printf '

' | fink --no-use-binary-dist --yes  --build-as-nobody rebuild tabix 2>&1
The package 'tabix' will be built without being installed.
Reading build dependency for tabix-0.2.6-1...
Reading dependency for tabix-0.2.6-1...
Reading build conflict for tabix-0.2.6-1...
The following package will be rebuilt:
 tabix
curl --connect-timeout 30 -f -L -A 'fink/0.37.0' -O http://distfiles.master.finkmirrors.net/distfiles/tabix-0.2.6.tar.bz2
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  2 54403    2  1206    0     0   5573      0  0:00:09 --:--:--  0:00:09  5557
100 54403  100 54403    0     0   123k      0 --:--:-- --:--:-- --:--:--  123k
Setting runtime build-lock...
dpkg-deb -b /sw/build.build/root-fink-buildlock-tabix-0.2.6-1 /sw/build.build
dpkg-deb: building package `fink-buildlock-tabix-0.2.6-1' in `/sw/build.build/fink-buildlock-tabix-0.2.6-1_2014.08.07-04.04.41_darwin-x86_64.deb'.
Installing build-lock package...
/sw/bin/dpkg-lockwait -i /sw/build.build/fink-buildlock-tabix-0.2.6-1_2014.08.07-04.04.41_darwin-x86_64.deb
Selecting previously deselected package fink-buildlock-tabix-0.2.6-1.
(Reading database ... 4740 files and directories currently installed.)
Unpacking fink-buildlock-tabix-0.2.6-1 (from .../fink-buildlock-tabix-0.2.6-1_2014.08.07-04.04.41_darwin-x86_64.deb) ...
Setting up fink-buildlock-tabix-0.2.6-1 (2014.08.07-04.04.41) ...

sudo -u fink-bld [ENV] sh -c /tmp/fink.yXGkP
env LANG=C LC_ALL=C /sw/bin/tar  --no-same-owner --no-same-permissions -xvf /sw/src/tabix-0.2.6.tar.bz2
tabix-0.2.6/
tabix-0.2.6/ChangeLog
tabix-0.2.6/Makefile
tabix-0.2.6/NEWS
tabix-0.2.6/TabixReader.java
tabix-0.2.6/bam_endian.h
tabix-0.2.6/bedidx.c
tabix-0.2.6/bgzf.c
tabix-0.2.6/bgzf.h
tabix-0.2.6/bgzip.c
tabix-0.2.6/example.gtf.gz
tabix-0.2.6/example.gtf.gz.tbi
tabix-0.2.6/index.c
tabix-0.2.6/khash.h
tabix-0.2.6/knetfile.c
tabix-0.2.6/knetfile.h
tabix-0.2.6/kseq.h
tabix-0.2.6/ksort.h
tabix-0.2.6/kstring.c
tabix-0.2.6/kstring.h
tabix-0.2.6/main.c
tabix-0.2.6/perl/
tabix-0.2.6/perl/MANIFEST
tabix-0.2.6/perl/Makefile.PL
tabix-0.2.6/perl/Tabix.pm
tabix-0.2.6/perl/Tabix.xs
tabix-0.2.6/perl/TabixIterator.pm
tabix-0.2.6/perl/t/
tabix-0.2.6/perl/t/01local.t
tabix-0.2.6/perl/t/02remote.t
tabix-0.2.6/perl/typemap
tabix-0.2.6/python/
tabix-0.2.6/python/setup.py
tabix-0.2.6/python/tabixmodule.c
tabix-0.2.6/python/test.py
tabix-0.2.6/tabix.1
tabix-0.2.6/tabix.h
tabix-0.2.6/tabix.py
tabix-0.2.6/tabix.tex
sudo -u fink-bld [ENV] sh -c /tmp/fink.VpsRO
make
gcc -c -g -Wall -O2 -fPIC  -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -DBGZF_CACHE  bgzf.c -o bgzf.o
gcc -c -g -Wall -O2 -fPIC  -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -DBGZF_CACHE  kstring.c -o kstring.o
gcc -c -g -Wall -O2 -fPIC  -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -DBGZF_CACHE  knetfile.c -o knetfile.o
gcc -c -g -Wall -O2 -fPIC  -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -DBGZF_CACHE  index.c -o index.o
gcc -c -g -Wall -O2 -fPIC  -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -DBGZF_CACHE  bedidx.c -o bedidx.o
gcc -c -g -Wall -O2 -fPIC  -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -DBGZF_CACHE  main.c -o main.o
gcc -c -g -Wall -O2 -fPIC  -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -DBGZF_CACHE  bgzip.c -o bgzip.o
bgzf.c:80:1: warning: unused function 'kh_clear_cache' [-Wunused-function]
