/tableextension.so -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables creating /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/__init__.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/array_mdatom.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/attr-u16.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/blosc_bigendian.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/check_leaks.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/common.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/create_backcompat_indexes.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/elink.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/elink2.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/ex-noattr.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/flavored_vlarrays-format1.6.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/float.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/idx-std-1.x.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/indexes_2_0.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/indexes_2_1.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/matlab_file.mat -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/nested-type-with-gaps.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/non-chunked-table.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/oldflavor_numeric.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/python2.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/python3.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/scalar.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/slink.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/smpl_compound_chunked.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/smpl_enum.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/smpl_f64be.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/smpl_f64le.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/smpl_i32be.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/smpl_i32le.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/smpl_i64be.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/smpl_i64le.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/smpl_SDSextendible.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/smpl_unsupptype.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/Table2_1_lzo_nrv2e_shuffle.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/Tables_lzo1.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/Tables_lzo1_shuffle.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/Tables_lzo2.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/Tables_lzo2_shuffle.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_all.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_array.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_attributes.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_backcompat.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_basics.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_carray.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_create.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_do_undo.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_earray.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_enum.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_expression.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_garbage.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_hdf5compat.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_index_backcompat.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_indexes.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_indexvalues.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_links.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_lists.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_nestedtypes.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_numpy.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_queries.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_szip.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_tables.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_tablesMD.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_timetype.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_tree.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_types.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/test_vlarray.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/time-table-vlarray-1_x.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/times-nested-be.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/vlstr_attr.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/vlunicode_endian.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/zerodim-attrs-1.3.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/tests/zerodim-attrs-1.4.h5 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests copying build/lib.macosx-10.9-x86_64-2.7/tables/undoredo.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/unimplemented.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/utils.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/utilsExtension.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/utilsextension.so -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables copying build/lib.macosx-10.9-x86_64-2.7/tables/vlarray.py -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/__init__.py to __init__.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/_past.py to _past.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/array.py to array.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/atom.py to atom.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/attributeset.py to attributeset.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/carray.py to carray.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/conditions.py to conditions.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/description.py to description.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/earray.py to earray.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/exceptions.py to exceptions.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/expression.py to expression.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/file.py to file.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/filters.py to filters.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/flavor.py to flavor.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/group.py to group.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/hdf5Extension.py to hdf5Extension.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/idxutils.py to idxutils.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/index.py to index.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/indexes.py to indexes.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/indexesExtension.py to indexesExtension.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/leaf.py to leaf.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/link.py to link.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/linkExtension.py to linkExtension.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/lrucacheExtension.py to lrucacheExtension.