KHASH_MAP_INIT_INT64(cache, cache_t)
^
./khash.h:468:2: note: expanded from macro 'KHASH_MAP_INIT_INT64'
        KHASH_INIT(name, uint64_t, khval_t, 1, kh_int64_hash_func, kh_int64_hash_equal)
        ^
./khash.h:140:21: note: expanded from macro 'KHASH_INIT'
        static inline void kh_clear_##name(kh_##name##_t *h)                            \
                           ^
<scratch space>:203:1: note: expanded from here
kh_clear_cache
^
bedidx.c:20:1: warning: unused function 'kh_clear_reg' [-Wunused-function]
KHASH_MAP_INIT_STR(reg, bed_reglist_t)
^
./khash.h:484:2: note: expanded from macro 'KHASH_MAP_INIT_STR'
        KHASH_INIT(name, kh_cstr_t, khval_t, 1, kh_str_hash_func, kh_str_hash_equal)
        ^
./khash.h:140:21: note: expanded from macro 'KHASH_INIT'
        static inline void kh_clear_##name(kh_##name##_t *h)                            \
                           ^
<scratch space>:212:1: note: expanded from here
kh_clear_reg
^
bedidx.c:20:1: warning: unused function 'kh_del_reg' [-Wunused-function]
./khash.h:484:2: note: expanded from macro 'KHASH_MAP_INIT_STR'
        KHASH_INIT(name, kh_cstr_t, khval_t, 1, kh_str_hash_func, kh_str_hash_equal)
        ^
./khash.h:259:21: note: expanded from macro 'KHASH_INIT'
        static inline void kh_del_##name(kh_##name##_t *h, khint_t x)           \
                           ^
<scratch space>:226:1: note: expanded from here
kh_del_reg
^
index.c:34:1: warning: unused function 'kh_clear_i' [-Wunused-function]
KHASH_MAP_INIT_INT(i, ti_binlist_t)
^
./khash.h:453:2: note: expanded from macro 'KHASH_MAP_INIT_INT'
        KHASH_INIT(name, uint32_t, khval_t, 1, kh_int_hash_func, kh_int_hash_equal)
        ^
./khash.h:140:21: note: expanded from macro 'KHASH_INIT'
        static inline void kh_clear_##name(kh_##name##_t *h)                            \
                           ^
<scratch space>:25:1: note: expanded from here
kh_clear_i
^
index.c:34:1: warning: unused function 'kh_del_i' [-Wunused-function]
./khash.h:453:2: note: expanded from macro 'KHASH_MAP_INIT_INT'
        KHASH_INIT(name, uint32_t, khval_t, 1, kh_int_hash_func, kh_int_hash_equal)
        ^
./khash.h:259:21: note: expanded from macro 'KHASH_INIT'
        static inline void kh_del_##name(kh_##name##_t *h, khint_t x)           \
                           ^
<scratch space>:39:1: note: expanded from here
kh_del_i
^
index.c:35:1: warning: unused function 'kh_clear_s' [-Wunused-function]
KHASH_MAP_INIT_STR(s, int)
^
./khash.h:484:2: note: expanded from macro 'KHASH_MAP_INIT_STR'
        KHASH_INIT(name, kh_cstr_t, khval_t, 1, kh_str_hash_func, kh_str_hash_equal)
        ^
./khash.h:140:21: note: expanded from macro 'KHASH_INIT'
        static inline void kh_clear_##name(kh_##name##_t *h)                            \
                           ^
<scratch space>:54:1: note: expanded from here
kh_clear_s
^
index.c:35:1: warning: unused function 'kh_del_s' [-Wunused-function]
./khash.h:484:2: note: expanded from macro 'KHASH_MAP_INIT_STR'
        KHASH_INIT(name, kh_cstr_t, khval_t, 1, kh_str_hash_func, kh_str_hash_equal)
        ^
./khash.h:259:21: note: expanded from macro 'KHASH_INIT'
        static inline void kh_del_##name(kh_##name##_t *h, khint_t x)           \
                           ^
<scratch space>:68:1: note: expanded from here
kh_del_s
^
1 warning generated.
gcc -g -Wall -O2 -fPIC  -o bgzip bgzip.o bgzf.o knetfile.o -lz
2 warnings generated.
4 warnings generated.
ar -csru libtabix.a bgzf.o kstring.o knetfile.o index.o bedidx.o
gcc -g -Wall -O2 -fPIC  -o tabix main.o -L. -ltabix -lm  -lz
/bin/rm -rf /sw/build.build/root-tabix-0.2.6-1
/bin/mkdir -p /sw/build.build/root-tabix-0.2.6-1/sw
/bin/mkdir -p /sw/build.build/root-tabix-0.2.6-1/DEBIAN
/usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-tabix-0.2.6-1
sudo -u fink-bld [ENV] sh -c /tmp/fink.hcIzM
/tmp/fink.NO33I
#!/bin/sh -ev
	mkdir -p /sw/build.build/root-tabix-0.2.6-1/sw/bin
		install -m 0755 tabix /sw/build.build/root-tabix-0.2.6-1/sw/bin
	mkdir -p /sw/build.build/root-tabix-0.2.6-1/sw/share/man/man1
		install -m 0644 tabix.1 /sw/build.build/root-tabix-0.2.6-1/sw/share/man/man1
	mkdir -p /sw/build.build/root-tabix-0.2.6-1/sw/share/tabix/examples
		install -m 0644 example.gtf.gz* /sw/build.build/root-tabix-0.2.6-1/sw/share/tabix/examples
sudo -u fink-bld [ENV] sh -c /tmp/fink.BURVD
/usr/bin/install -d -m 700 /sw/build.build/root-tabix-0.2.6-1/sw/share/doc/tabix
/bin/cp -r ChangeLog /sw/build.build/root-tabix-0.2.6-1/sw/share/doc/tabix/
/bin/cp -r NEWS /sw/build.build/root-tabix-0.2.6-1/sw/share/doc/tabix/
/bin/cp -r tabix.tex /sw/build.build/root-tabix-0.2.6-1/sw/share/doc/tabix/
/bin/chmod -R go=u-w /sw/build.build/root-tabix-0.2.6-1/sw/share/doc/tabix
/bin/rm -f /sw/build.build/root-tabix-0.2.6-1/sw/info/dir /sw/build.build/root-tabix-0.2.6-1/sw/info/dir.old /sw/build.build/root-tabix-0.2.6-1/sw/share/info/dir /sw/build.build/root-tabix-0.2.6-1/sw/share/info/dir.old
Reverting ownership of install dir to root
Writing control file...
Writing md5sums file...
env LANG=C LC_ALL=C dpkg-deb -b root-tabix-0.2.6-1 /sw/fink/10.9/stable/main/binary-darwin-x86_64/sci
dpkg-deb: building package `tabix' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/sci/tabix_0.2.6-1_darwin-x86_64.deb'.
Removing runtime build-lock...
Removing build-lock package...
/sw/bin/dpkg-lockwait -r fink-buildlock-tabix-0.2.6-1
(Reading database ... 4741 files and directories currently installed.)
Removing fink-buildlock-tabix-0.2.6-1 ...