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/misc/__init__.py to __init__.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/misc/enum.py to enum.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/misc/proxydict.py to proxydict.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/node.py to node.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/nodes/__init__.py to __init__.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/nodes/filenode.py to filenode.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/nodes/tests/__init__.py to __init__.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/nodes/tests/test_filenode.py to test_filenode.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/parameters.py to parameters.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/path.py to path.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/registry.py to registry.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/req_versions.py to req_versions.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/scripts/__init__.py to __init__.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/scripts/pt2to3.py to pt2to3.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/scripts/ptdump.py to ptdump.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/scripts/ptrepack.py to ptrepack.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/table.py to table.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tableExtension.py to tableExtension.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/__init__.py to __init__.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/check_leaks.py to check_leaks.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/common.py to common.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/create_backcompat_indexes.py to create_backcompat_indexes.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_all.py to test_all.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_array.py to test_array.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_attributes.py to test_attributes.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_backcompat.py to test_backcompat.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_basics.py to test_basics.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_carray.py to test_carray.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_create.py to test_create.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_do_undo.py to test_do_undo.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_earray.py to test_earray.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_enum.py to test_enum.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_expression.py to test_expression.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_garbage.py to test_garbage.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_hdf5compat.py to test_hdf5compat.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_index_backcompat.py to test_index_backcompat.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_indexes.py to test_indexes.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_indexvalues.py to test_indexvalues.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_links.py to test_links.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_lists.py to test_lists.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_nestedtypes.py to test_nestedtypes.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_numpy.py to test_numpy.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_queries.py to test_queries.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_tables.py to test_tables.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_tablesMD.py to test_tablesMD.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_timetype.py to test_timetype.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_tree.py to test_tree.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_types.py to test_types.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/tests/test_vlarray.py to test_vlarray.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/undoredo.py to undoredo.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/unimplemented.py to unimplemented.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/utils.py to utils.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/utilsExtension.py to utilsExtension.pyc byte-compiling /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables/vlarray.py to vlarray.pyc running install_scripts creating /sw/build.build/root-pytables-py27-3.1.1-1/sw/bin copying build/scripts-2.7/pt2to3 -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/bin copying build/scripts-2.7/ptdump -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/bin copying build/scripts-2.7/ptrepack -> /sw/build.build/root-pytables-py27-3.1.1-1/sw/bin changing mode of /sw/build.build/root-pytables-py27-3.1.1-1/sw/bin/pt2to3 to 755 changing mode of /sw/build.build/root-pytables-py27-3.1.1-1/sw/bin/ptdump to 755 changing mode of /sw/build.build/root-pytables-py27-3.1.1-1/sw/bin/ptrepack to 755 running install_egg_info Writing /sw/build.build/root-pytables-py27-3.1.1-1/sw/lib/python2.7/site-packages/tables-3.1.1-py2.7.egg-info mv /sw/build.build/root-pytables-py27-3.1.1-1/sw/bin/pt2to3 /sw/build.build/root-pytables-py27-3.1.1-1/sw/bin/pt2to3-py27 mv /sw/build.build/root-pytables-py27-3.1.1-1/sw/bin/ptdump /sw/build.build/root-pytables-py27-3.1.1-1/sw/bin/ptdump-py27 mv /sw/build.build/root-pytables-py27-3.1.1-1/sw/bin/ptrepack /sw/build.build/root-pytables-py27-3.1.1-1/sw/bin/ptrepack-py27 sudo -u fink-bld [ENV] sh -c /tmp/fink.PeIYv /usr/bin/install -d -m 700 /sw/build.build/root-pytables-py27-3.1.1-1/sw/share/doc/pytables-py27 /bin/cp -r *.txt /sw/build.build/root-pytables-py27-3.1.1-1/sw/share/doc/pytables-py27/ /bin/cp -r doc/html /sw/build.build/root-pytables-py27-3.1.1-1/sw/share/doc/pytables-py27/ /bin/cp -r doc/scripts /sw/build.build/root-pytables-py27-3.1.1-1/sw/share/doc/pytables-py27/ /bin/cp -r examples /sw/build.build/root-pytables-py27-3.1.1-1/sw/share/doc/pytables-py27/ /bin/cp -r LICENSES /sw/build.build/root-pytables-py27-3.1.1-1/sw/share/doc/pytables-py27/ /bin/chmod -R go=u-w /sw/build.build/root-pytables-py27-3.1.1-1/sw/share/doc/pytables-py27 /bin/rm -f /sw/build.build/root-pytables-py27-3.1.1-1/sw/info/dir /sw/build.build/root-pytables-py27-3.1.1-1/sw/info/dir.old /sw/build.build/root-pytables-py27-3.1.1-1/sw/share/info/dir /sw/build.build/root-pytables-py27-3.1.1-1/sw/share/info/dir.old Reverting ownership of install dir to root Writing control file... Writing package script postinst... Writing package script prerm... Writing md5sums file... env LANG=C LC_ALL=C dpkg-deb -b root-pytables-py27-3.1.1-1 /sw/fink/10.9/stable/main/binary-darwin-x86_64/sci dpkg-deb: building package `pytables-py27' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/sci/pytables-py27_3.1.1-1_darwin-x86_64.deb'. Removing runtime build-lock... Removing build-lock package... /sw/bin/dpkg-lockwait -r fink-buildlock-pytables-py27-3.1.1-1 (Reading database ... 14052 files and directories currently installed.) Removing fink-buildlock-pytables-py27-3.1.1-1 ...